Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C8orf31	Gene	0	14.08	6.57	14.17	3.12	4.40	1.88	5.63	7.29	9.18	1.61	1.61	2.80	2.86	17.21	33.71	19.54	3.82	3.99	3.43	15.19	9.55	9.26	23.34
2	423769	Transcript	0	0.00	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.00	0.00	0.00	2.61	4.39	0.17	0.00	0.00	0.00	2.66	0.00	0.00	0.00
3	395172	Transcript	0	39.14	16.23	11.94	3.09	16.44	8.75	25.69	3.61	10.23	4.06	8.37	14.52	14.84	14.00	21.42	17.83	19.81	5.55	14.69	28.35	18.26	14.56	30.24
4	316682	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	7.15	2.56	8.31	1.32	0.89	0.00	0.22	4.72	5.77	0.57	0.00	0.00	0.00	18.47	36.24	39.38	0.00	8.06	0.53	8.16	7.30	7.10	27.64
6	E1a_E2a	KnownJunction	0	9.85	3.35	8.46	0.00	3.99	0.00	0.00	1.85	3.56	0.00	0.00	0.00	0.00	17.72	8.90	15.72	0.00	0.00	0.00	6.39	0.00	3.12	7.68
7	E1a_E3b	NovelJunction	0	0.00	0.00	10.11	0.00	0.00	0.00	0.00	2.26	2.78	0.00	0.00	0.00	0.00	7.18	15.70	7.35	0.00	2.20	0.00	0.00	2.53	3.00	7.77
8	I1	Intron	0	1.15	1.11	3.73	0.62	0.55	0.12	0.41	1.75	1.75	0.58	0.00	0.00	0.00	7.55	13.06	5.87	0.00	0.84	0.22	4.20	3.30	1.92	6.10
9	I1_SR1	SilentIntronRegion	0	1.35	1.73	2.50	1.19	0.30	0.21	0.74	2.40	1.53	0.52	0.00	0.00	0.00	8.40	14.74	8.82	0.00	0.71	0.00	5.99	3.59	2.18	5.67
10	I1_AR2	ActiveIntronRegion	0	0.54	0.79	7.52	0.22	2.03	0.00	0.50	1.47	2.30	0.65	0.00	0.00	0.00	8.74	15.38	3.13	0.00	1.79	0.21	3.58	2.96	1.07	9.41
11	I1_SR2	SilentIntronRegion	0	1.57	0.66	3.92	0.30	0.40	0.00	0.20	1.53	1.48	0.25	0.00	0.00	0.00	4.68	13.83	2.91	0.00	0.16	0.31	0.76	4.07	0.93	5.20
12	E2_Aa	NovelBoundary	0	0.00	0.00	7.75	1.66	0.00	0.00	0.00	5.75	4.22	2.26	0.00	0.00	0.00	2.47	24.11	8.72	0.00	6.34	0.00	5.37	5.68	0.00	12.04
13	ER2a	ExonRegion	0	2.73	1.85	8.28	0.18	7.14	0.00	0.00	3.92	6.01	0.46	0.00	0.00	0.00	17.11	21.40	18.76	0.00	0.00	0.00	6.29	6.61	1.71	21.80
14	E2_Ab	KnownBoundary	0	3.70	6.58	16.65	0.00	10.95	0.00	0.00	6.45	7.87	2.10	0.00	0.00	0.00	7.06	27.20	26.57	0.00	0.00	0.00	12.72	11.37	2.76	36.19
15	ER2b	ExonRegion	0	4.41	1.94	4.01	1.25	1.04	0.00	0.00	4.01	4.21	1.81	0.00	0.00	0.00	15.57	43.55	9.65	0.00	1.65	0.00	4.96	7.10	2.18	11.61
16	E2_Da	NovelBoundary	0	6.59	5.20	21.38	3.33	0.00	0.00	0.00	11.25	14.96	1.42	0.00	0.00	0.00	17.07	41.66	11.62	0.00	0.00	0.00	8.18	8.40	0.00	7.60
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00	5.12	8.78	0.00	0.00	0.00	0.00	3.20	0.00	0.00	0.00
19	I2	Intron	0	1.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.39	25.88	6.06	0.00	1.26	0.00	2.89	1.50	2.83	5.99
20	I2_AR1	ActiveIntronRegion	0	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.54	26.55	6.23	0.00	1.29	0.00	2.97	1.54	2.91	6.15
21	E3_Aa	NovelBoundary	0	3.41	5.53	12.12	3.56	0.00	11.58	2.25	1.64	3.21	0.00	0.00	0.00	0.00	10.30	30.04	20.59	0.00	3.86	0.00	0.00	3.15	0.00	12.55
22	E3_Ab	NovelBoundary	0	3.78	3.35	13.36	5.36	0.00	0.00	0.00	4.93	12.21	1.50	0.00	0.00	0.00	0.00	5.81	4.36	0.00	2.32	0.00	3.00	2.90	2.94	4.35
23	ER3a	ExonRegion	0	0.00	0.00	7.66	1.79	0.00	0.00	0.00	0.11	2.86	0.00	0.00	0.00	0.00	1.52	10.88	1.49	0.00	0.00	0.00	2.26	3.17	2.08	0.55
24	ER3b	ExonRegion	0	4.69	4.41	23.94	4.17	4.87	0.00	0.91	6.71	7.34	0.56	0.00	0.00	0.00	23.26	51.12	15.46	0.00	7.00	0.00	13.48	8.79	5.18	13.67
25	E3_Da	NovelBoundary	0	3.78	0.00	1.39	0.00	0.00	0.00	0.00	10.93	3.01	0.00	0.00	0.00	0.00	4.89	28.80	7.78	0.00	0.00	0.00	6.01	0.00	0.00	4.35
26	E3a_E5a	KnownJunction	0	3.56	5.53	20.43	5.23	0.00	0.00	1.68	4.68	8.83	1.67	0.00	0.00	0.00	13.77	42.52	7.52	0.00	17.16	0.00	2.88	6.30	3.12	4.35
27	ER4a	ExonRegion	0	0.00	0.00	0.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.09	0.00	0.33	0.00	0.00	0.00	2.13	0.00	0.00	0.00
28	I4	Intron	0	0.99	0.71	2.35	0.48	0.31	0.00	0.00	6.33	2.80	0.60	0.00	0.00	0.00	5.34	17.81	5.56	0.00	1.50	0.00	2.99	2.06	1.46	5.15
29	I4_AR1	ActiveIntronRegion	1	0.00	0.00	1.11	0.00	0.00	0.00	0.00	1.93	2.32	0.98	0.00	0.00	0.00	1.93	19.27	1.91	0.00	0.00	0.00	1.82	0.00	1.84	6.08
30	I4_SR1	SilentIntronRegion	0	1.10	0.79	2.49	0.53	0.35	0.00	0.00	6.83	2.86	0.56	0.00	0.00	0.00	5.73	17.73	5.98	0.00	1.67	0.00	3.13	2.29	1.43	5.08
31	E5_Aa	NovelBoundary	0	0.00	2.63	1.71	0.00	0.00	0.00	0.00	2.34	0.00	0.00	0.00	0.00	0.00	5.53	18.79	3.33	0.00	2.57	0.00	0.00	0.00	0.00	8.71
32	ER5a	ExonRegion	0	6.01	3.65	27.29	5.08	0.00	0.00	1.54	14.46	13.15	1.27	0.00	0.00	0.00	34.33	93.72	44.16	0.00	6.88	2.88	19.80	11.89	5.38	23.94
33	E5a_E6a	KnownJunction	0	0.00	3.35	14.31	0.00	0.00	0.00	0.00	2.22	9.00	0.00	0.00	0.00	0.00	3.00	4.94	0.00	0.00	2.45	0.00	5.24	0.00	0.00	3.93
34	I5	Intron	0	2.02	1.67	3.72	0.79	0.23	0.08	0.29	4.80	5.74	1.04	0.00	0.00	0.00	2.67	13.27	5.92	0.00	1.87	0.14	6.45	1.34	1.35	6.10
35	I5_SR1	SilentIntronRegion	0	2.13	1.75	4.02	0.87	0.26	0.09	0.32	5.30	6.34	1.14	0.00	0.00	0.00	2.89	14.17	6.40	0.00	2.07	0.15	7.02	1.48	1.50	6.60
36	E6_Aa	NovelBoundary	0	12.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.19	0.00	0.00	0.00	0.00	0.00	14.09	8.20	0.00	0.00	0.00	0.00	3.15	0.00	0.00
37	ER6a	ExonRegion	0	8.16	1.72	11.70	1.35	0.98	0.33	0.75	3.80	8.69	0.46	0.00	0.00	0.00	28.98	39.75	8.55	0.00	1.93	0.00	7.23	4.90	8.87	13.35
38	E6a_E7a	KnownJunction	0	14.67	6.12	10.50	1.40	4.16	2.67	0.00	4.19	3.30	1.67	0.00	0.00	0.00	18.31	72.32	8.72	0.00	0.00	0.00	3.26	17.92	21.43	24.50
39	I6	Intron	0	2.48	0.95	5.12	0.95	0.83	0.14	0.62	3.62	4.88	0.00	0.00	0.00	0.00	6.17	14.61	10.43	0.00	2.36	0.25	4.81	2.06	0.81	2.98
40	I6_SR1	SilentIntronRegion	0	2.48	0.95	5.12	0.95	0.83	0.14	0.62	3.62	4.88	0.00	0.00	0.00	0.00	6.17	14.61	10.43	0.00	2.36	0.25	4.81	2.06	0.81	2.98
41	E7_Aa	NovelBoundary	0	14.89	0.00	29.72	2.06	0.00	0.00	2.25	4.39	3.44	0.00	0.00	0.00	0.00	2.12	20.89	19.82	0.00	0.00	0.00	6.07	13.78	5.45	13.83
42	ER7a	ExonRegion	0	10.56	6.09	15.97	4.06	1.60	0.47	1.14	10.04	10.61	1.29	0.00	0.00	0.00	13.04	22.84	9.99	0.00	1.37	0.68	14.00	7.05	10.66	22.81
43	E7_Da	KnownBoundary	0	7.19	2.43	12.71	7.29	0.00	0.00	0.00	0.00	12.01	0.00	0.00	0.00	0.00	7.00	24.11	12.05	0.00	2.32	0.00	19.56	3.03	6.18	29.96
44	ER7b	ExonRegion	0	39.14	16.23	11.94	3.09	16.44	8.75	25.69	3.61	10.23	4.06	8.37	14.52	14.84	14.00	21.42	17.83	19.81	5.55	14.69	28.35	18.26	14.56	30.24
45	IG25_SR1	SilentIntergenicRegion	0	1.91	2.74	0.14	0.30	5.62	0.00	0.00	0.13	0.26	0.00	0.00	0.00	0.00	4.33	8.81	2.46	0.00	0.00	0.00	6.70	1.39	0.00	13.92
46	IG25_AR1	ActiveIntergenicRegion	0	14.55	11.01	19.64	2.88	2.23	0.22	0.64	9.98	9.01	1.25	0.00	0.00	0.25	7.28	17.29	7.18	0.21	1.91	0.00	8.38	4.75	12.18	11.97
47	IG25_SR2	SilentIntergenicRegion	0	2.12	5.29	21.93	1.36	0.00	0.00	0.00	6.91	6.18	0.00	0.00	0.00	0.00	1.62	17.12	6.54	0.00	1.85	0.00	9.15	6.61	6.25	5.87
48	IG25_AR2	ActiveIntergenicRegion	0	8.45	5.77	13.55	4.28	2.50	0.00	0.41	4.20	2.80	0.18	0.00	0.00	0.00	5.45	15.11	2.54	0.00	0.32	0.00	5.84	1.60	6.07	6.13