Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDC37L1 Gene 0 36.45 94.68 32.01 31.76 37.76 30.59 21.40 38.05 37.41 49.87 28.70 51.63 42.79 29.28 39.43 25.64 23.67 15.41 13.25 35.87 15.09 46.33 20.99 2 381858 Transcript 0 1.76 8.41 2.77 5.61 7.35 2.53 1.28 2.49 2.79 3.53 1.87 7.52 4.37 1.24 0.97 2.46 2.28 0.38 0.85 2.96 0.91 3.46 1.62 3 381854 Transcript 0 47.23 170.26 43.34 31.80 54.73 37.03 24.81 50.82 51.56 59.64 41.45 91.23 77.28 36.81 56.54 33.81 25.48 8.62 11.74 36.42 7.21 59.29 22.89 4 381845 Transcript 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.72 0.00 0.38 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 5 479095 Transcript 0 4.59 3.49 9.23 4.76 4.00 2.66 6.58 10.91 3.87 4.79 1.48 8.03 3.98 2.82 2.57 5.25 3.17 0.37 4.35 6.78 0.93 3.15 2.15 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 1 8.15 3.71 3.40 3.70 4.38 10.96 5.33 4.06 3.44 15.90 14.13 1.95 0.00 5.36 22.63 18.13 4.66 12.01 2.19 5.69 19.20 13.07 27.16 8 E1_Ac KnownBoundary 0 36.01 2.70 7.45 10.79 4.33 7.15 10.51 16.10 15.54 32.48 21.74 0.00 0.00 10.12 15.08 42.89 9.54 35.28 19.20 8.50 38.98 39.99 78.28 9 ER1c ExonRegion 0 9.32 10.08 5.36 5.51 5.93 10.42 4.45 8.64 10.22 22.01 16.95 0.00 12.03 11.25 12.70 22.40 12.06 16.07 15.28 13.23 17.66 18.12 28.86 10 E1_Ad KnownBoundary 0 2.82 5.33 5.23 8.62 7.13 16.35 3.36 7.48 7.03 30.17 2.32 0.00 0.00 6.65 4.45 3.59 12.44 6.88 4.71 2.81 19.58 5.14 6.83 11 ER1d ExonRegion 0 1.98 5.32 11.71 10.31 2.09 8.58 3.56 17.49 19.60 37.09 26.76 8.59 16.16 37.23 32.81 43.24 20.00 40.58 14.13 24.04 37.75 28.56 31.62 12 E1a_E2a KnownJunction 0 14.37 22.76 21.38 13.78 3.99 27.20 8.08 25.42 34.23 40.86 31.85 11.85 26.30 91.53 38.57 58.10 58.34 76.19 11.95 59.06 32.74 28.96 25.01 13 ER2a ExonRegion 0 35.66 99.59 43.19 34.64 29.12 36.37 22.69 60.58 57.35 68.52 77.59 52.23 78.30 95.74 79.89 82.88 78.89 67.16 28.72 70.85 79.52 66.14 56.79 14 E2_Da KnownBoundary 0 18.30 11.77 6.68 10.85 8.32 0.00 10.51 10.84 5.38 3.68 4.74 12.60 6.82 5.36 4.45 11.02 0.00 1.78 17.88 14.76 5.62 3.12 7.68 15 E2a_E3a KnownJunction 1 58.75 163.26 48.61 54.54 77.33 58.21 26.94 60.87 66.64 72.58 74.49 83.28 177.91 108.66 99.39 108.18 64.14 56.50 20.14 81.11 44.67 109.18 54.38 16 ER2b ExonRegion 0 4.59 3.49 9.23 4.76 4.00 2.66 6.58 10.91 3.87 4.79 1.48 8.03 3.98 2.82 2.57 5.25 3.17 0.37 4.35 6.78 0.93 3.15 2.15 17 E2_Db NovelBoundary 0 0.00 6.51 6.27 8.69 8.57 0.00 10.69 14.25 5.82 8.84 0.00 6.30 6.82 4.77 0.00 16.83 0.00 0.00 4.61 10.74 2.35 0.00 8.02 18 I2_SR1 SilentIntronRegion 0 10.76 0.00 3.17 0.76 5.43 0.20 1.77 1.78 3.02 0.99 0.00 0.00 3.39 0.00 2.18 4.21 2.38 2.62 1.42 4.73 1.47 0.23 1.14 19 ER3a ExonRegion 0 41.02 171.43 50.74 49.14 86.96 58.21 46.27 80.47 64.74 93.06 73.33 147.75 144.34 86.89 98.03 68.52 61.73 27.85 30.06 79.74 27.55 117.65 48.49 20 E3a_E4a KnownJunction 0 54.97 200.23 41.19 62.10 122.75 47.36 58.74 88.80 80.64 92.06 46.06 126.19 140.41 48.38 94.69 68.79 44.69 26.57 8.09 92.81 20.39 88.48 30.56 21 ER4a ExonRegion 0 57.11 164.72 42.30 47.76 77.50 56.71 49.23 87.05 67.95 92.88 83.48 168.03 185.46 71.36 98.37 64.26 58.88 26.71 21.01 81.57 21.81 119.75 51.04 22 E4a_E5a KnownJunction 0 79.35 219.04 56.71 46.51 77.33 52.02 44.38 87.57 77.66 104.73 88.81 165.05 149.34 78.40 112.62 86.05 76.76 15.50 25.79 97.35 41.70 135.82 105.42 23 ER5a ExonRegion 0 64.49 179.50 47.44 46.84 84.12 63.85 39.98 65.84 78.90 89.07 84.76 131.43 122.28 67.04 91.21 58.40 65.59 23.60 29.65 72.29 29.47 106.73 49.09 24 E5a_E6a KnownJunction 0 75.64 149.18 44.62 37.09 141.43 75.52 36.52 43.21 75.58 73.71 80.28 160.85 90.74 60.45 147.60 41.44 68.54 13.31 17.79 57.72 36.14 78.93 43.02 25 I5 Intron 0 9.08 7.55 7.68 8.07 7.17 4.86 5.42 8.24 8.37 6.55 4.06 16.66 11.75 5.80 5.77 5.05 5.51 2.07 1.93 5.15 1.27 6.00 2.62 26 I5_SR1 SilentIntronRegion 0 9.09 7.56 7.69 8.08 7.17 4.86 5.42 8.24 8.38 6.55 4.07 16.67 11.76 5.81 5.78 5.06 5.52 2.07 1.93 5.15 1.27 6.01 2.62 27 E6_Aa NovelBoundary 0 3.78 0.00 11.95 9.26 22.24 0.00 4.46 11.38 7.67 3.73 0.00 0.00 7.95 5.36 0.00 11.62 3.74 2.11 0.00 8.95 0.00 3.12 0.00 28 ER6a ExonRegion 0 70.63 165.41 68.12 47.92 62.48 55.28 29.48 71.75 86.72 86.99 79.87 157.67 90.76 68.68 99.43 54.72 53.41 18.32 30.97 64.41 19.31 118.94 46.68 29 E6_Da NovelBoundary 1 3.78 6.25 26.14 15.05 8.66 0.00 10.29 21.15 36.72 12.46 5.16 18.61 19.64 0.00 24.48 20.08 0.00 0.00 0.00 11.70 10.56 25.17 3.24 30 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E6a_E9a KnownJunction 0 52.38 233.25 52.72 27.57 68.25 41.85 26.76 64.98 66.61 68.63 64.81 137.59 122.88 55.39 81.46 53.15 36.19 8.58 13.08 40.78 8.09 77.83 32.52 32 I6 Intron 0 23.36 11.52 1.63 6.06 12.77 4.38 10.27 3.84 1.10 1.53 3.46 14.05 8.56 2.62 10.33 6.20 0.98 1.65 1.90 7.61 0.00 22.99 8.76 33 I6_SR1 SilentIntronRegion 0 23.49 11.59 1.64 6.09 12.84 4.40 10.33 3.86 1.10 1.54 3.48 14.13 8.61 2.64 10.39 6.24 0.99 1.66 1.91 7.66 0.00 23.13 8.81 34 ER7a ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.72 0.00 0.38 0.00 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 35 I7 Intron 0 17.75 17.74 8.58 6.81 10.77 4.92 7.55 6.05 7.41 9.75 3.89 13.42 6.29 6.19 4.01 9.97 7.75 4.32 3.21 5.71 5.92 5.59 7.88 36 I7_SR1 SilentIntronRegion 0 17.76 18.95 11.30 8.98 12.07 3.92 4.98 7.83 7.40 10.90 3.65 13.38 6.94 6.61 3.51 11.09 11.78 5.40 4.87 6.79 6.19 7.54 8.75 37 I7_AR1 ActiveIntronRegion 0 18.09 15.71 3.41 2.70 8.45 6.98 12.75 2.64 7.56 7.69 4.43 13.75 5.15 5.48 5.06 7.98 0.00 2.28 0.00 3.71 5.49 1.88 6.33 38 E8_Aa NovelBoundary 0 32.67 35.91 13.75 25.14 36.16 15.10 22.66 29.61 23.32 15.69 0.00 26.26 8.28 11.95 16.81 8.12 4.77 6.38 4.61 6.26 5.50 8.76 17.24 39 ER8a ExonRegion 0 5.27 25.23 8.31 16.83 22.06 7.60 3.84 7.48 8.36 10.59 5.61 22.56 13.12 3.72 2.90 7.39 6.84 1.14 2.56 8.89 2.74 10.37 4.87 40 E8_Da NovelBoundary 0 7.19 20.72 27.05 36.76 32.60 14.48 25.88 28.75 24.65 24.42 4.79 25.81 0.00 12.24 0.00 8.54 0.00 2.28 0.00 9.52 3.15 15.12 12.12 41 I8 Intron 0 17.57 20.98 9.73 12.36 19.58 10.40 9.93 15.14 15.32 13.60 7.20 17.90 17.12 7.22 6.16 7.41 5.74 2.57 4.52 8.90 4.13 18.01 6.65 42 I8_AR1 ActiveIntronRegion 0 14.31 18.39 9.24 12.70 17.12 9.41 8.36 15.64 14.45 12.53 8.46 15.77 16.67 7.78 4.22 7.17 5.55 2.02 4.25 8.91 3.48 17.17 7.84 43 I8_SR1 SilentIntronRegion 0 13.50 19.31 9.90 13.45 22.13 14.19 12.24 15.89 15.37 15.44 10.15 19.65 21.68 8.58 8.02 10.53 11.90 6.34 4.80 7.91 8.81 18.90 7.28 44 I8_AR2 ActiveIntronRegion 0 18.06 19.69 9.07 10.51 24.72 9.37 10.12 12.17 15.49 15.29 4.72 22.46 16.40 5.79 5.73 6.72 3.00 1.75 3.81 7.55 3.79 15.79 5.76 45 I8_SR2 SilentIntronRegion 0 24.16 27.53 9.42 14.38 16.66 13.15 12.36 17.26 19.66 12.60 3.75 15.71 17.70 6.61 8.88 6.00 2.70 2.03 4.53 11.89 1.82 21.31 4.34 46 I8_AR3 ActiveIntronRegion 0 44.61 40.89 17.89 7.95 20.99 4.50 10.39 15.16 11.73 13.41 4.74 19.36 7.58 5.06 13.81 5.83 6.47 0.00 9.37 10.43 2.16 24.52 2.88 47 E9_Aa NovelBoundary 0 53.05 89.26 17.65 13.85 47.20 2.84 18.86 9.20 14.93 17.89 2.16 0.00 27.27 11.95 25.47 7.69 4.39 0.00 4.61 12.14 3.15 8.14 16.05 48 ER9a ExonRegion 0 42.08 107.28 33.97 36.04 41.21 32.22 22.85 36.65 36.50 50.65 18.10 44.87 31.68 18.24 31.62 14.47 14.77 8.66 10.40 32.06 6.32 40.76 13.25 49 IG37 Intergenic 0 17.22 9.12 5.61 5.90 10.07 12.54 5.24 11.48 5.81 7.47 10.81 17.08 16.82 6.95 9.49 8.14 6.30 3.23 5.73 7.54 2.32 3.92 2.19 50 IG37_AR1 ActiveIntergenicRegion 0 17.74 11.47 8.84 9.33 19.35 11.11 8.28 15.42 9.15 12.71 13.46 32.16 25.89 6.99 13.14 10.09 7.36 1.82 5.50 11.82 0.56 7.59 2.14 51 IG37_AR2 ActiveIntergenicRegion 0 48.78 14.19 18.30 12.80 22.65 28.83 6.65 34.49 19.02 18.67 28.63 42.49 72.75 12.01 26.99 25.64 7.83 9.45 20.89 24.99 0.61 15.99 4.17 52 IG37_SR3 SilentIntergenicRegion 0 40.37 14.70 9.77 7.38 16.60 33.97 7.43 23.74 9.80 11.87 24.64 18.76 16.36 16.00 16.88 16.13 9.93 9.54 11.69 10.71 6.75 6.93 4.94 53 IG37_AR3 ActiveIntergenicRegion 0 13.52 8.56 3.74 3.52 0.66 8.69 1.69 14.66 4.23 9.93 8.03 10.18 14.98 6.88 10.29 3.94 2.27 1.66 5.05 8.15 4.78 3.65 3.70