Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPT Gene 0 3.99 1.29 8.04 3.26 2.25 5.14 1.52 6.49 5.01 7.66 3.15 2.29 1.63 8.90 9.01 3.03 4.45 9.49 7.87 5.63 8.41 2.97 4.49 2 354769 Transcript 0 0.50 2.02 8.64 3.34 0.22 1.88 2.77 9.51 4.58 7.26 3.02 1.93 2.48 10.84 11.46 4.37 8.18 11.58 9.98 4.09 8.80 2.94 8.71 3 394955 Transcript 0 3.92 0.86 6.15 2.76 1.43 3.53 0.58 4.10 3.23 5.75 1.23 1.10 0.83 3.63 5.12 1.94 2.06 5.10 3.19 2.50 4.17 1.54 1.66 4 IG32 Intergenic 0 1.84 1.55 8.66 4.17 1.90 5.60 1.92 8.55 8.97 10.27 4.43 3.64 4.64 11.63 12.34 6.34 7.04 22.81 12.17 10.37 10.04 2.91 5.03 5 IG32_SR1 SilentIntergenicRegion 0 1.30 1.66 11.82 5.63 3.83 3.45 2.52 9.70 11.52 13.68 6.97 2.30 4.28 12.17 17.83 8.42 13.85 36.68 22.18 14.59 12.26 3.79 4.63 6 IG32_AR1 ActiveIntergenicRegion 0 0.00 0.00 9.80 5.45 5.35 2.14 7.94 10.37 14.82 12.23 3.22 4.33 9.38 10.56 10.64 8.92 15.40 43.73 30.26 14.18 2.20 3.82 14.68 7 IG32_SR2 SilentIntergenicRegion 0 3.25 1.53 12.73 5.98 2.93 7.35 2.33 11.91 9.36 14.54 4.66 6.30 8.55 15.12 16.21 7.94 7.82 29.13 16.69 12.26 15.97 3.68 7.99 8 IG32_AR2 ActiveIntergenicRegion 0 1.95 0.94 5.89 3.02 0.00 1.20 2.08 11.01 10.00 6.48 2.77 4.61 3.46 10.26 8.59 3.77 5.80 19.33 9.16 6.12 6.03 1.58 4.99 9 IG32_SR3 SilentIntergenicRegion 0 1.54 2.27 7.50 2.95 0.93 5.49 1.41 8.06 8.98 7.09 4.21 3.40 3.16 9.11 11.24 6.28 5.54 17.46 6.70 11.32 6.69 3.26 4.32 10 IG32_AR3 ActiveIntergenicRegion 0 0.31 0.61 2.59 2.59 1.19 6.42 1.48 1.68 5.95 7.55 3.35 0.00 1.15 10.21 5.31 3.34 3.78 12.28 7.51 4.32 5.90 0.93 1.31 11 ER1a ExonRegion 0 4.15 1.35 4.35 2.15 1.77 4.62 1.75 3.57 4.63 3.67 4.35 1.42 1.53 12.27 4.45 1.97 3.94 10.31 10.13 9.86 5.54 2.48 5.06 12 E1_Da NovelBoundary 0 3.78 0.00 6.56 5.09 0.00 12.27 2.12 8.58 10.59 4.19 2.21 0.00 0.00 4.36 8.90 4.36 0.00 12.02 21.84 12.21 11.37 2.63 4.01 13 E1a_E2a KnownJunction 0 6.89 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I1 Intron 0 0.00 0.00 3.40 0.76 1.99 1.37 1.48 1.92 0.69 5.73 2.88 0.00 0.00 9.14 3.94 4.43 7.37 16.75 8.30 9.50 4.10 2.33 3.28 15 I1_SR1 SilentIntronRegion 0 0.00 0.00 3.53 0.78 2.07 1.42 1.53 1.99 0.71 5.92 2.99 0.00 0.00 9.41 4.09 4.59 7.65 17.30 8.61 9.86 4.26 2.41 3.40 16 E2_Aa NovelBoundary 0 14.00 3.29 1.42 3.26 4.33 2.90 4.42 4.64 15.45 2.18 2.68 0.00 0.00 12.01 6.30 0.00 4.68 15.75 15.81 6.33 11.80 3.00 7.26 17 ER2a ExonRegion 0 2.85 1.13 1.70 2.30 0.56 5.73 0.04 1.42 1.29 5.63 4.38 3.90 0.00 4.20 4.64 3.37 1.87 7.41 8.92 6.15 5.02 1.18 0.00 18 E2_Da NovelBoundary 0 9.78 3.03 8.16 0.00 0.00 2.90 4.20 5.50 3.88 11.82 2.63 0.00 0.00 4.65 0.00 4.19 0.00 18.03 7.72 13.42 0.00 2.76 7.26 19 E2a_E3a KnownJunction 0 2.82 0.00 3.22 0.00 4.24 5.00 0.00 3.90 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3_Aa NovelBoundary 0 6.45 2.96 5.50 4.13 4.16 4.54 0.00 8.50 3.21 2.85 2.16 6.30 0.00 9.54 0.00 4.36 4.77 6.55 0.00 5.69 8.15 0.00 0.00 21 ER3a ExonRegion 0 6.08 0.02 6.00 2.24 1.79 9.15 1.20 5.25 2.72 5.49 2.73 0.12 0.39 6.73 8.62 2.18 1.94 13.29 10.99 5.29 7.48 3.48 4.98 22 E3_Da KnownBoundary 0 0.00 0.00 8.31 4.76 3.48 4.66 0.00 12.94 1.19 8.84 4.32 0.00 5.84 9.54 4.45 4.36 4.11 7.79 12.52 2.62 5.75 5.57 7.60 23 E3a_E3b KnownJunction 0 10.59 0.00 0.00 1.70 0.00 4.43 0.00 3.57 0.00 3.87 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.40 4.14 2.62 0.00 0.00 0.00 24 ER3b ExonRegion 0 0.50 2.02 8.64 3.34 0.22 1.88 2.77 9.51 4.58 7.26 3.02 1.93 2.48 10.84 11.46 4.37 8.18 11.58 9.98 4.09 8.80 2.94 8.71 25 E3_Ab KnownBoundary 0 6.96 3.03 31.46 5.13 0.00 0.00 10.42 22.14 14.09 16.17 2.68 6.15 7.63 4.89 13.97 3.59 0.00 23.46 13.27 8.69 24.40 5.45 14.94 26 ER3c ExonRegion 0 5.22 2.91 21.53 8.20 1.78 7.52 5.58 25.90 11.16 20.28 6.38 4.69 3.05 16.05 23.74 2.48 5.01 20.02 18.48 9.11 18.88 7.74 19.04 27 E3_Db KnownBoundary 0 6.67 0.00 24.81 13.05 4.07 9.54 0.00 36.02 12.15 23.93 2.68 13.50 13.96 18.95 28.68 11.28 8.51 26.61 29.37 15.02 8.65 8.57 4.18 28 ER3d ExonRegion 0 7.16 1.42 14.67 8.36 2.27 4.62 0.15 18.26 10.37 12.21 5.98 3.50 5.01 12.06 15.74 10.42 5.15 12.23 14.66 16.44 8.12 4.02 5.79 29 E3_Dc NovelBoundary 0 6.59 0.00 7.95 7.36 4.33 5.68 2.25 12.36 11.11 6.90 0.00 12.30 0.00 12.18 14.59 8.46 4.30 12.97 18.26 5.05 11.24 3.12 0.00 30 E3c_E4a KnownJunction 0 3.78 0.00 3.52 5.56 0.00 0.00 0.00 3.66 5.30 7.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.48 0.00 0.00 0.00 0.00 0.00 31 I3 Intron 0 0.00 0.91 3.27 0.91 1.20 1.64 0.00 5.76 1.65 0.76 1.73 4.79 0.00 5.04 13.82 0.00 2.95 2.46 2.85 3.81 7.89 3.73 7.88 32 I3_AR1 ActiveIntronRegion 0 0.00 1.02 3.65 1.02 1.13 1.83 0.00 5.93 1.71 0.85 1.93 5.35 0.00 5.25 14.85 0.00 3.01 2.61 3.19 4.26 8.43 4.17 8.61 33 E4_Aa NovelBoundary 0 3.41 0.00 11.12 6.36 0.00 0.00 3.97 13.31 4.98 3.76 2.58 0.00 0.00 9.83 14.71 7.69 0.00 14.67 0.00 26.59 7.72 8.57 7.60 34 ER4a ExonRegion 0 5.21 1.03 9.60 3.45 1.68 4.97 1.11 11.66 8.37 12.99 1.22 1.49 1.67 4.64 9.30 4.97 5.48 13.14 9.96 4.45 10.23 1.31 4.30 35 E4_Da NovelBoundary 0 3.78 0.00 6.89 1.80 0.00 0.00 0.00 6.78 0.00 8.89 0.00 0.00 0.00 7.18 4.45 4.02 8.98 18.07 35.39 6.33 15.75 2.51 0.00 36 E4a_E5a KnownJunction 0 3.78 3.35 8.78 0.00 0.00 0.00 0.00 1.60 1.27 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 0.00 0.00 37 E5_Aa NovelBoundary 0 0.00 0.00 7.04 7.46 0.00 2.27 0.00 1.52 5.24 4.08 4.00 0.00 0.00 9.48 0.00 6.75 3.65 9.82 3.58 2.43 15.81 0.00 3.67 38 ER5a ExonRegion 0 4.79 2.03 10.05 1.33 3.41 0.05 0.12 3.18 2.19 2.75 0.00 0.00 0.00 0.85 2.72 0.00 0.12 1.50 0.00 0.00 4.02 0.00 1.87 39 E5_Da NovelBoundary 0 0.00 0.00 9.28 5.16 3.40 2.16 0.00 11.38 2.31 8.00 2.26 0.00 0.00 4.18 9.15 0.00 3.83 4.39 0.00 2.56 9.39 0.00 0.00 40 E5a_E6a KnownJunction 0 0.00 0.00 1.12 0.00 0.00 0.00 1.68 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E6_Aa NovelBoundary 0 7.56 0.00 3.55 9.02 3.90 11.02 2.25 4.31 10.82 6.63 2.16 6.15 6.17 9.42 0.00 16.24 3.46 13.97 4.80 5.18 8.96 3.12 0.00 42 ER6a ExonRegion 0 3.18 0.01 11.76 3.62 1.91 4.78 1.41 4.73 3.98 6.93 2.16 1.33 0.00 7.85 6.35 1.11 2.29 9.20 5.88 4.75 4.92 0.78 2.19 43 E6_Da NovelBoundary 0 0.00 0.00 16.38 6.49 11.21 8.57 0.00 8.79 6.83 3.52 0.00 11.70 0.00 2.12 4.45 0.00 4.30 8.21 8.28 0.00 3.15 0.00 8.02 44 E6a_E7a KnownJunction 0 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E7_Aa NovelBoundary 0 0.00 3.35 7.84 1.60 0.00 0.00 0.00 6.70 0.00 1.67 7.11 5.55 0.00 14.01 8.90 4.27 4.68 11.28 4.42 3.07 0.00 2.76 7.85 46 ER7a ExonRegion 0 2.42 1.19 11.43 4.40 3.96 7.13 1.54 4.57 6.15 6.62 2.25 4.16 1.13 7.01 9.47 2.31 2.90 6.80 2.82 3.72 10.25 2.35 5.13 47 E7_Da NovelBoundary 0 0.00 0.00 21.05 6.33 0.00 2.38 1.68 9.36 15.68 8.95 4.69 12.60 0.00 14.19 13.47 4.36 0.00 18.90 9.04 8.88 17.98 0.00 0.00 48 E7a_E8a KnownJunction 0 7.41 0.00 4.44 1.70 0.00 5.62 0.00 0.00 1.74 2.87 0.00 0.00 0.00 0.00 4.45 3.85 0.00 1.74 0.00 0.00 0.00 0.00 0.00 49 I7 Intron 0 1.15 0.00 1.98 3.31 1.45 0.99 1.44 0.00 3.00 2.78 7.34 1.93 2.10 8.29 11.67 1.61 5.37 3.50 8.64 8.08 11.96 4.52 4.78 50 I7_SR1 SilentIntronRegion 0 1.17 0.00 2.02 3.38 1.48 1.02 1.47 0.00 3.06 2.84 7.50 1.98 2.14 8.46 11.92 1.65 5.49 3.57 8.83 8.26 12.19 4.60 4.88 51 E8_Aa NovelBoundary 0 3.78 0.00 22.15 5.33 0.00 2.90 0.00 4.19 4.60 13.03 0.00 0.00 0.00 19.72 4.45 7.52 12.90 22.59 0.00 0.00 7.91 2.94 4.35 52 ER8a ExonRegion 0 4.03 2.66 8.94 2.51 3.60 7.59 0.43 1.83 4.74 4.73 1.90 0.00 2.53 7.11 5.08 2.27 5.46 9.45 1.04 2.09 8.73 2.58 3.84 53 E8_Da NovelBoundary 0 3.56 0.00 8.49 3.23 0.00 0.00 0.00 0.00 1.27 2.74 0.00 0.00 6.17 11.71 29.17 4.36 0.00 4.02 21.08 0.00 3.15 8.33 0.00 54 E8a_E9a KnownJunction 0 3.70 0.00 3.25 2.06 0.00 0.00 0.00 0.00 1.24 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 0.00 3.00 0.00 55 E9_Aa NovelBoundary 0 0.00 0.00 9.85 9.72 0.00 2.73 4.24 10.39 6.80 12.84 4.37 0.00 0.00 12.18 9.64 0.00 8.88 8.00 9.04 11.44 19.95 8.08 0.00 56 ER9a ExonRegion 0 2.19 0.92 5.19 3.57 3.48 5.99 0.00 3.73 2.43 9.67 0.87 1.61 0.00 4.28 7.83 2.68 4.47 1.70 4.45 0.96 8.85 4.09 0.00 57 E9_Da NovelBoundary 0 3.78 0.00 8.46 6.86 0.00 2.21 0.00 17.00 7.00 13.91 2.53 0.00 13.64 9.59 11.99 3.85 13.37 6.38 4.05 12.27 25.08 0.00 0.00 58 E9a_E10a KnownJunction 0 0.00 0.00 0.00 1.50 0.00 7.44 0.00 2.46 0.00 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E10_Aa NovelBoundary 0 3.78 6.38 14.16 7.42 4.33 0.00 2.03 24.36 9.14 22.48 6.90 0.00 0.00 20.01 29.42 0.00 18.42 15.63 8.38 11.70 22.92 8.27 4.35 60 ER10a ExonRegion 0 4.53 1.19 5.72 2.81 2.60 3.84 2.83 6.33 3.90 9.63 5.27 5.55 3.01 14.33 16.58 3.47 7.07 7.69 8.00 4.97 11.57 6.49 3.43 61 IG33 Intergenic 0 5.57 2.51 16.01 6.00 3.48 5.00 3.74 16.39 11.72 12.54 6.47 7.87 5.02 11.21 20.62 6.28 9.33 16.20 14.17 14.44 20.46 6.63 7.15 62 IG33_SR1 SilentIntergenicRegion 0 4.99 2.78 18.47 7.15 3.61 4.54 4.56 17.63 12.15 13.44 5.42 8.36 4.24 10.47 23.31 5.90 9.26 17.38 17.84 15.98 23.27 6.31 8.71 63 IG33_AR1 ActiveIntergenicRegion 0 6.18 2.25 13.62 4.88 3.36 5.49 2.93 15.24 11.34 11.70 7.56 7.42 5.83 12.00 18.04 6.68 9.45 15.10 10.55 12.96 17.73 6.99 5.63