Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AF235103.2 Gene 0 9.87 17.81 8.16 17.51 26.53 43.80 25.21 20.74 26.18 44.24 13.97 51.43 28.39 16.78 8.86 15.72 17.66 22.07 17.23 35.31 12.04 19.43 14.67 2 427606 Transcript 0 8.50 15.88 6.39 10.33 27.37 77.23 35.63 15.41 15.32 31.92 11.62 17.52 9.79 15.91 7.73 18.31 16.59 34.34 15.54 29.57 20.13 14.65 12.74 3 426361 Transcript 0 13.05 15.76 4.81 9.38 14.05 17.07 31.37 12.89 25.07 32.46 15.75 11.86 6.85 8.80 9.79 6.30 15.92 12.20 30.33 39.47 6.61 19.51 7.47 4 355436 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 14.92 39.08 0.06 6.47 73.74 339.21 108.80 5.95 9.99 18.63 6.68 0.00 0.00 11.00 8.56 27.28 22.44 39.55 15.04 29.89 33.45 28.67 27.43 6 E1a_E2a KnownJunction 0 17.34 25.39 0.00 6.19 58.74 165.08 64.48 8.13 9.69 23.21 4.90 0.00 0.00 9.65 0.00 24.61 12.34 46.51 3.86 32.85 20.88 16.29 7.60 7 ER2a ExonRegion 0 2.90 6.65 7.07 13.42 11.73 15.22 11.89 19.80 14.69 48.14 16.16 14.57 14.13 18.76 13.32 23.33 23.84 39.65 21.86 46.64 32.51 17.38 22.79 8 E2_Da NovelBoundary 0 3.78 3.35 3.02 10.59 0.00 5.79 0.00 8.83 6.05 0.00 0.00 0.00 0.00 3.00 0.00 4.02 0.00 2.57 0.00 20.84 6.05 2.94 0.00 9 E2a_E3a KnownJunction 0 3.78 7.70 8.84 10.52 0.00 13.46 14.49 19.80 21.67 57.65 6.79 13.20 6.82 35.61 20.27 38.62 17.95 51.11 17.22 38.35 13.65 9.31 8.71 10 E2a_E4a NovelJunction 0 0.00 2.63 0.00 2.03 0.00 0.00 0.00 5.91 3.01 1.67 7.79 0.00 0.00 2.47 4.45 4.36 4.77 13.22 0.00 6.01 2.97 5.57 4.01 11 E3_Aa NovelBoundary 0 50.16 109.45 8.13 9.89 8.57 13.23 47.83 2.05 6.42 5.05 4.84 6.45 0.00 0.00 0.00 0.00 7.48 9.37 0.00 0.00 2.66 0.00 0.00 12 ER3a ExonRegion 0 5.97 8.13 11.06 12.33 18.86 64.91 20.02 24.35 15.58 38.77 17.66 26.88 13.56 15.47 9.88 19.63 9.48 30.26 13.85 24.54 13.18 8.99 5.09 13 E3_Da NovelBoundary 1 57.49 108.40 36.55 80.04 152.63 513.00 259.46 75.66 79.28 94.39 35.32 209.92 235.70 17.48 4.33 56.48 22.63 69.89 47.34 54.90 8.03 51.86 83.49 14 E3a_E4a KnownJunction 0 0.00 6.58 3.05 10.52 12.82 21.92 27.69 15.36 11.72 11.90 14.11 13.65 0.00 7.24 0.00 0.00 13.18 17.41 4.80 2.68 9.20 2.69 3.93 15 I3 Intron 0 3.05 14.94 6.83 11.19 9.74 14.62 12.16 11.41 11.53 25.23 2.92 9.95 5.56 9.28 4.25 11.79 12.02 25.40 15.36 34.54 9.61 5.26 7.61 16 I3_AR1 ActiveIntronRegion 0 3.06 14.95 6.83 11.20 9.75 14.63 12.17 11.41 11.54 25.24 2.92 9.96 5.57 9.29 4.26 11.80 12.02 25.41 15.37 34.57 9.61 5.27 7.61 17 E4_Aa NovelBoundary 0 3.41 21.18 11.62 19.81 3.14 0.00 27.65 13.76 19.42 55.34 5.26 0.00 6.49 4.53 4.45 11.96 8.60 60.94 26.17 53.18 14.02 0.00 12.38 18 ER4a ExonRegion 0 4.88 17.93 9.03 12.29 26.22 30.98 21.49 14.63 20.53 38.07 17.28 32.40 25.22 30.50 6.77 20.18 26.81 37.86 24.09 38.84 29.46 9.36 18.42 19 E4_Da NovelBoundary 0 0.00 20.06 4.88 16.35 0.00 7.38 4.06 13.31 5.38 10.93 0.00 0.00 6.82 0.00 10.75 7.01 0.00 6.14 8.66 27.74 11.49 0.00 13.06 20 E4a_E5b KnownJunction 0 13.48 25.85 8.22 13.55 34.04 16.01 29.19 20.04 28.07 35.19 16.27 23.86 8.28 7.06 4.45 3.42 20.66 33.70 26.64 36.50 27.80 19.29 12.46 21 I4_AR1 ActiveIntronRegion 0 7.35 8.19 6.49 16.60 5.90 4.94 5.63 7.59 5.90 11.09 0.42 5.69 4.69 4.47 1.02 4.31 6.86 6.30 10.90 15.92 4.34 1.04 3.54 22 I4_SR2 SilentIntronRegion 0 2.57 20.51 5.66 9.09 2.10 3.60 6.42 7.51 5.74 6.83 1.19 1.40 3.17 0.69 0.00 4.34 5.99 4.45 5.64 15.14 0.86 1.63 4.99 23 E5_Ac NovelBoundary 0 10.59 56.31 24.10 15.02 31.32 39.13 29.41 22.63 26.65 43.06 16.32 56.27 13.96 37.02 8.90 16.75 20.66 37.27 19.29 47.36 19.03 22.47 11.44 24 ER5a ExonRegion 0 5.29 11.18 5.51 6.13 16.05 7.34 13.24 8.64 11.73 18.35 6.77 10.82 7.04 8.12 2.90 1.49 11.55 14.78 9.56 18.09 13.22 9.38 7.34 25 ER5b ExonRegion 0 7.81 30.08 16.48 11.98 23.34 27.00 27.48 17.58 23.51 35.67 14.06 29.71 12.78 24.25 8.10 10.76 21.97 32.75 22.30 40.43 22.11 18.32 12.76 26 ER5c ExonRegion 0 16.14 32.86 12.44 27.40 44.69 46.95 34.36 30.81 42.55 72.22 21.81 80.22 42.69 26.75 15.31 24.81 29.41 29.15 29.46 60.87 14.19 27.77 22.50 27 E5_Da KnownBoundary 0 10.89 27.89 11.86 35.33 20.29 54.17 46.28 50.89 67.53 92.27 27.48 107.74 48.54 19.54 24.35 16.92 26.18 18.03 53.93 40.01 8.22 54.80 14.43 28 E5a_E5e KnownJunction 0 20.82 20.33 4.11 12.62 12.05 26.80 49.51 17.13 38.40 46.58 24.74 12.90 6.66 9.48 16.69 11.11 20.29 9.62 51.11 60.85 0.00 29.64 7.60 29 ER5d ExonRegion 0 12.21 16.75 12.24 33.87 31.23 59.49 35.09 39.63 49.83 69.31 20.91 115.16 60.86 21.05 8.99 16.93 20.29 27.19 16.54 40.36 10.86 38.65 19.04 30 E5_Db KnownBoundary 0 9.19 2.43 18.45 6.66 17.15 23.57 38.73 19.43 17.56 32.21 9.42 36.76 12.66 9.42 0.00 11.28 9.54 10.99 12.80 24.99 3.15 27.98 7.77 31 E5b_E5d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER5e ExonRegion 0 13.23 5.62 10.19 7.69 10.20 28.28 22.63 10.61 5.92 15.75 4.71 33.15 20.08 7.87 6.30 7.76 2.58 12.96 12.49 15.82 1.03 19.89 8.26 33 E5_Ad KnownBoundary 0 26.67 30.72 34.50 25.97 38.20 81.37 48.71 21.24 21.70 35.89 9.27 31.51 40.42 2.47 6.30 7.18 3.74 21.56 8.09 39.25 12.11 18.74 7.94 34 ER5f ExonRegion 0 6.37 3.05 0.91 0.45 3.52 14.63 8.14 0.55 0.00 0.98 0.00 2.06 2.85 0.36 0.02 0.08 0.00 1.31 1.40 0.47 0.41 0.32 0.60 35 E5_Ae KnownBoundary 0 43.93 54.20 94.79 85.34 59.85 132.42 89.56 36.23 31.31 65.95 24.59 21.91 0.00 0.00 10.63 48.45 40.67 28.19 25.88 104.12 19.77 14.14 7.77 36 ER5g ExonRegion 0 1.06 0.39 0.18 0.00 0.00 0.99 0.00 0.00 0.56 0.34 0.00 0.08 0.00 0.40 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 37 E5_Dc KnownBoundary 0 31.19 50.52 61.83 61.46 44.23 90.80 70.17 78.16 70.37 100.11 33.38 12.15 6.49 20.01 10.88 106.55 67.23 112.55 38.87 70.76 53.31 20.51 45.24 38 ER5h ExonRegion 0 0.00 0.38 0.00 0.00 0.50 0.00 0.00 0.00 0.35 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.52 0.00 0.00 0.82 0.00 0.00