Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IFT74 Gene 0 34.89 40.25 22.62 20.24 31.43 24.53 23.77 21.24 28.83 19.33 47.16 69.03 110.92 49.02 57.44 40.82 89.43 10.00 17.34 18.91 17.01 38.62 19.90 2 433700 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 1.16 0.00 0.45 0.00 0.00 0.00 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 443698 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.71 0.99 0.00 0.00 0.98 2.49 1.95 2.67 2.83 0.00 0.32 1.73 0.00 2.17 4 429045 Transcript 0 1.35 6.53 3.44 1.91 3.25 2.13 1.88 1.14 1.24 2.71 6.18 4.10 10.30 5.50 3.47 4.50 19.65 1.69 6.03 3.56 0.22 5.58 3.01 5 380062 Transcript 0 2.12 3.25 0.00 0.00 6.42 0.00 5.83 0.00 2.47 0.00 0.39 5.20 0.94 1.30 4.06 4.76 0.00 0.00 2.55 2.13 0.00 0.00 0.00 6 494236 Transcript 0 8.45 6.48 3.35 4.02 7.07 5.97 8.28 3.12 6.45 4.57 4.74 5.84 5.26 5.21 14.05 7.92 3.88 4.55 9.74 8.00 3.53 1.12 5.31 7 482986 Transcript 0 3.19 4.55 3.12 1.26 5.03 3.70 8.20 2.07 12.14 2.16 0.83 1.43 3.87 1.13 2.30 6.59 2.29 0.47 0.99 1.41 0.07 2.72 0.12 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.00 1.08 0.00 0.89 0.00 0.00 0.00 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Da NovelBoundary 0 6.74 45.78 12.60 9.16 10.78 35.09 26.54 4.35 6.25 38.92 35.38 17.26 24.19 52.39 62.30 96.30 72.74 118.43 47.81 53.82 37.13 16.35 67.27 10 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E2_Aa NovelBoundary 0 0.00 0.00 0.00 5.26 0.00 2.33 0.00 4.23 2.86 8.86 9.74 0.00 0.00 4.94 15.20 3.67 22.91 1.70 0.00 14.45 11.18 0.00 0.00 12 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.13 1.98 0.00 0.00 1.96 0.15 0.23 0.56 1.18 0.00 0.64 0.36 0.00 0.50 13 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.77 1.29 0.00 0.00 0.00 0.00 4.82 3.67 4.77 4.48 0.00 0.00 3.09 0.00 3.84 14 ER3a ExonRegion 0 0.00 4.27 0.00 0.85 1.81 0.00 0.00 0.00 0.22 0.00 0.43 0.00 0.00 0.16 1.45 1.04 4.54 0.18 0.00 1.33 0.00 0.00 0.00 15 E3_Ab KnownBoundary 0 0.00 9.87 0.00 1.53 9.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 3.76 8.60 0.00 0.00 3.26 0.00 3.12 4.35 16 ER3b ExonRegion 1 40.30 40.81 9.10 9.20 26.45 34.77 23.07 6.02 14.67 12.16 42.62 0.00 3.47 44.26 36.04 106.63 92.01 37.45 27.90 14.18 53.72 49.50 50.74 17 E3a_E4a KnownJunction 0 13.26 20.06 12.71 7.76 12.39 11.02 3.80 1.97 15.89 5.91 6.90 0.00 25.49 2.47 15.20 16.58 47.50 21.80 3.58 6.52 13.22 13.72 10.76 18 ER4a ExonRegion 0 9.59 21.65 10.40 8.70 3.66 9.42 7.11 8.02 21.29 16.73 50.16 13.83 20.78 54.34 39.24 78.43 135.79 24.78 22.46 18.49 65.40 34.63 38.22 19 E4a_E5a KnownJunction 0 3.04 38.22 10.47 14.25 15.28 5.56 17.31 13.35 29.86 18.86 34.38 18.46 60.55 102.77 97.41 152.18 93.03 50.20 18.54 14.45 37.75 69.13 66.07 20 ER5a ExonRegion 0 5.93 48.90 13.48 13.58 37.99 42.08 30.84 17.78 25.47 18.61 49.45 35.15 72.59 78.63 51.84 59.92 105.46 27.25 9.86 21.95 37.95 33.18 38.57 21 E5_Da NovelBoundary 0 3.78 6.12 0.00 4.56 0.00 0.00 9.67 2.51 7.15 1.61 2.26 0.00 0.00 2.88 0.00 0.00 0.00 1.70 18.35 0.00 2.47 3.00 8.45 22 E5a_E6a KnownJunction 0 24.30 89.13 15.94 16.22 19.78 19.14 11.44 16.92 42.48 25.33 71.86 67.07 113.95 104.89 64.90 43.58 145.21 3.81 17.79 27.87 34.53 47.46 21.17 23 E6_Aa NovelBoundary 0 0.00 24.07 0.00 3.60 0.00 0.00 0.00 5.75 3.41 8.89 2.47 0.00 0.00 0.00 9.27 7.78 0.00 0.00 0.00 0.00 0.00 2.39 0.00 24 ER6a ExonRegion 0 22.81 79.35 14.33 28.82 13.38 21.48 9.51 17.04 38.34 22.84 88.16 92.77 98.59 95.49 67.14 49.49 146.38 9.58 13.39 38.56 31.62 59.44 29.01 25 E6a_E7b KnownJunction 0 23.12 89.59 16.23 40.45 8.66 22.43 24.60 15.07 28.88 19.13 96.08 99.33 105.84 81.05 44.50 55.11 107.62 15.42 8.94 43.02 22.55 54.80 22.28 26 E7_Aa NovelBoundary 1 228.34 208.78 106.56 93.83 207.56 99.09 259.50 77.88 80.00 70.00 123.40 41.56 92.85 36.26 157.74 269.07 180.64 116.98 123.77 153.72 78.02 79.97 184.81 27 ER7a ExonRegion 0 8.45 6.48 3.35 4.02 7.07 5.97 8.28 3.12 6.45 4.57 4.74 5.84 5.26 5.21 14.05 7.92 3.88 4.55 9.74 8.00 3.53 1.12 5.31 28 E7_Ab KnownBoundary 0 7.04 10.72 5.44 4.00 0.00 0.00 1.94 4.81 1.48 7.36 2.58 0.00 0.00 0.00 0.00 0.00 0.00 4.77 4.80 0.00 0.00 0.00 0.00 29 ER7b ExonRegion 0 55.57 96.26 23.19 30.29 28.23 35.03 34.23 32.40 41.05 30.42 73.67 74.35 169.85 95.97 65.57 44.28 108.39 16.20 15.44 35.95 20.91 51.49 24.36 30 E7a_E8a KnownJunction 0 56.82 98.73 31.16 40.12 53.06 31.29 42.62 16.80 42.91 37.04 60.86 68.27 161.84 81.82 58.35 35.55 96.40 7.75 11.67 24.35 11.80 52.05 15.79 31 ER8a ExonRegion 0 49.06 105.81 24.53 25.92 39.57 29.82 29.95 17.23 34.66 30.21 76.18 112.35 221.74 81.42 63.35 62.07 131.71 11.27 15.93 43.18 15.43 59.19 41.35 32 E8a_E9a KnownJunction 0 30.82 104.65 20.87 11.79 37.01 31.52 22.35 23.25 37.53 26.54 74.76 169.86 234.40 50.74 61.44 34.86 121.65 12.89 13.18 45.06 16.31 65.27 18.52 33 ER9a ExonRegion 0 35.98 76.86 25.86 19.22 27.96 21.18 24.33 27.71 38.59 30.33 64.52 155.71 242.26 66.03 53.92 43.86 98.57 12.23 14.17 50.40 14.29 73.35 9.42 34 E9b_E10a KnownJunction 0 44.30 69.33 40.74 45.78 40.32 12.49 21.15 36.60 59.58 40.05 88.76 99.63 242.84 92.53 86.66 75.54 194.67 13.14 38.68 35.67 8.53 80.34 27.83 35 ER9b ExonRegion 0 42.19 62.52 33.24 30.99 29.35 13.90 23.75 32.12 55.98 37.29 78.38 131.28 238.13 91.42 74.31 66.25 135.23 12.46 23.53 46.26 11.16 77.56 15.16 36 ER10a ExonRegion 0 40.90 58.28 40.73 39.70 41.91 26.92 36.17 35.32 49.40 44.23 81.96 126.53 272.70 91.68 80.63 46.74 201.04 11.77 23.48 39.74 20.72 66.64 37.09 37 E10a_E11a KnownJunction 0 54.23 58.34 40.06 39.76 44.23 25.72 51.27 40.09 34.84 36.99 76.02 130.54 336.34 74.46 76.77 61.78 114.07 10.86 22.02 39.63 14.39 54.31 28.68 38 ER11a ExonRegion 0 39.70 94.13 33.28 38.86 71.07 62.92 57.05 39.89 54.48 34.61 92.60 168.97 352.60 98.43 95.87 101.61 156.28 16.88 27.68 35.79 14.60 71.21 35.22 39 E11a_E12a KnownJunction 0 53.64 94.79 39.06 48.01 100.25 73.65 35.07 64.98 59.06 24.42 114.13 158.60 282.12 120.49 138.20 82.54 180.46 9.91 24.66 42.12 28.66 47.27 26.46 40 ER12a ExonRegion 0 44.58 79.54 39.41 41.17 55.55 37.37 33.37 59.84 48.44 27.20 94.37 164.11 259.07 108.09 87.27 76.95 169.60 9.36 40.95 30.02 29.28 57.94 31.70 41 E12a_E13a KnownJunction 0 81.20 126.49 39.03 50.81 66.55 34.24 45.31 51.51 46.24 36.64 93.08 217.87 335.53 159.57 127.08 94.76 193.64 19.90 62.03 26.65 37.00 101.40 49.51 42 ER13a ExonRegion 0 39.63 79.38 39.25 42.16 51.77 37.41 40.55 46.92 43.97 27.83 79.65 183.61 249.84 107.27 104.24 93.68 167.77 10.09 28.03 33.35 31.11 67.53 40.56 43 E13a_E14a KnownJunction 0 115.87 152.28 45.39 36.79 130.22 64.05 117.91 35.86 35.45 38.87 115.45 186.36 193.33 84.88 68.98 71.09 170.27 10.45 37.08 29.79 31.32 82.48 28.43 44 ER14a ExonRegion 0 70.26 102.67 47.55 35.40 77.01 61.01 67.91 36.72 32.14 29.37 94.85 138.54 162.89 82.32 64.32 54.37 174.30 10.86 51.51 31.86 23.97 69.92 28.51 45 E14a_E15b KnownJunction 0 47.71 89.59 44.50 35.39 43.63 63.09 35.51 29.12 26.74 17.22 76.28 111.04 168.17 73.11 99.02 45.71 185.32 8.42 49.88 33.94 11.31 60.56 15.28 46 ER15a ExonRegion 0 3.19 4.55 3.12 1.26 5.03 3.70 8.20 2.07 12.14 2.16 0.83 1.43 3.87 1.13 2.30 6.59 2.29 0.47 0.99 1.41 0.07 2.72 0.12 47 E15_Ab KnownBoundary 0 0.00 0.00 1.66 1.70 7.72 5.05 5.96 1.64 12.12 3.33 0.00 0.00 0.00 2.47 4.45 8.20 0.00 0.00 0.00 3.26 0.00 0.00 0.00 48 ER15b ExonRegion 0 58.24 61.32 58.54 50.70 60.29 55.34 45.10 44.94 60.32 40.40 79.47 130.05 224.17 100.43 118.80 81.94 176.70 16.26 36.25 46.14 20.87 87.03 54.27 49 E15a_E16a KnownJunction 0 0.00 8.62 5.14 2.06 4.16 2.78 0.00 0.00 0.00 4.14 10.11 0.00 13.64 9.59 4.45 3.67 31.51 2.32 9.60 3.26 0.00 11.82 3.33 50 E15a_E17a KnownJunction 0 80.38 45.19 58.81 50.11 59.93 41.96 23.94 48.47 70.49 40.45 68.28 149.00 231.97 96.00 171.33 73.06 164.28 17.16 30.87 48.83 22.43 91.54 39.27 51 ER16a ExonRegion 0 4.04 6.70 5.19 2.82 3.79 3.60 5.64 3.41 3.51 3.99 7.99 12.31 17.26 6.73 4.50 8.80 22.91 2.57 8.49 6.10 0.65 4.92 5.71 52 E16_Da NovelBoundary 0 2.96 2.57 2.99 1.27 7.13 8.69 16.21 2.42 4.28 1.29 7.32 24.31 24.35 2.12 5.19 0.00 4.77 1.99 4.05 2.36 0.00 3.12 0.00 53 I16_AR2 ActiveIntronRegion 0 12.87 8.56 4.27 2.85 1.25 0.57 4.13 2.01 5.17 5.33 5.73 6.08 8.09 4.57 8.14 6.95 9.27 5.87 4.97 2.99 2.06 3.90 6.41 54 ER17a ExonRegion 0 59.22 60.14 45.79 46.51 51.83 45.91 27.04 41.51 68.91 34.98 93.71 213.19 269.33 85.15 132.11 53.55 190.11 14.47 37.87 37.98 31.30 82.45 36.49 55 E17a_E18a KnownJunction 0 73.35 99.92 34.03 55.87 89.05 73.93 48.09 30.64 63.11 35.48 117.82 229.87 263.29 70.63 81.83 61.78 238.43 4.64 53.84 38.41 41.08 74.03 7.17 56 ER18a ExonRegion 0 80.00 88.34 50.38 44.31 57.58 55.44 48.49 38.96 55.08 37.36 94.02 169.38 234.60 73.18 101.31 58.02 203.71 15.67 30.26 35.28 37.04 63.50 24.33 57 E18a_E19a KnownJunction 0 284.94 107.15 39.32 52.87 65.96 34.70 54.85 44.61 59.52 43.09 71.60 169.86 245.44 89.41 88.88 58.02 200.84 29.35 22.68 15.15 27.55 65.89 24.33 58 ER19a ExonRegion 0 139.27 82.56 48.23 46.71 89.50 46.49 45.46 42.74 62.35 38.80 109.94 177.51 279.15 93.28 134.08 68.26 198.03 16.56 28.31 34.67 39.31 73.21 27.60 59 E19b_E20a KnownJunction 1 85.42 84.66 74.89 47.18 51.36 48.27 12.63 51.10 55.67 43.68 77.60 171.51 285.53 92.59 232.77 113.99 173.54 15.01 55.91 29.02 25.95 96.32 39.35 60 ER19b ExonRegion 0 66.67 67.11 67.40 47.02 53.51 37.59 15.89 50.13 59.90 40.14 78.28 171.01 302.51 95.01 176.98 93.62 161.74 16.63 38.22 22.34 26.44 76.05 41.11 61 ER20a ExonRegion 0 62.06 59.33 61.37 47.93 87.39 58.68 50.21 50.06 69.29 39.32 79.84 155.73 225.92 88.10 118.05 52.79 140.07 11.83 26.96 22.15 17.97 68.96 24.10 62 E20a_E21a KnownJunction 1 145.73 115.83 94.41 65.03 141.17 72.52 68.23 57.71 85.16 39.43 96.08 192.21 313.13 72.99 187.28 110.65 142.87 19.65 75.39 22.12 17.67 112.18 50.36 63 ER21a ExonRegion 0 94.49 66.32 58.76 44.69 57.93 41.07 40.39 50.69 58.04 33.90 78.94 115.69 204.31 74.85 128.07 57.93 142.31 11.41 26.92 19.20 11.82 78.51 28.08 64 E21a_E22a KnownJunction 0 79.79 73.74 53.04 41.35 36.33 55.20 47.43 55.94 48.35 21.84 93.97 105.93 195.93 72.16 122.75 37.85 105.19 10.28 9.60 24.22 11.18 41.70 27.83 65 ER22a ExonRegion 1 101.66 46.97 42.37 24.60 58.38 34.00 39.78 38.88 46.63 26.79 84.13 81.27 133.24 54.50 134.88 40.83 151.30 8.69 33.05 19.88 12.57 68.76 17.48 66 E22_Da NovelBoundary 0 33.12 9.60 18.30 4.00 7.56 0.00 4.50 6.78 9.32 8.27 2.32 13.05 25.81 0.00 0.00 3.16 3.93 0.00 0.00 2.75 0.00 5.20 4.35 67 E22a_E23a KnownJunction 1 315.76 43.48 41.81 21.58 113.16 29.19 73.35 26.12 52.55 34.30 67.60 97.38 150.31 66.87 168.86 29.14 179.80 1.82 34.26 18.41 18.35 125.96 22.19 68 I22 Intron 0 10.72 11.15 7.39 5.40 9.14 4.33 7.26 5.76 4.66 4.69 4.32 6.08 8.53 5.29 7.49 5.01 7.80 1.70 2.96 5.47 2.23 3.16 2.73 69 I22_AR1 ActiveIntronRegion 0 16.56 4.13 8.29 3.61 0.55 0.00 7.13 4.68 4.94 3.64 0.28 5.60 6.90 13.14 9.81 16.70 18.06 3.32 3.19 3.44 7.65 2.21 7.34 70 I22_AR2 ActiveIntronRegion 0 9.14 14.77 7.10 6.76 10.97 8.07 9.71 7.95 6.48 2.75 1.90 15.33 10.30 4.89 5.28 5.92 17.24 2.24 3.29 2.55 8.44 5.74 5.95 71 I22_AR3 ActiveIntronRegion 0 11.21 11.56 11.28 10.64 10.68 6.49 12.44 8.37 9.20 6.79 12.81 7.72 10.52 9.16 12.27 9.72 14.52 6.20 5.25 9.66 3.89 4.01 4.96 72 I22_AR4 ActiveIntronRegion 1 18.13 23.17 14.28 6.64 23.50 9.81 16.12 5.79 4.67 3.29 10.25 2.82 4.69 1.77 12.24 4.91 7.46 3.70 2.91 10.73 2.11 2.08 2.94 73 I22_AR5 ActiveIntronRegion 0 14.17 17.76 12.00 8.57 14.19 4.70 9.95 7.79 7.04 6.84 5.82 4.84 7.12 6.20 9.55 5.58 5.30 0.41 2.46 9.83 1.22 3.25 2.92 74 E23_Aa NovelBoundary 0 13.04 41.83 26.14 11.82 25.81 7.95 20.67 14.79 9.09 10.61 11.79 0.00 19.97 5.47 11.00 4.10 7.95 0.00 19.20 11.25 0.00 0.00 4.35 75 ER23a ExonRegion 0 45.75 24.64 23.51 15.35 30.31 17.25 22.43 21.49 26.01 24.25 48.37 46.96 64.82 37.67 81.64 23.90 75.55 4.07 15.60 13.84 10.68 51.24 11.88 76 ER23b ExonRegion 0 2.12 3.25 0.00 0.00 6.42 0.00 5.83 0.00 2.47 0.00 0.39 5.20 0.94 1.30 4.06 4.76 0.00 0.00 2.55 2.13 0.00 0.00 0.00