Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	GLI4	Gene	0	18.26	16.25	38.27	31.18	13.83	24.10	12.39	29.76	30.54	49.30	20.85	13.71	12.29	40.13	47.60	33.31	30.56	60.85	36.03	29.80	56.83	23.60	33.10
2	330701	Transcript	0	10.07	9.45	20.60	14.37	11.15	18.58	10.56	20.31	21.61	31.35	12.85	8.45	7.70	24.00	32.35	27.85	29.23	51.20	35.73	26.11	47.38	23.66	27.31
3	413511	Transcript	0	0.00	0.00	0.71	0.00	1.66	0.00	0.00	1.15	0.55	0.51	0.00	3.15	0.00	1.24	4.45	1.79	0.00	1.29	0.00	0.00	1.20	0.00	4.14
4	340042	Transcript	0	40.77	10.57	18.97	17.16	8.84	26.75	15.94	19.35	14.26	20.50	23.87	7.92	6.37	37.99	42.72	13.05	17.68	21.57	36.41	12.26	25.19	12.12	8.89
5	344692	Transcript	0	10.90	1.88	15.01	10.05	5.66	9.21	5.63	7.49	8.00	15.00	19.31	8.41	8.79	27.49	30.67	22.59	13.37	13.63	8.42	4.50	25.13	11.75	13.45
6	ER1a	ExonRegion	0	5.29	0.52	4.11	1.04	2.01	11.07	4.80	2.78	7.56	8.60	6.87	2.55	0.00	7.47	12.43	18.58	17.94	42.70	29.93	13.80	27.25	8.45	23.80
7	E1_Da	NovelBoundary	0	0.00	0.00	4.91	1.37	0.00	9.82	0.00	1.60	11.23	18.80	7.63	0.00	0.00	4.94	18.30	11.79	25.99	20.48	20.80	30.68	19.21	3.12	7.00
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.25	6.82	3.07	5.48	7.00	0.00	0.00	2.47	8.90	11.54	13.37	2.24	8.28	6.07	36.88	8.51	0.00
9	I1	Intron	0	4.74	2.23	8.28	4.40	3.21	4.06	5.90	6.04	9.74	13.27	7.76	6.64	4.47	18.05	19.16	13.56	11.18	26.21	19.10	13.86	13.38	10.37	15.46
10	I1_AR1	ActiveIntronRegion	0	5.34	3.25	9.10	7.31	6.00	7.10	5.24	9.92	14.99	27.51	9.79	6.75	4.57	23.21	23.18	20.77	15.64	35.16	25.60	18.33	22.77	13.08	19.42
11	I1_SR1	SilentIntronRegion	0	4.57	1.47	5.29	0.38	1.43	2.90	5.87	2.20	3.78	2.93	5.83	4.20	5.44	9.70	9.17	5.17	4.54	17.41	7.43	7.52	6.23	9.12	10.17
12	I1_AR2	ActiveIntronRegion	0	3.84	2.49	11.97	1.27	0.46	3.78	5.54	8.04	5.68	2.83	9.21	14.93	11.76	20.32	18.75	5.63	7.00	24.55	16.16	15.86	14.16	13.76	12.31
13	I1_SR2	SilentIntronRegion	0	6.09	2.08	9.81	4.23	2.81	3.04	7.71	4.58	9.44	9.31	8.55	6.94	4.56	19.17	20.60	13.17	13.66	26.73	21.95	16.55	9.70	10.10	19.16
14	I1_AR3	ActiveIntronRegion	0	4.27	1.87	6.42	3.98	2.28	2.35	6.89	4.73	9.36	8.52	6.01	4.86	1.42	15.80	21.48	14.64	7.87	23.95	14.12	6.95	10.31	8.90	11.33
15	ER2a	ExonRegion	0	6.25	7.95	18.97	14.44	10.70	14.08	13.34	25.63	20.55	39.12	15.10	15.45	9.44	28.18	35.77	36.26	35.03	72.41	49.86	39.48	50.30	32.81	42.70
16	E2_Ab	KnownBoundary	1	20.00	6.18	32.38	22.97	19.19	51.05	22.39	47.44	25.87	43.97	13.53	6.30	14.45	49.91	4.45	26.06	65.92	85.77	59.86	33.36	65.92	48.01	60.44
17	ER2b	ExonRegion	0	13.17	16.28	28.26	29.03	17.61	33.73	17.93	32.11	39.28	57.07	21.95	21.09	15.12	52.22	43.46	42.39	47.72	90.35	55.28	48.21	71.98	37.34	49.05
18	E2_Da	KnownBoundary	0	10.89	19.27	13.01	18.01	29.20	23.79	13.60	22.02	25.55	58.29	21.48	18.16	19.64	42.62	52.04	35.80	40.86	82.53	55.34	20.96	65.18	8.57	30.13
19	E2a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER2c	ExonRegion	0	12.74	13.16	34.91	24.84	13.80	22.71	11.57	31.82	44.03	52.63	21.63	11.61	12.03	52.94	54.72	41.35	50.58	99.33	63.54	37.82	83.64	36.19	47.51
21	E2_Ac	KnownBoundary	0	11.26	6.12	39.18	28.00	20.46	34.47	15.28	30.11	50.98	85.23	29.53	6.30	13.47	91.94	70.59	24.18	47.41	117.02	75.96	44.74	70.98	30.68	35.43
22	ER2d	ExonRegion	0	12.71	12.89	31.23	20.38	12.32	28.81	13.33	32.33	34.32	52.57	23.15	8.84	20.92	53.78	55.35	42.07	30.18	80.10	48.93	33.37	72.45	28.94	49.21
23	E2_Db	NovelBoundary	0	0.00	0.00	13.22	9.96	3.99	2.90	1.77	5.38	8.59	14.85	12.27	5.70	6.66	44.09	18.42	22.05	9.44	7.67	18.45	29.98	28.85	14.21	22.71
24	E2b_E3a	KnownJunction	0	21.11	12.37	22.59	9.29	25.13	39.30	18.28	24.40	23.29	27.35	15.27	7.65	12.50	23.90	45.86	35.63	34.69	29.43	28.14	27.87	38.12	35.21	20.83
25	E2b_E5a	NovelJunction	0	0.00	0.00	0.00	8.99	0.00	0.00	0.00	0.00	6.34	6.45	0.00	0.00	0.00	12.24	8.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E2b_E6a	KnownJunction	0	0.00	0.00	1.42	0.00	3.31	0.00	0.00	2.30	1.10	1.02	0.00	6.30	0.00	2.47	8.90	3.59	0.00	2.57	0.00	0.00	2.41	0.00	8.28
27	I2	Intron	0	5.58	7.92	9.01	11.46	5.29	5.47	5.12	5.19	4.51	14.09	4.78	4.14	3.32	9.35	12.49	9.31	7.16	18.17	13.21	14.17	12.10	6.32	12.96
28	I2_SR1	SilentIntronRegion	0	4.57	2.19	8.00	8.76	2.98	3.97	4.77	5.02	3.04	13.19	7.81	5.37	3.90	14.41	17.32	13.25	9.76	20.48	10.62	12.26	13.83	8.71	15.30
29	I2_AR1	ActiveIntronRegion	0	3.29	1.48	7.21	7.15	1.66	5.65	3.59	3.77	1.72	9.76	5.03	2.27	2.49	12.33	17.74	11.63	7.96	16.94	7.63	11.48	10.66	5.81	11.39
30	I2_SR2	SilentIntronRegion	0	6.70	12.71	9.28	14.45	8.11	6.14	5.56	5.48	6.49	15.53	2.58	3.96	3.17	4.63	7.56	6.10	5.00	17.16	17.27	17.08	10.85	4.78	11.58
31	I2_AR2	ActiveIntronRegion	0	8.09	19.85	15.42	15.16	6.92	8.78	6.89	6.77	5.18	17.57	1.73	2.12	2.70	5.92	7.73	4.10	5.09	14.45	12.45	11.78	12.86	3.88	11.72
32	E3_Aa	NovelBoundary	0	14.15	15.59	38.05	39.59	37.01	16.64	18.86	16.51	14.73	48.57	0.00	18.31	12.17	4.83	10.51	4.02	21.88	39.34	17.98	15.15	24.65	26.02	7.34
33	ER3a	ExonRegion	0	15.00	22.70	43.02	36.64	15.29	24.35	13.12	30.43	31.19	54.93	11.24	13.42	12.25	29.05	36.42	23.76	23.77	61.11	34.63	31.64	48.08	20.80	29.01
34	E3_Da	NovelBoundary	0	20.45	0.00	10.53	8.99	4.33	5.51	1.85	7.06	9.40	13.78	2.26	0.00	13.47	9.65	13.35	8.63	9.54	11.73	3.58	9.33	53.75	31.72	29.71
35	I3	Intron	0	7.23	1.67	4.86	5.00	3.69	3.98	2.81	5.75	6.98	11.48	2.51	3.84	1.93	7.85	9.77	10.11	8.89	3.56	3.77	3.25	28.08	7.02	14.52
36	I3_SR1	SilentIntronRegion	0	11.91	1.65	5.52	4.76	5.45	4.30	3.43	6.03	6.48	10.65	4.32	1.76	1.46	8.11	9.76	10.85	9.89	6.09	3.24	5.31	33.10	6.67	14.07
37	I3_AR1	ActiveIntronRegion	0	9.02	1.59	5.22	5.07	4.79	3.48	2.27	6.81	6.39	11.71	4.12	5.63	0.42	7.44	9.93	15.42	8.99	2.83	1.93	3.74	30.23	9.58	16.76
38	I3_SR2	SilentIntronRegion	0	8.33	2.86	7.80	5.29	2.20	3.33	5.81	7.07	16.00	17.89	6.95	9.24	4.86	8.20	15.86	17.90	20.09	5.67	7.41	4.41	42.09	13.09	33.78
39	I3_AR2	ActiveIntronRegion	0	8.47	0.00	5.60	3.89	4.20	1.83	6.24	3.46	13.76	17.04	8.28	4.33	9.38	5.10	12.85	8.92	26.88	3.70	3.19	5.47	54.78	12.50	35.24
40	I3_SR3	SilentIntronRegion	0	6.35	1.62	4.55	5.01	3.40	4.08	2.64	5.47	6.58	11.13	1.75	3.43	2.04	7.89	9.38	8.65	8.03	3.28	3.92	2.87	26.25	6.23	12.95
41	ER4a	ExonRegion	0	21.03	6.91	5.11	3.18	2.29	19.90	8.85	8.53	4.37	4.73	10.15	0.00	0.10	19.46	28.17	3.41	5.98	8.43	28.00	8.33	7.21	5.56	2.14
42	E4_Da	NovelBoundary	0	0.00	0.00	1.42	1.76	4.33	0.00	0.00	0.00	0.00	0.00	2.68	0.00	6.82	4.59	4.45	0.00	0.00	3.48	0.00	0.00	6.30	0.00	16.82
43	E4a_E5a	KnownJunction	0	92.24	24.80	23.24	14.85	8.15	59.23	36.26	22.88	17.42	10.45	26.38	0.00	0.00	55.80	68.36	12.90	20.76	28.48	65.04	18.86	18.59	17.51	14.51
44	E4a_E6a	NovelJunction	0	3.78	0.00	0.00	0.00	0.00	0.00	0.00	5.05	0.00	1.58	7.16	0.00	0.00	7.42	4.45	0.00	4.68	0.00	0.00	0.00	20.94	0.00	8.54
45	I4	Intron	0	10.19	3.33	9.60	7.83	9.68	4.01	7.01	8.53	9.61	13.89	13.13	12.93	7.35	26.33	24.56	24.55	22.31	7.34	8.27	5.59	35.57	13.30	14.74
46	I4_SR1	SilentIntronRegion	0	5.51	1.18	5.86	4.72	3.99	2.20	3.16	5.60	5.67	8.25	7.14	2.61	1.55	17.09	18.16	14.71	11.48	7.18	5.53	4.08	22.30	6.92	7.38
47	I4_AR1	ActiveIntronRegion	0	11.89	5.20	12.78	11.16	13.48	4.20	9.25	9.73	13.24	17.71	15.64	15.65	8.03	31.17	25.29	29.31	27.12	6.37	9.89	6.24	41.27	18.39	17.44
48	I4_SR2	SilentIntronRegion	0	18.40	3.82	10.72	6.68	14.46	8.62	11.20	13.32	9.95	18.47	22.70	34.10	21.85	38.25	40.83	38.40	38.79	10.80	11.23	8.00	56.43	16.16	27.57
49	E5_Aa	NovelBoundary	0	6.67	0.00	17.53	5.19	4.24	24.93	4.37	9.53	19.56	15.71	19.58	25.21	27.76	72.99	44.50	63.83	22.53	0.00	4.52	0.00	47.32	2.27	32.44
50	ER5a	ExonRegion	0	33.29	7.60	17.85	19.90	20.76	25.27	12.66	19.91	19.49	31.73	27.52	25.39	25.40	51.53	50.26	28.12	28.01	24.79	24.53	9.05	47.89	19.67	18.90
51	E5_Da	NovelBoundary	0	41.41	8.42	17.12	3.76	0.00	5.56	8.74	19.84	13.34	17.73	53.43	37.21	6.66	46.62	68.24	55.28	49.18	17.49	17.13	18.54	67.21	8.76	31.67
52	E5a_E6a	KnownJunction	0	16.52	2.96	29.69	30.70	4.16	2.61	6.01	26.08	15.77	35.11	31.43	6.30	0.00	25.19	24.11	7.78	15.99	24.58	28.05	12.78	27.06	5.76	0.00
53	I5	Intron	0	9.26	3.04	17.47	9.03	7.10	8.53	6.41	13.94	11.58	19.28	15.25	4.96	3.38	31.05	28.97	26.71	20.05	13.74	8.19	9.79	37.04	11.04	17.14
54	I5_SR1	SilentIntronRegion	1	7.33	2.24	13.17	8.39	6.73	7.43	6.18	8.98	9.92	15.87	15.27	5.04	4.17	30.71	27.40	24.63	20.91	11.05	9.56	9.12	35.33	8.66	16.27
55	I5_AR1	ActiveIntronRegion	0	7.75	2.08	16.48	5.97	6.50	7.78	4.57	13.02	13.44	23.65	9.31	3.05	4.34	31.10	24.92	28.01	19.06	12.02	5.53	7.51	38.15	10.71	19.01
56	I5_SR2	SilentIntronRegion	1	10.28	4.16	21.03	10.15	8.00	9.64	7.05	17.13	12.89	20.97	16.25	5.07	2.63	30.89	30.25	28.31	18.99	17.06	7.25	10.95	38.91	13.70	17.85
57	I5_AR2	ActiveIntronRegion	0	19.01	1.83	23.35	11.14	3.76	9.44	6.65	27.77	9.72	22.51	19.14	7.43	1.46	34.98	39.18	26.94	24.41	10.45	10.96	10.23	32.57	7.96	14.01
58	E6_Aa	NovelBoundary	0	24.82	6.25	27.23	33.46	4.33	5.68	7.77	19.96	9.29	23.42	24.53	0.00	6.17	31.20	42.03	34.35	25.81	18.49	4.52	5.69	12.73	8.39	22.62
59	ER6a	ExonRegion	0	24.41	3.86	37.01	29.64	10.97	21.82	5.76	26.29	17.80	42.47	35.57	17.06	5.83	60.67	84.75	54.16	50.08	47.03	33.59	20.16	41.63	27.49	30.40
60	E6_Da	NovelBoundary	0	6.67	9.60	10.59	14.65	3.90	5.39	10.47	13.27	14.26	21.70	16.79	5.70	6.82	9.83	30.41	22.99	13.74	7.25	4.42	9.08	24.83	16.29	14.00
61	E6a_E9a	KnownJunction	0	6.08	3.16	14.93	12.05	4.33	16.47	2.21	10.23	14.76	24.79	15.42	12.30	0.00	24.66	13.72	8.72	22.53	21.64	0.00	6.01	11.61	6.12	3.67
62	E7_Aa	NovelBoundary	0	10.89	6.71	18.95	23.21	15.70	14.88	14.53	5.75	6.11	12.14	9.79	6.00	5.68	36.14	6.30	12.05	18.14	17.20	0.00	6.20	39.04	7.84	11.78
63	ER7a	ExonRegion	0	21.80	3.76	24.39	18.73	11.31	18.41	10.48	14.29	14.02	28.39	29.34	13.35	15.70	48.80	57.86	43.98	23.43	23.93	16.83	9.00	42.33	21.42	23.96
64	E7_Da	NovelBoundary	0	35.71	0.00	48.43	27.44	4.24	10.39	0.00	31.38	41.00	36.77	22.53	6.30	19.97	26.55	60.45	15.38	21.51	15.88	0.00	16.23	26.75	29.09	11.87
65	I7	Intron	1	31.66	7.53	28.61	21.70	17.92	22.99	13.01	17.61	15.99	26.78	34.14	13.86	24.33	57.62	57.91	40.22	22.57	17.01	8.62	12.73	45.19	19.89	26.77
66	I7_AR1	ActiveIntronRegion	1	31.83	7.57	28.78	21.82	18.02	23.11	13.09	17.71	16.08	26.93	34.33	13.92	24.45	57.93	58.22	40.45	22.70	17.10	8.67	12.80	45.43	20.00	26.92
67	ER8a	ExonRegion	0	0.00	0.00	5.64	1.36	0.00	0.00	0.79	0.69	1.98	1.61	9.28	3.46	1.88	6.17	3.48	1.19	3.30	3.33	0.00	0.00	7.93	2.08	2.94
68	I8	Intron	1	20.16	4.70	28.11	21.89	14.68	20.65	8.16	18.34	14.88	24.18	34.78	8.55	19.44	60.69	68.94	52.05	31.76	26.68	15.94	15.97	44.53	19.85	26.56
69	I8_AR1	ActiveIntronRegion	1	14.53	7.40	21.29	24.81	16.93	26.14	10.82	18.63	14.44	29.78	36.63	6.39	17.66	62.41	56.01	55.63	27.18	30.82	16.13	15.86	55.37	25.09	30.53
70	I8_AR2	ActiveIntronRegion	1	16.44	6.88	31.39	37.74	19.14	34.70	15.28	31.51	26.32	38.73	57.84	20.65	24.53	89.45	81.46	72.47	52.31	38.80	13.48	28.64	76.62	27.09	25.30
71	I8_AR3	ActiveIntronRegion	1	12.80	7.21	36.82	29.61	13.87	23.01	11.25	30.96	25.43	35.87	49.73	17.32	19.40	75.08	68.97	64.31	46.81	34.77	13.90	37.72	66.61	25.10	29.23
72	I8_AR4	ActiveIntronRegion	1	6.93	4.62	39.43	25.83	21.53	20.92	8.30	32.05	24.87	32.37	43.84	6.69	28.99	62.45	112.36	74.44	40.96	39.31	20.27	30.85	62.30	33.72	43.25
73	I8_SR1	SilentIntronRegion	1	13.16	2.76	32.82	21.02	15.39	14.40	8.40	19.06	14.76	23.39	42.22	8.69	27.03	65.68	76.76	55.37	38.13	25.26	17.28	18.66	46.51	22.54	27.35
74	I8_AR5	ActiveIntronRegion	1	34.99	3.81	26.66	17.53	11.07	20.68	4.69	12.92	11.75	16.49	21.19	8.40	12.13	50.38	66.19	39.95	24.81	21.01	14.55	7.59	25.78	9.84	20.19
75	E9_Aa	NovelBoundary	0	27.12	3.16	23.21	14.78	23.34	7.72	14.35	21.32	8.97	22.78	19.58	0.00	0.00	50.39	38.82	27.34	32.07	23.21	4.14	14.13	25.58	11.63	22.37
76	ER9a	ExonRegion	0	32.28	9.78	47.38	35.16	9.51	22.51	9.25	32.22	23.68	42.46	46.16	15.12	5.86	58.81	77.05	46.28	36.74	37.55	14.79	16.95	62.35	14.96	26.51
77	E9_Ab	KnownBoundary	0	25.71	27.96	138.85	143.84	16.04	48.27	46.46	79.48	117.71	163.97	96.23	19.21	6.82	107.89	141.42	143.55	61.06	179.58	44.61	67.30	154.07	39.62	74.35
78	ER9b	ExonRegion	0	28.18	12.36	83.83	67.07	25.92	31.04	12.46	60.86	54.68	68.89	64.37	16.58	18.24	83.31	119.53	78.92	39.94	62.30	27.79	34.37	114.28	34.54	43.42
79	E9_Da	KnownBoundary	0	52.97	14.14	100.56	99.82	24.19	26.97	7.73	77.92	53.41	74.25	85.55	24.91	13.64	79.05	147.72	89.12	47.78	44.89	38.02	49.28	124.30	38.58	39.01
80	ER9c	ExonRegion	0	49.94	10.72	41.01	25.84	4.81	14.90	8.71	28.63	24.31	34.51	34.09	9.04	8.82	34.87	55.64	33.05	22.65	13.33	11.27	15.71	52.55	16.64	22.35
81	IG29_AR5	ActiveIntergenicRegion	0	13.64	8.13	17.97	16.96	0.00	7.34	0.00	5.19	3.71	3.70	1.93	18.76	0.00	3.97	13.22	4.29	0.37	6.57	9.56	16.08	0.00	0.00	0.00
82	IG29_AR6	ActiveIntergenicRegion	0	19.67	6.50	24.89	16.63	17.04	12.34	5.92	4.93	7.93	11.81	17.59	21.16	8.83	20.46	27.13	11.14	7.08	12.93	10.31	9.19	6.45	2.87	4.04
83	IG29_SR3	SilentIntergenicRegion	0	1.08	3.53	7.00	5.84	5.07	15.37	1.99	8.61	16.11	8.45	1.83	5.76	4.12	4.46	7.65	9.48	3.13	3.57	9.44	7.70	8.96	4.52	5.88
84	IG29_AR8	ActiveIntergenicRegion	0	5.38	3.26	12.89	5.48	3.61	8.22	1.71	10.43	23.34	6.25	3.61	2.89	10.66	9.15	14.91	4.46	5.62	4.46	8.86	14.63	16.03	4.40	8.40
85	IG29_AR9	ActiveIntergenicRegion	0	0.42	0.64	5.40	0.77	2.32	3.43	0.62	4.14	5.80	0.62	0.76	0.00	0.00	3.58	5.70	2.17	1.04	5.77	3.37	4.14	8.83	1.29	6.87