Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPR172A Gene 0 28.69 26.49 130.57 57.77 21.40 105.35 27.21 70.49 59.92 118.83 129.15 28.66 41.06 153.13 197.95 101.29 88.00 124.15 93.72 67.14 142.45 145.69 123.34 2 329994 Transcript 0 2.02 1.92 7.25 2.25 2.75 6.79 2.11 2.91 5.13 7.10 12.03 0.89 1.90 9.11 12.11 7.51 7.60 7.32 5.86 5.16 11.17 8.34 8.02 3 402965 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG23 Intergenic 0 0.00 0.00 0.00 0.00 0.00 24.40 2.94 1.43 0.00 0.95 23.57 0.00 0.00 32.94 29.90 41.19 18.30 1.02 10.59 5.90 2.44 0.00 6.51 5 IG23_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 24.84 3.00 1.46 0.00 0.97 24.03 0.00 0.00 33.62 30.53 41.97 18.67 1.05 10.83 6.03 2.50 0.00 6.66 6 ER1a ExonRegion 0 0.50 0.48 0.00 0.00 0.00 1.51 2.02 0.00 0.00 0.00 1.82 0.00 0.00 2.10 3.41 0.70 0.00 0.00 2.25 0.75 0.00 0.00 1.04 7 ER1b ExonRegion 0 16.30 5.76 10.73 3.63 14.87 34.22 11.78 1.64 2.36 8.83 32.38 0.00 2.01 25.61 50.75 12.00 22.25 5.09 24.95 7.46 43.56 26.22 34.63 8 E1_Da KnownBoundary 0 33.34 12.04 46.36 23.11 30.65 73.65 30.83 14.99 12.12 26.43 44.54 0.00 6.66 70.87 41.91 43.07 38.15 65.83 30.21 16.94 78.77 75.01 67.18 9 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 3.71 4.70 15.28 4.52 2.91 12.54 3.87 5.31 3.55 10.33 23.86 0.10 1.99 16.67 30.17 13.32 17.38 8.47 7.82 11.08 28.07 16.40 15.81 11 E1_Db NovelBoundary 1 0.00 0.00 76.73 23.94 8.49 11.41 0.00 29.37 33.65 46.47 73.65 6.30 0.00 64.22 39.56 36.57 52.83 39.42 4.24 44.68 103.60 23.57 50.88 12 E1b_E2a KnownJunction 0 0.00 0.00 3.37 0.00 0.00 0.00 0.00 0.00 3.39 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 7.54 0.00 0.00 0.00 0.00 0.00 13 I1 Intron 1 3.78 4.67 42.38 12.95 2.73 31.10 6.92 17.08 17.13 37.05 37.95 5.65 3.94 64.57 69.96 31.83 26.51 50.58 22.74 21.70 57.02 47.55 46.80 14 I1_AR1 ActiveIntronRegion 1 3.80 4.69 42.59 13.01 2.74 31.25 6.96 17.16 17.22 37.23 38.13 5.68 3.96 64.89 70.29 31.99 26.65 50.83 22.85 21.81 57.30 47.79 47.04 15 ER2a ExonRegion 0 3.39 3.66 16.67 4.36 7.49 6.60 2.91 6.22 16.55 21.10 28.61 4.33 7.50 19.49 22.63 19.62 19.81 17.37 14.65 12.77 23.36 23.75 22.91 16 ER2b ExonRegion 0 31.09 25.74 141.85 55.28 16.37 78.77 22.48 71.93 71.78 138.98 139.83 33.95 27.04 180.70 198.42 106.45 97.33 111.30 76.86 72.53 172.28 158.07 126.71 17 E2a_E3a KnownJunction 0 48.97 84.98 202.83 132.38 48.47 153.72 47.56 107.12 106.28 234.56 217.00 56.12 48.54 257.70 292.11 184.57 195.23 271.69 203.30 98.56 190.83 371.56 216.14 18 ER3a ExonRegion 0 36.54 39.53 185.16 82.51 30.60 147.65 39.07 92.44 80.91 158.95 169.75 41.40 62.95 197.28 255.63 134.59 118.93 173.40 128.97 93.18 182.74 200.13 162.23 19 E3a_E4a KnownJunction 0 42.90 18.02 160.31 61.20 7.72 165.13 35.77 79.11 69.91 119.32 138.93 7.65 55.52 150.27 175.04 77.84 75.92 194.17 105.23 85.65 135.17 124.55 153.48 20 ER4a ExonRegion 0 21.71 23.53 104.78 38.79 13.03 98.89 29.37 72.48 61.72 111.50 119.00 18.05 41.61 167.09 222.72 117.11 67.80 149.92 111.08 59.44 133.31 131.70 134.28 21 E4a_E5a KnownJunction 0 38.15 29.40 121.20 44.75 15.28 105.28 23.45 89.95 52.78 118.86 157.25 37.06 20.29 166.76 193.96 111.17 88.64 102.39 53.37 62.32 185.58 120.87 112.94 22 ER5a ExonRegion 0 25.60 14.67 91.03 45.71 16.59 86.15 17.77 62.69 43.55 92.35 104.97 19.73 27.32 122.76 168.40 78.56 67.68 92.37 73.45 48.04 112.87 107.56 99.38 23 ER5b ExonRegion 0 2.51 0.76 0.92 2.39 3.34 13.30 1.74 3.02 2.16 4.09 3.38 0.00 0.00 7.31 4.35 3.90 0.83 3.23 4.58 1.20 4.41 1.56 0.37 24 IG24 Intergenic 0 1.24 1.77 14.75 7.95 5.21 17.70 2.58 10.31 7.43 16.08 3.22 0.43 0.65 5.14 2.93 4.05 2.22 10.64 11.96 5.31 1.83 0.96 2.03 25 IG24_SR1 SilentIntergenicRegion 0 1.24 1.77 14.76 7.95 5.21 17.71 2.58 10.32 7.44 16.08 3.22 0.43 0.65 5.14 2.93 4.05 2.22 10.64 11.97 5.32 1.83 0.96 2.03