Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A32 Gene 0 16.35 19.07 16.10 23.02 30.46 51.97 31.34 20.80 20.86 33.46 87.72 105.80 89.78 95.73 55.68 73.56 88.16 20.56 20.66 29.18 31.80 55.43 36.21 2 297578 Transcript 0 32.31 36.20 31.50 46.66 69.93 103.01 67.85 44.49 48.11 78.36 216.67 253.44 228.99 241.85 125.54 170.20 214.29 44.19 46.16 72.10 73.24 135.19 76.12 3 ER1a ExonRegion 1 5.97 9.21 7.49 7.22 7.63 51.80 17.72 7.02 11.06 14.48 54.58 6.51 5.77 83.57 51.51 57.43 65.07 27.20 12.83 25.15 44.59 28.48 30.76 4 E1_Da NovelBoundary 0 2.82 0.00 3.87 0.00 0.00 2.67 3.93 5.09 4.31 8.95 14.42 0.00 6.33 5.30 0.00 3.59 11.97 12.35 0.00 5.62 8.77 11.76 15.11 5 E1a_E2a KnownJunction 0 13.48 18.48 14.58 22.01 36.59 201.93 66.07 15.20 22.16 48.70 98.34 37.66 67.20 186.00 96.05 142.27 135.58 61.19 9.22 64.11 55.60 52.84 46.44 6 I1_SR1 SilentIntronRegion 0 1.90 1.97 3.87 1.54 3.33 0.99 5.07 0.56 1.94 3.08 1.16 27.27 16.96 3.03 2.39 6.42 2.45 2.29 0.69 2.73 3.24 1.91 1.90 7 I1_SR2 SilentIntronRegion 0 1.88 0.60 1.34 1.40 0.84 1.75 3.05 2.04 2.57 2.62 4.43 17.88 19.87 2.17 2.77 5.14 6.04 2.32 3.33 4.31 2.41 1.85 3.07 8 I1_AR3 ActiveIntronRegion 0 4.11 3.07 3.33 1.82 3.64 2.34 7.97 1.30 3.23 3.92 4.71 12.31 18.22 3.59 2.53 4.21 7.69 4.21 3.44 3.38 4.72 3.07 4.33 9 ER2a ExonRegion 0 20.66 28.85 34.56 41.22 69.04 182.76 83.00 42.82 43.19 78.44 222.31 150.30 143.78 251.65 111.53 207.38 223.70 60.47 43.58 91.36 90.51 139.40 76.47 10 E2_Da NovelBoundary 0 3.78 0.00 2.90 5.39 7.81 2.78 1.90 2.14 9.84 4.84 11.85 18.31 20.29 15.13 0.00 3.85 0.00 3.81 4.52 6.52 2.59 20.57 7.85 11 E2a_E3a KnownJunction 0 48.01 32.69 36.19 39.32 50.00 82.74 55.29 38.16 60.53 77.87 306.29 156.35 173.20 289.66 99.14 207.81 277.89 44.06 48.57 111.79 85.38 171.15 89.20 12 E2a_E4a NovelJunction 0 0.00 0.00 0.00 4.10 3.65 0.00 0.00 1.60 4.34 8.97 21.27 0.00 0.00 10.30 9.27 12.22 0.00 2.57 0.00 2.62 8.71 11.45 8.11 13 I2 Intron 0 6.78 4.67 7.50 8.97 8.10 5.35 12.87 7.00 7.48 8.46 15.58 34.48 37.98 11.27 7.51 11.10 18.51 7.17 2.95 7.57 8.42 12.43 8.24 14 I2_AR1 ActiveIntronRegion 0 2.57 5.37 4.61 7.16 10.15 6.39 8.36 7.10 3.21 6.08 6.90 35.17 29.95 11.67 5.76 6.65 8.69 3.36 3.21 7.56 3.21 10.56 5.55 15 I2_SR1 SilentIntronRegion 0 5.19 6.53 7.24 9.60 7.82 5.31 13.92 7.63 7.30 9.63 17.95 45.52 43.64 9.51 5.67 10.45 18.59 8.26 2.70 7.54 10.12 16.56 10.16 16 I2_AR2 ActiveIntronRegion 0 5.99 3.60 11.24 10.59 8.40 4.41 16.76 6.58 9.76 11.19 16.22 38.01 43.71 16.36 6.94 12.53 25.14 12.89 1.47 7.17 13.06 13.12 9.31 17 I2_SR2 SilentIntronRegion 0 3.07 3.17 3.74 2.65 5.12 4.41 11.28 5.64 3.99 0.62 3.80 22.93 20.77 5.48 9.25 8.33 3.52 0.79 2.38 2.31 2.06 7.51 2.58 18 I2_AR3 ActiveIntronRegion 0 13.59 3.26 7.98 10.33 9.01 4.80 13.57 8.43 8.51 8.12 18.04 24.17 37.78 10.95 10.29 14.43 24.90 7.39 4.50 9.21 7.82 10.75 7.78 19 I2_SR4 SilentIntronRegion 0 4.36 4.82 6.91 8.53 6.68 8.21 10.07 5.32 10.28 9.10 20.02 25.98 34.17 10.27 8.50 10.17 15.09 1.92 1.41 8.69 6.06 9.32 6.76 20 E3_Aa NovelBoundary 1 6.89 5.00 11.53 13.72 0.00 21.46 7.82 6.70 9.55 14.88 22.64 12.30 71.42 9.01 19.16 7.86 12.81 0.00 3.67 9.65 10.87 19.10 7.94 21 ER3a ExonRegion 0 21.21 36.23 22.11 45.29 39.36 95.04 49.54 46.05 56.63 79.19 292.50 227.40 179.20 265.66 142.23 162.46 274.47 53.22 69.11 88.52 122.38 169.95 76.11 22 E3_Da NovelBoundary 0 3.33 6.58 2.34 3.86 0.00 0.00 12.37 2.22 8.30 9.56 22.85 54.47 6.66 4.65 16.56 27.69 33.94 4.81 4.80 11.70 5.75 2.94 22.19 23 E3a_E4a KnownJunction 0 3.33 26.64 24.69 41.79 44.40 31.57 38.16 44.36 39.15 77.71 122.19 237.83 196.09 241.63 131.78 145.77 178.49 43.11 44.42 61.10 69.81 166.19 69.06 24 I3 Intron 0 16.80 9.95 8.85 10.78 13.46 11.17 12.22 10.46 11.64 14.67 16.59 33.00 31.29 14.43 9.94 21.81 18.13 6.37 4.41 8.45 7.62 16.92 9.22 25 I3_SR1 SilentIntronRegion 0 17.81 10.18 6.41 11.31 11.15 9.07 13.76 10.29 11.50 16.10 13.43 30.20 39.88 13.44 9.83 17.61 12.98 3.25 4.12 8.93 5.54 16.92 9.01 26 I3_AR1 ActiveIntronRegion 0 18.09 9.43 13.98 12.03 18.16 14.66 11.17 12.97 13.42 15.45 21.28 37.59 23.13 17.72 10.58 31.35 26.90 12.00 5.40 8.72 11.87 19.78 10.77 27 I3_AR2 ActiveIntronRegion 0 3.81 10.93 2.19 1.22 8.03 9.90 6.34 0.00 4.42 1.01 17.40 32.09 8.94 6.19 7.88 7.13 13.86 2.22 1.91 3.83 2.64 3.75 3.52 28 E4_Aa NovelBoundary 0 49.12 17.96 4.67 17.55 30.39 4.43 23.49 17.87 25.26 16.09 16.32 24.61 26.46 17.25 13.85 37.26 8.70 7.96 0.00 9.20 8.09 27.56 11.69 29 ER4a ExonRegion 0 33.72 53.10 46.15 60.77 73.49 101.28 82.83 56.72 66.86 103.33 279.24 332.97 291.10 300.52 136.88 202.07 242.56 45.83 63.35 87.23 95.83 164.77 87.41 30 E4_Da NovelBoundary 0 17.41 3.29 3.25 9.56 15.11 11.13 4.02 6.53 17.10 8.76 12.53 12.90 19.64 17.07 8.90 16.15 4.39 0.00 0.00 9.27 12.11 5.45 7.68 31 E4a_E5a KnownJunction 0 30.15 33.09 42.81 61.90 104.33 82.23 94.68 47.85 61.17 112.74 292.18 369.87 304.85 353.41 166.88 235.49 237.21 48.75 71.53 86.48 94.40 191.60 92.36 32 I4 Intron 0 6.60 5.75 4.82 9.74 11.17 10.03 12.90 11.37 7.86 13.04 13.63 26.97 31.75 12.44 6.67 14.40 10.61 4.82 3.36 7.45 3.28 13.70 6.76 33 I4_AR1 ActiveIntronRegion 0 6.61 5.77 4.83 9.76 11.19 10.05 12.92 11.39 7.87 13.06 13.66 27.02 31.81 12.46 6.69 14.43 10.62 4.83 3.37 7.47 3.28 13.72 6.78 34 E5_Aa NovelBoundary 1 18.45 15.98 14.37 9.52 11.88 5.79 20.54 26.45 5.09 16.71 14.85 18.31 79.70 13.77 13.35 28.45 7.67 8.75 4.24 23.65 6.30 26.94 22.71 35 ER5a ExonRegion 0 39.29 37.14 36.84 60.59 103.70 144.56 99.04 54.10 56.79 94.39 270.47 370.21 339.74 289.04 132.13 191.49 259.93 37.55 45.96 82.38 79.62 126.31 105.72 36 E5_Da NovelBoundary 0 20.82 6.31 7.30 5.96 12.22 26.29 16.16 14.58 0.00 12.54 7.69 0.00 34.09 0.00 0.00 3.93 8.32 0.00 4.71 0.00 0.00 9.06 4.01 37 E5a_E6a KnownJunction 0 81.27 53.94 39.35 57.77 110.70 108.23 107.85 78.45 67.10 98.07 267.54 525.62 423.51 290.25 236.11 229.34 264.42 51.19 57.13 68.07 64.56 179.84 101.24 38 E5a_E7a NovelJunction 0 0.00 0.00 1.36 3.86 0.00 8.63 1.77 0.00 1.65 4.35 0.00 12.60 6.66 17.72 0.00 0.00 0.00 1.87 0.00 0.00 2.78 0.00 0.00 39 I5 Intron 0 2.32 2.23 2.67 4.46 13.70 8.72 12.10 5.65 3.36 2.81 3.53 5.21 26.43 2.39 3.43 2.17 4.22 0.34 0.58 5.06 0.00 4.95 3.22 40 I5_SR1 SilentIntronRegion 0 2.34 2.25 2.69 4.48 13.79 8.78 12.19 5.69 3.39 2.83 3.56 5.25 26.62 2.40 3.46 2.19 4.25 0.34 0.59 5.09 0.00 4.99 3.23 41 E6_Aa NovelBoundary 0 6.37 11.91 2.99 4.86 18.85 18.68 14.44 5.83 8.36 6.69 4.79 13.80 18.99 5.06 8.90 11.79 19.82 1.87 0.00 2.88 2.53 2.69 0.00 42 ER6a ExonRegion 0 55.73 58.35 45.36 79.24 98.64 116.84 92.60 65.07 63.65 108.48 319.97 401.90 407.81 303.44 174.08 231.38 311.87 48.97 68.81 85.40 86.35 178.34 117.93 43 E6_Da NovelBoundary 1 10.74 3.09 6.95 4.46 27.84 2.90 16.69 8.95 2.86 25.98 4.42 30.76 34.90 17.19 11.00 11.28 52.92 4.48 0.00 2.94 7.78 0.00 8.54 44 E6a_E7a KnownJunction 0 54.75 69.99 48.93 74.85 152.04 115.16 78.70 69.83 66.55 108.20 260.22 415.19 399.32 255.34 125.84 166.88 280.41 43.90 55.81 75.55 55.48 161.35 79.13 45 I6 Intron 0 9.55 8.61 7.10 7.47 14.30 7.63 12.68 8.76 4.73 12.10 6.84 16.22 31.53 6.78 6.79 4.95 10.08 2.11 2.87 11.52 0.76 5.50 1.22 46 I6_AR1 ActiveIntronRegion 0 7.24 4.21 2.50 5.74 10.96 5.64 15.15 5.28 5.45 8.37 5.53 15.39 32.83 8.82 7.10 4.23 5.04 2.41 0.57 10.79 1.43 4.26 1.06 47 I6_SR1 SilentIntronRegion 0 11.06 11.44 10.04 8.61 16.50 8.94 11.20 11.01 4.30 14.53 7.71 16.86 30.92 5.54 6.63 5.43 13.31 1.93 4.34 12.05 0.35 6.32 1.33 48 E7_Aa NovelBoundary 0 3.19 11.77 9.64 5.36 40.24 25.04 20.45 14.09 6.45 15.77 2.68 37.21 25.65 11.60 17.68 0.00 12.90 0.00 0.00 11.82 0.00 2.57 24.41 49 ER7a ExonRegion 0 12.42 12.92 10.41 14.62 19.24 25.04 16.61 12.80 10.52 17.09 30.87 62.91 45.30 33.85 27.85 32.82 34.11 9.01 9.73 10.14 7.55 27.19 17.78 50 IG34 Intergenic 0 4.83 5.87 2.51 8.36 8.58 12.82 15.12 5.92 8.33 8.13 4.99 15.60 15.93 6.94 5.61 6.94 11.71 6.32 2.89 9.82 2.16 3.75 6.17 51 IG34_SR1 SilentIntergenicRegion 0 4.83 5.87 2.51 8.36 8.58 12.82 15.12 5.92 8.33 8.13 4.99 15.60 15.93 6.94 5.61 6.94 11.71 6.32 2.89 9.82 2.16 3.75 6.17