Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA0020 Gene 0 112.52 150.64 99.21 71.23 92.84 73.51 54.29 45.24 25.33 90.51 256.55 359.16 253.06 280.42 236.74 186.60 235.46 48.66 54.69 81.71 85.69 155.01 87.46 2 397885 Transcript 0 172.61 226.20 113.59 86.36 126.16 101.00 79.86 54.71 32.79 111.78 310.80 458.96 327.13 365.56 285.81 209.76 283.67 54.87 60.83 103.32 95.20 183.65 105.29 3 469168 Transcript 0 24.65 39.17 20.29 18.88 23.05 13.30 14.04 10.46 8.99 15.04 37.32 74.23 27.60 30.69 25.66 31.33 42.38 5.62 5.62 17.94 5.63 29.14 14.57 4 382032 Transcript 0 10.73 6.24 3.95 2.50 2.98 0.93 4.72 3.70 1.30 2.99 7.49 8.84 4.95 7.39 9.60 5.86 4.51 1.28 2.47 4.73 3.23 7.01 2.15 5 490444 Transcript 0 6.69 5.83 6.37 3.91 4.46 2.57 4.38 4.15 1.89 6.63 23.71 22.64 6.89 18.40 19.15 11.89 18.35 3.69 4.44 5.47 9.55 9.78 7.44 6 IG25_AR1 ActiveIntergenicRegion 0 4.23 8.13 0.00 9.99 13.38 0.00 0.00 2.59 2.47 4.59 8.70 2.89 4.69 1.62 9.19 0.00 3.30 3.70 0.00 0.71 2.20 0.00 0.00 7 ER1a ExonRegion 0 46.27 51.99 10.72 9.69 52.05 59.58 33.52 5.69 3.22 11.29 38.19 4.07 16.19 44.01 30.50 31.25 43.38 6.71 5.50 13.76 17.67 14.18 22.81 8 E1a_E2a KnownJunction 1 486.01 593.12 110.23 87.67 520.71 517.83 347.03 34.87 27.92 99.39 387.05 35.11 77.43 403.15 248.84 293.34 419.63 71.76 29.84 142.73 148.02 121.30 232.44 9 ER2a ExonRegion 1 171.28 306.16 108.49 102.32 261.47 210.49 125.14 41.39 29.13 104.02 255.10 152.00 364.60 178.60 137.75 243.84 296.87 43.44 36.25 84.16 77.37 104.95 140.48 10 E2a_E3a KnownJunction 0 50.82 85.58 71.08 65.09 57.72 23.74 26.06 42.10 20.60 87.22 236.06 390.88 345.43 113.31 122.38 87.24 223.94 6.88 16.85 63.02 79.20 88.60 23.22 11 ER3a ExonRegion 0 57.22 169.83 164.22 146.82 226.43 172.67 115.61 65.18 33.46 139.31 393.04 551.87 503.14 345.29 215.49 279.78 371.10 58.04 75.87 138.50 145.02 177.06 150.93 12 E3a_E4a KnownJunction 1 223.37 679.94 133.38 127.89 178.01 175.01 174.93 49.29 32.35 114.46 282.76 793.76 370.92 453.35 270.85 217.46 303.69 33.45 50.73 100.03 122.94 186.09 112.34 13 ER4a ExonRegion 0 180.90 311.39 119.81 120.14 91.76 57.56 69.01 54.68 32.09 120.33 329.47 796.18 461.14 428.47 212.58 190.00 340.11 31.21 67.31 107.52 127.51 197.21 96.33 14 E4a_E5a KnownJunction 1 246.71 288.04 147.42 145.74 95.42 24.36 56.35 58.37 50.90 130.33 309.60 934.80 482.76 431.58 196.92 177.73 344.46 14.01 92.80 105.21 92.05 232.81 127.62 15 ER5a ExonRegion 0 197.23 211.81 122.23 122.25 73.02 48.14 55.03 69.46 40.48 133.67 416.72 958.41 590.02 404.60 223.70 208.71 354.46 18.94 68.44 115.23 76.49 265.35 96.64 16 E5a_E6a KnownJunction 1 159.51 225.22 116.79 129.42 75.21 63.77 70.88 67.28 41.00 144.38 368.72 881.39 498.51 405.44 213.98 102.20 316.41 18.90 66.45 110.13 62.09 233.30 65.73 17 ER6a ExonRegion 1 118.59 241.67 113.31 116.60 105.18 71.56 83.13 65.64 41.01 119.97 345.13 924.99 544.54 375.69 230.62 205.36 276.50 51.38 41.10 99.61 53.31 211.08 83.66 18 E6a_E7a KnownJunction 0 182.33 301.26 118.95 113.87 162.56 107.67 120.48 72.54 57.73 149.33 449.43 764.50 553.21 362.30 309.66 235.15 307.34 62.93 55.25 134.74 88.71 212.91 87.84 19 ER7a ExonRegion 0 99.67 254.83 111.80 113.99 111.34 74.09 95.82 65.04 42.88 142.03 396.82 839.46 563.50 414.83 298.83 230.27 318.91 58.82 64.09 123.94 98.08 269.77 81.74 20 E7a_E8a KnownJunction 1 106.76 296.07 122.26 124.49 120.03 44.35 105.02 55.74 46.87 142.53 384.52 988.97 602.56 497.44 287.04 181.15 275.46 64.87 49.79 119.72 98.41 245.49 87.16 21 E8_Ab NovelBoundary 1 92.76 195.16 89.68 100.62 64.94 53.15 72.43 45.47 34.52 110.27 254.91 837.87 547.53 412.98 226.96 215.50 275.74 60.15 61.18 92.81 96.87 156.82 105.42 22 ER8a ExonRegion 1 92.60 230.22 107.68 108.63 98.45 50.51 81.26 54.95 42.97 133.76 363.22 961.14 607.16 478.98 264.26 219.07 291.99 67.06 63.57 109.84 105.59 232.57 102.29 23 ER8b ExonRegion 0 77.85 223.24 119.93 106.75 81.99 60.53 50.39 46.42 41.18 128.28 374.42 682.31 423.31 423.13 299.16 337.25 349.44 105.98 92.29 113.51 156.14 269.51 133.00 24 E8a_E9a KnownJunction 0 77.72 203.12 178.23 115.24 90.75 75.01 35.77 53.48 34.11 132.78 453.75 627.50 582.75 354.00 284.94 314.02 404.58 103.63 82.73 122.02 148.70 224.97 121.81 25 ER9a ExonRegion 0 134.36 208.52 169.00 103.44 96.56 89.63 74.78 51.45 37.12 139.61 406.21 595.72 397.98 459.67 324.16 271.58 384.24 89.76 70.72 116.43 128.54 244.45 147.71 26 E9_Da KnownBoundary 0 25.12 45.52 23.80 17.21 28.18 5.28 12.98 8.26 13.14 16.22 35.85 36.46 53.73 38.55 32.14 60.41 58.81 11.86 18.73 11.95 19.15 25.23 23.99 27 E9a_E10a KnownJunction 0 134.39 140.57 164.93 99.75 106.20 127.37 93.54 48.30 49.33 112.07 313.08 406.93 282.12 425.75 321.78 186.28 347.45 118.02 76.90 117.93 93.72 166.98 133.25 28 ER9b ExonRegion 0 24.65 39.17 20.29 18.88 23.05 13.30 14.04 10.46 8.99 15.04 37.32 74.23 27.60 30.69 25.66 31.33 42.38 5.62 5.62 17.94 5.63 29.14 14.57 29 E9_Db NovelBoundary 0 20.45 32.76 25.72 26.84 19.35 13.57 20.67 33.02 18.84 25.01 49.54 90.78 19.80 51.74 31.89 20.68 32.07 1.82 0.00 34.64 2.90 52.54 15.11 30 I9 Intron 0 34.38 26.56 5.82 7.10 11.01 6.41 7.35 4.50 5.87 10.72 17.89 53.18 35.29 22.40 20.25 11.31 15.61 0.66 5.57 6.78 3.63 21.22 6.04 31 I9_SR1 SilentIntronRegion 0 39.76 30.70 6.73 8.21 12.72 7.41 8.50 5.21 6.78 12.39 20.68 61.49 40.80 25.90 23.17 13.08 18.05 0.77 6.44 7.84 4.19 24.54 6.98 32 E10_Aa NovelBoundary 0 68.38 51.44 14.46 19.15 28.35 7.78 14.40 6.78 12.07 26.81 27.22 31.36 35.55 47.21 32.51 38.96 29.36 2.28 8.85 14.57 13.53 20.39 0.00 33 ER10a ExonRegion 0 252.27 279.63 136.19 70.28 106.28 102.67 77.21 42.20 33.77 112.63 435.27 424.07 333.41 435.63 345.32 368.96 299.09 103.24 105.16 108.59 121.29 265.19 142.48 34 E10a_E11a KnownJunction 0 162.55 222.66 76.05 40.22 131.66 109.99 63.11 31.46 30.41 84.88 179.62 287.49 312.64 380.78 252.43 214.22 293.13 45.93 43.20 110.90 89.27 189.03 80.24 35 E11_Aa NovelBoundary 0 32.60 20.79 10.35 13.58 40.24 8.52 8.39 15.48 3.56 8.62 16.74 48.77 19.97 9.83 19.66 11.11 4.11 8.91 0.00 6.52 5.00 21.55 11.95 36 ER11a ExonRegion 0 100.82 160.92 87.47 50.94 66.41 56.44 26.76 34.24 27.10 90.20 168.06 286.84 263.54 326.02 272.13 159.50 239.30 28.28 31.37 95.04 84.81 139.41 71.04 37 E11a_E12a KnownJunction 0 145.14 170.82 117.06 70.09 49.15 86.31 24.07 68.35 35.45 102.53 291.18 180.66 157.94 434.17 284.20 198.67 139.04 50.90 52.80 115.88 87.79 181.62 147.34 38 ER12a ExonRegion 0 129.66 211.34 113.07 82.23 98.66 88.16 49.70 76.56 37.56 117.62 327.91 245.10 213.40 436.41 300.76 246.96 277.58 64.19 71.49 121.20 110.43 237.75 126.49 39 E12a_E13a KnownJunction 0 238.04 238.58 114.90 90.66 156.71 144.52 84.44 85.52 34.75 144.92 421.79 379.32 425.46 460.89 361.46 250.28 433.85 77.73 88.66 163.88 154.26 205.44 105.68 40 ER13a ExonRegion 0 142.93 164.22 84.46 54.97 107.79 86.64 56.23 48.59 24.31 105.76 278.41 184.40 257.08 303.85 344.75 207.57 258.86 51.33 58.16 87.50 71.66 160.59 85.38 41 E13a_E14a KnownJunction 0 217.15 188.85 118.42 73.18 128.10 83.59 72.16 77.67 32.18 127.81 285.07 220.12 243.65 306.79 446.01 214.30 220.57 46.34 59.11 112.69 33.61 219.89 98.77 42 ER14a ExonRegion 0 242.04 182.17 160.05 88.75 122.24 110.52 71.56 76.66 28.00 133.41 353.76 328.16 218.14 359.04 348.82 261.28 298.58 78.34 80.97 113.27 85.04 228.47 118.35 43 E14a_E15a KnownJunction 0 351.91 195.95 163.00 62.83 144.23 140.88 72.65 70.15 23.00 138.31 381.68 265.44 222.55 369.59 485.69 282.75 357.08 81.95 74.26 125.92 115.65 162.82 104.14 44 ER15a ExonRegion 0 154.30 138.58 141.21 61.92 84.82 84.93 47.34 56.84 23.60 108.89 290.48 305.26 165.41 408.78 391.93 259.83 278.33 97.35 84.35 101.13 132.42 170.99 105.27 45 E15a_E16a KnownJunction 1 166.62 135.11 114.63 44.45 125.38 59.57 57.81 36.02 27.29 98.74 309.66 211.72 79.70 432.16 370.11 264.38 288.55 107.94 78.97 65.07 90.69 167.23 120.79 46 ER16a ExonRegion 0 192.46 136.48 110.94 58.48 110.01 87.67 62.20 68.86 32.25 99.85 354.51 258.14 189.52 445.73 511.28 256.21 275.29 78.24 102.08 90.50 150.88 173.03 145.23 47 E16_Da NovelBoundary 0 0.00 0.00 5.14 2.06 0.00 0.00 0.00 1.73 17.85 4.30 0.00 18.61 52.92 0.00 0.00 0.00 4.58 0.00 4.80 6.07 3.15 0.00 3.84 48 E16a_E17b KnownJunction 0 292.20 191.08 135.21 92.80 141.34 58.09 56.17 70.52 33.65 114.75 286.49 240.53 192.36 468.78 545.65 228.83 302.76 62.93 94.31 105.27 137.21 225.77 168.17 49 ER17a ExonRegion 0 10.73 6.24 3.95 2.50 2.98 0.93 4.72 3.70 1.30 2.99 7.49 8.84 4.95 7.39 9.60 5.86 4.51 1.28 2.47 4.73 3.23 7.01 2.15 50 E17_Ab KnownBoundary 0 14.15 8.81 3.02 3.80 4.33 0.00 12.06 4.11 1.71 2.53 0.00 0.00 0.00 2.47 0.00 8.72 4.77 1.91 4.80 2.56 3.15 4.90 0.00 51 ER17b ExonRegion 0 164.78 130.44 121.24 60.72 104.65 66.22 48.91 61.01 27.43 113.01 333.19 209.21 135.49 355.72 456.53 240.48 312.41 64.14 80.77 79.10 133.47 175.36 121.71 52 E17a_E18b KnownJunction 0 107.65 98.54 106.32 56.94 79.29 58.55 50.61 60.17 27.75 98.56 297.55 239.18 150.15 242.75 380.74 169.27 215.43 46.30 66.92 71.78 125.59 154.06 104.23 53 ER18a ExonRegion 1 31.75 29.15 31.86 19.53 22.30 12.84 14.56 20.74 9.47 30.58 116.62 88.03 31.27 85.54 95.74 59.44 80.32 16.63 19.11 20.57 47.75 45.14 37.20 54 ER18b ExonRegion 0 108.23 82.56 116.88 64.59 72.32 45.25 30.16 63.34 27.69 86.93 253.52 245.92 135.03 209.75 321.88 150.89 221.80 27.97 58.37 71.81 79.87 186.23 69.97 55 E18_Da KnownBoundary 0 69.79 56.37 59.31 44.45 44.99 17.83 21.11 36.51 19.01 36.56 56.86 138.04 91.23 77.87 133.26 38.20 90.23 10.65 24.57 62.83 8.77 56.76 14.17 56 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 57 ER18c ExonRegion 1 48.77 44.31 25.17 15.67 27.23 9.58 18.77 8.68 11.61 19.15 57.97 97.75 55.81 38.91 86.30 15.79 42.36 10.39 15.54 28.46 5.04 45.86 6.20 58 E18_Db NovelBoundary 0 68.23 28.48 8.28 6.63 22.33 25.10 17.58 7.85 0.00 12.81 12.06 23.86 12.66 12.42 14.34 0.00 12.81 0.00 0.00 13.61 0.00 31.47 0.00 59 ER18d ExonRegion 0 9.17 8.13 5.31 0.91 2.68 2.45 1.32 1.73 1.24 0.76 1.93 25.98 3.13 1.08 14.51 0.00 0.00 0.00 0.00 0.00 0.00 6.25 0.00 60 I18 Intron 0 5.54 11.99 6.25 7.09 7.72 9.11 9.46 5.23 5.08 11.40 4.01 18.12 17.46 4.79 5.06 7.55 12.31 8.13 8.93 20.42 4.64 3.59 5.33 61 I18_SR1 SilentIntronRegion 0 4.09 9.76 8.03 6.50 4.55 6.35 8.25 7.45 5.32 15.99 4.33 10.79 6.07 4.69 6.39 9.69 14.66 12.12 11.42 24.22 6.18 3.39 7.38 62 I18_AR2 ActiveIntronRegion 0 5.78 28.87 2.64 7.32 5.55 8.25 9.16 4.97 7.51 15.38 3.66 15.98 20.35 4.01 3.46 6.32 10.04 16.47 13.65 23.20 8.61 0.63 10.13 63 I18_SR2 SilentIntronRegion 0 9.38 17.51 11.02 13.46 15.65 15.49 12.69 8.33 7.53 18.60 4.07 18.74 25.71 5.89 5.24 8.73 13.12 11.04 11.33 22.91 5.70 4.50 5.84 64 I18_AR3 ActiveIntronRegion 0 9.36 18.62 13.68 9.90 17.38 28.48 17.31 5.69 6.54 15.65 3.53 23.65 20.70 6.38 8.69 9.67 14.75 9.84 9.11 20.74 2.62 4.60 6.23 65 I18_SR3 SilentIntronRegion 0 3.84 9.36 3.51 4.45 5.09 6.76 7.70 3.81 4.02 7.03 3.76 18.67 16.77 4.30 3.96 6.96 11.68 5.99 7.85 18.41 4.15 3.40 4.90 66 I18_AR4 ActiveIntronRegion 0 5.14 4.94 5.00 5.56 4.00 3.43 9.54 2.89 3.20 6.81 4.81 26.53 17.27 5.03 7.31 4.58 12.69 2.34 3.97 19.32 2.20 4.41 1.83 67 ER19a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 5.30 0.00 0.00 0.90 1.86 16.49 0.54 5.15 0.00 0.00 1.40 1.81 3.06 0.12 0.00 3.77 0.00 68 E19a_E20a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 I19 Intron 0 6.52 14.21 6.29 11.01 6.24 4.28 11.42 6.15 4.52 8.71 2.66 12.57 17.27 2.96 5.48 5.79 8.84 4.80 7.07 20.12 2.54 3.10 2.89 70 I19_AR1 ActiveIntronRegion 0 5.14 11.42 9.59 11.39 5.99 4.87 11.82 5.85 4.99 7.81 2.64 18.93 12.60 1.22 6.45 6.09 7.18 4.84 5.62 24.90 3.16 1.87 3.07 71 I19_SR2 SilentIntronRegion 0 5.36 14.16 4.89 12.19 5.85 4.20 11.95 5.78 5.21 9.69 2.77 12.98 18.62 3.85 5.09 6.19 11.54 4.40 9.11 21.43 2.50 3.20 3.11 72 I19_AR2 ActiveIntronRegion 0 15.08 8.64 12.99 13.70 14.05 11.32 11.49 5.14 5.93 7.57 2.71 6.93 21.81 5.28 4.42 7.06 14.52 15.06 17.20 12.55 0.00 3.39 5.87 73 I19_AR4 ActiveIntronRegion 0 22.19 42.16 16.97 20.42 23.20 9.83 20.27 20.22 11.19 17.85 3.43 40.54 39.37 6.75 9.79 10.34 10.03 2.87 5.76 30.43 0.43 11.46 4.44 74 I19_AR5 ActiveIntronRegion 1 22.15 18.45 3.89 7.01 15.27 1.65 9.78 6.24 2.44 9.93 0.00 34.11 61.43 0.59 5.45 4.71 2.25 3.38 3.11 11.00 0.00 9.91 4.58 75 ER20a ExonRegion 0 1.69 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 0.00 0.06 8.66 2.64 1.29 0.00 0.00 5.26 0.00 0.00 6.68 0.00 0.00 0.00