Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MFSD3 Gene 0 14.65 15.78 82.68 45.23 8.05 22.94 7.31 26.36 24.19 38.35 40.27 7.44 4.70 65.64 87.12 37.87 28.81 48.97 81.92 68.09 45.31 23.55 36.15 2 301327 Transcript 0 20.60 21.74 113.70 83.28 9.14 28.43 8.58 40.81 35.14 55.50 47.40 10.58 5.66 77.60 103.15 54.96 30.56 80.39 110.04 99.41 52.62 39.15 51.19 3 IG33 Intergenic 0 5.57 2.51 16.01 6.00 3.48 5.00 3.74 16.39 11.72 12.54 6.47 7.87 5.02 11.21 20.62 6.28 9.33 16.20 14.17 14.44 20.46 6.63 7.15 4 IG33_SR1 SilentIntergenicRegion 0 4.99 2.78 18.47 7.15 3.61 4.54 4.56 17.63 12.15 13.44 5.42 8.36 4.24 10.47 23.31 5.90 9.26 17.38 17.84 15.98 23.27 6.31 8.71 5 IG33_AR1 ActiveIntergenicRegion 0 6.18 2.25 13.62 4.88 3.36 5.49 2.93 15.24 11.34 11.70 7.56 7.42 5.83 12.00 18.04 6.68 9.45 15.10 10.55 12.96 17.73 6.99 5.63 6 ER1a ExonRegion 0 9.42 13.83 67.74 24.70 6.43 20.26 5.63 16.87 16.34 26.22 34.74 4.58 3.30 55.82 72.21 28.32 27.26 33.90 68.85 50.45 41.77 14.39 28.68 7 E1_Da NovelBoundary 0 6.45 3.29 18.12 12.19 0.00 8.01 0.00 0.00 1.50 23.02 13.48 6.30 0.00 12.77 8.90 16.24 7.76 37.18 9.41 15.79 0.00 2.33 11.95 8 E1a_E2a KnownJunction 0 15.71 24.93 103.28 43.48 0.00 25.89 4.24 29.37 26.50 33.71 28.06 7.65 0.00 42.91 70.34 28.45 33.94 77.43 78.50 89.36 52.26 36.68 31.93 9 E1a_E3a NovelJunction 0 7.26 0.00 2.99 13.58 0.00 0.00 0.00 7.11 4.63 11.44 4.90 5.70 0.00 11.89 13.35 16.49 0.00 1.82 14.21 8.95 8.90 5.27 0.00 10 I1 Intron 0 11.24 3.70 13.03 11.41 4.87 9.74 5.22 5.09 4.19 12.19 9.09 2.09 2.85 13.90 23.21 16.24 7.52 27.33 18.86 7.75 3.01 2.85 7.13 11 I1_SR1 SilentIntronRegion 0 11.37 3.75 13.18 11.54 4.93 9.86 5.29 5.14 4.24 12.34 9.19 2.11 2.88 14.06 23.49 16.44 7.61 27.66 19.08 7.84 3.05 2.88 7.22 12 E2_Aa NovelBoundary 0 18.52 0.00 21.08 27.74 8.66 2.67 12.23 5.01 4.60 18.13 4.42 13.95 6.82 28.49 50.31 42.81 16.46 41.45 12.99 5.37 0.00 5.88 6.91 13 ER2a ExonRegion 0 22.18 17.77 139.66 87.94 13.81 33.29 10.31 47.35 35.05 61.82 53.93 7.75 6.12 91.01 123.52 56.79 32.27 78.39 106.49 112.48 50.09 32.01 43.34 14 E2_Da NovelBoundary 0 16.37 3.35 7.27 13.55 0.00 0.00 0.00 11.21 6.97 7.06 5.11 0.00 0.00 10.18 17.06 12.65 14.21 17.16 4.61 3.26 0.00 3.12 3.76 15 E2a_E3a KnownJunction 0 20.37 36.05 154.28 135.48 19.19 32.82 2.25 41.20 53.41 71.51 74.49 17.41 7.14 81.35 116.57 75.96 26.37 125.02 179.58 133.65 50.66 64.66 66.16 16 E3_Aa NovelBoundary 0 3.78 6.45 7.66 12.52 0.00 22.77 5.39 13.31 4.80 3.81 0.00 0.00 0.00 4.94 5.19 7.43 3.93 10.36 13.65 2.36 5.44 0.00 0.00 17 ER3a ExonRegion 0 25.14 29.32 127.38 112.88 11.20 28.81 15.03 54.23 51.61 66.56 59.84 19.78 10.58 98.45 149.17 70.36 38.05 110.94 137.35 118.50 68.26 46.17 60.92 18 E3_Da NovelBoundary 0 0.00 0.00 33.59 27.20 3.90 5.11 3.84 9.69 15.62 10.42 4.79 6.15 0.00 9.18 4.45 0.00 0.00 12.02 7.81 12.85 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 21.78 26.25 129.74 116.87 12.39 44.58 21.68 70.57 37.33 69.92 60.44 6.15 0.00 94.30 123.86 85.79 40.30 105.37 170.26 130.58 59.99 63.74 85.70 20 E4_Aa NovelBoundary 0 3.48 2.70 31.05 39.89 0.00 5.05 6.67 20.50 8.19 12.41 2.26 0.00 0.00 6.95 14.09 0.00 3.83 12.23 24.75 8.88 0.00 5.69 3.33 21 ER4a ExonRegion 0 29.44 19.52 125.99 96.44 11.94 29.01 9.11 46.68 48.54 76.33 62.96 6.30 2.22 98.26 107.27 76.38 37.99 97.90 125.94 125.96 66.85 50.14 68.34 22 E4_Da NovelBoundary 0 14.08 2.50 26.31 13.38 4.33 5.34 4.20 23.45 9.95 16.04 12.53 5.25 0.00 28.31 34.74 31.44 13.00 27.28 12.89 17.13 5.68 8.94 12.12 23 E4a_E5a KnownJunction 0 22.60 15.00 115.79 92.26 0.00 20.39 1.85 34.38 25.00 54.18 20.58 12.30 13.80 81.64 85.05 45.20 15.99 61.93 56.94 78.81 51.15 13.41 42.94 24 I4 Intron 0 17.37 3.58 4.28 4.76 1.57 8.60 3.88 7.55 1.08 7.01 9.06 3.88 4.53 16.35 36.52 20.91 5.81 8.62 9.34 13.72 7.75 3.66 1.72 25 I4_SR1 SilentIntronRegion 0 18.18 3.75 4.46 4.96 1.64 9.01 4.07 7.91 1.13 7.34 9.50 4.02 4.75 17.06 38.10 21.91 6.08 8.95 9.75 14.33 8.12 3.84 1.80 26 E5_Aa NovelBoundary 0 11.34 6.45 9.99 26.37 8.06 7.84 1.72 9.78 9.26 18.59 16.32 36.91 6.66 33.73 10.01 35.55 13.84 15.75 20.99 8.50 2.29 17.57 7.51 27 ER5a ExonRegion 0 18.76 12.98 59.41 39.47 7.29 20.86 7.11 26.64 22.44 39.23 31.58 13.28 7.79 54.70 80.32 27.38 22.85 32.60 66.48 54.87 32.56 31.18 32.67 28 IG34 Intergenic 0 0.00 0.00 0.00 1.13 2.97 2.03 0.00 4.28 2.04 8.53 7.50 2.40 4.28 6.83 13.62 0.00 9.15 0.00 5.30 4.72 2.44 0.00 8.14 29 IG34_SR1 SilentIntergenicRegion 0 0.00 0.00 0.00 1.36 1.98 2.78 0.00 5.19 2.31 9.75 10.13 3.61 6.77 10.29 17.03 0.00 11.92 0.00 5.07 6.30 3.59 0.00 9.30