Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATAD2 Gene 0 68.22 182.66 67.71 86.84 154.30 155.44 278.13 112.16 45.70 149.24 303.03 333.19 188.77 283.07 106.41 191.23 267.68 173.33 54.30 183.72 17.94 74.15 32.04 2 439147 Transcript 0 0.00 3.16 0.00 0.00 0.00 0.00 2.08 2.34 1.62 3.65 7.16 0.00 6.82 2.41 0.00 4.36 7.95 11.15 0.00 2.62 0.00 2.76 0.00 3 287394 Transcript 0 96.55 258.43 76.01 103.00 200.60 202.00 365.96 130.52 55.45 174.53 383.25 398.53 227.14 347.35 143.37 251.64 341.52 200.35 72.77 220.88 23.71 91.12 39.40 4 ER1a ExonRegion 1 6.19 13.44 5.97 5.09 31.46 69.05 105.15 9.98 7.57 19.00 95.94 7.60 12.79 120.52 21.18 92.82 112.14 133.31 18.02 83.89 14.15 12.41 28.69 5 E1a_E2a KnownJunction 1 0.00 6.05 19.75 17.01 13.84 7.55 23.67 46.82 20.89 61.35 120.45 53.87 19.15 265.06 56.49 360.93 135.58 421.42 85.74 167.91 19.52 42.68 88.86 6 ER2a ExonRegion 1 18.98 41.65 32.27 22.25 71.35 156.35 246.23 57.21 18.63 79.81 225.15 93.62 85.62 225.17 30.76 186.37 238.53 187.35 35.08 162.66 23.52 30.57 46.43 7 E2a_E3a KnownJunction 1 24.60 64.59 35.51 23.81 37.10 169.05 239.01 46.82 20.86 82.90 307.13 157.10 95.61 251.99 37.70 152.35 333.43 161.05 30.12 165.03 22.49 51.25 25.95 8 ER3a ExonRegion 1 25.10 53.97 30.56 23.17 38.69 117.55 169.44 54.86 25.34 99.21 326.78 190.06 109.65 306.15 38.53 157.88 360.13 172.32 35.55 202.85 26.66 38.67 32.54 9 E3a_E4a KnownJunction 0 22.67 37.76 18.10 24.97 61.55 83.65 127.50 49.58 24.97 98.72 402.37 242.48 153.89 324.09 57.85 187.22 444.88 185.79 37.74 222.50 19.40 44.70 38.84 10 ER4a ExonRegion 1 15.19 39.39 25.06 42.04 57.37 85.43 107.78 61.34 30.69 112.15 396.77 282.90 165.96 299.83 39.48 185.67 398.20 184.54 46.73 219.48 14.74 60.51 36.81 11 E4a_E5a KnownJunction 0 31.12 51.18 30.16 53.91 46.43 88.19 123.48 77.30 31.13 118.25 362.51 346.46 216.87 266.29 55.75 121.93 346.80 141.69 42.82 222.30 5.13 62.58 24.33 12 ER5a ExonRegion 1 19.23 54.08 25.85 52.98 57.96 88.09 188.26 58.25 34.57 106.47 364.53 411.26 208.00 293.30 45.63 190.71 346.98 139.16 57.86 210.00 8.88 62.28 23.35 13 E5a_E6a KnownJunction 0 27.04 79.06 23.24 66.99 57.81 195.97 246.47 64.86 33.39 117.01 403.31 433.79 209.73 306.49 70.46 133.04 363.53 103.43 71.34 261.80 8.09 70.97 10.93 14 ER6a ExonRegion 0 21.84 52.87 37.51 57.02 111.50 169.46 228.62 68.41 36.14 123.19 402.83 451.59 345.46 295.52 53.11 137.39 366.81 109.48 36.70 261.48 12.17 68.57 21.46 15 E6a_E7a KnownJunction 0 18.37 60.91 48.08 49.01 103.99 127.03 205.67 64.49 29.86 136.19 420.21 480.46 433.58 277.89 59.83 169.70 342.40 145.96 65.23 288.52 18.47 42.62 31.58 16 ER7a ExonRegion 1 6.75 45.69 25.05 29.20 48.44 65.05 124.30 40.75 22.69 77.14 242.52 396.29 306.46 259.52 45.69 134.10 236.63 105.29 34.99 159.97 8.96 46.07 21.32 17 E7a_E8a KnownJunction 1 49.56 118.73 56.38 88.97 165.79 144.69 430.37 103.67 55.73 195.72 541.14 771.40 619.12 511.27 64.90 339.91 553.72 333.12 76.14 294.91 26.50 86.16 45.33 18 ER8a ExonRegion 1 23.17 71.24 39.06 57.73 101.47 127.45 249.72 61.55 40.81 133.09 400.59 618.89 463.04 411.05 67.22 276.63 379.10 312.55 72.48 237.49 32.10 80.37 41.01 19 E8a_E9a KnownJunction 0 48.38 72.09 33.38 48.31 71.90 95.85 271.69 53.81 39.55 120.85 291.28 404.08 356.63 408.85 76.64 284.88 358.02 337.89 78.03 185.10 31.07 92.52 48.49 20 ER9a ExonRegion 1 23.24 80.80 23.34 52.32 57.92 107.51 188.98 46.52 32.33 122.11 339.94 454.91 286.70 364.12 39.06 220.07 320.65 309.26 44.77 198.07 30.06 66.15 38.26 21 E9a_E10a KnownJunction 1 36.01 100.38 24.95 44.98 113.75 170.75 270.67 55.24 37.30 115.75 361.93 588.94 233.43 369.65 51.67 223.87 250.96 225.46 58.83 187.92 25.08 105.69 45.07 22 ER10a ExonRegion 1 37.94 141.55 33.94 46.98 96.84 114.37 232.42 70.50 37.42 134.28 373.07 601.32 192.12 382.12 49.77 239.92 363.92 270.36 60.20 210.11 32.51 96.93 41.19 23 E10a_E11a KnownJunction 0 20.67 155.63 28.89 38.56 57.56 133.67 219.00 68.18 35.91 126.28 292.55 399.73 118.99 448.06 87.77 191.32 289.57 258.13 22.31 205.11 16.31 104.71 55.74 24 ER11a ExonRegion 1 32.19 158.97 29.18 37.22 86.87 121.03 258.43 66.63 36.34 122.68 338.97 338.67 171.19 334.75 53.35 194.11 319.28 186.34 45.45 172.10 26.01 69.64 43.77 25 E11a_E12a KnownJunction 1 18.15 177.73 34.65 57.73 128.35 171.89 272.70 86.30 25.14 136.49 315.29 559.08 205.51 432.75 77.38 223.79 358.95 210.71 48.75 200.00 12.60 104.34 32.52 26 I11 Intron 0 15.16 18.57 10.67 5.19 12.90 3.89 13.54 9.79 1.75 4.37 0.42 4.22 10.54 0.76 5.37 3.26 5.31 4.04 2.33 8.08 0.16 0.46 1.50 27 I11_SR1 SilentIntronRegion 0 15.18 18.60 10.69 5.20 12.92 3.89 13.56 9.80 1.75 4.38 0.42 4.23 10.56 0.76 5.38 3.26 5.31 4.04 2.33 8.10 0.16 0.46 1.50 28 ER12a ExonRegion 1 25.85 169.66 45.24 53.41 102.61 132.87 235.75 64.86 35.55 122.84 357.33 367.71 169.11 410.43 68.93 257.50 322.68 269.29 67.64 199.31 25.00 77.80 43.60 29 E12a_E13a KnownJunction 1 45.05 283.77 47.16 62.40 106.45 148.61 256.23 53.72 37.01 129.23 380.83 323.51 87.01 487.73 117.81 355.89 314.63 291.04 111.06 221.03 14.52 90.99 64.88 30 ER13a ExonRegion 0 31.80 169.75 61.94 47.27 118.06 112.52 252.04 57.80 31.68 97.90 331.48 304.33 132.59 358.60 77.88 269.86 322.30 252.81 71.58 208.61 29.34 69.72 42.86 31 E13a_E14a KnownJunction 1 25.12 167.54 43.40 43.92 124.28 105.56 221.39 52.04 30.99 86.90 351.51 254.48 92.04 380.48 66.38 261.64 367.74 219.79 103.53 205.05 50.41 81.01 22.37 32 E13a_E14b KnownJunction 0 0.00 3.16 0.00 0.00 0.00 0.00 2.08 2.34 1.62 3.65 7.16 0.00 6.82 2.41 0.00 4.36 7.95 11.15 0.00 2.62 0.00 2.76 0.00 33 I13_AR1 ActiveIntronRegion 0 13.73 14.46 6.77 8.15 7.43 2.27 25.78 7.17 0.00 1.58 4.18 15.51 13.05 2.56 4.06 7.35 15.28 12.78 7.88 17.10 0.68 0.64 0.91 34 E14_Ab NovelBoundary 1 30.89 115.24 21.20 44.38 76.83 123.22 193.12 40.75 30.84 95.09 267.17 277.59 116.23 340.87 21.14 196.96 215.90 195.37 92.61 168.81 41.21 65.46 31.50 35 ER14a ExonRegion 1 23.28 128.79 29.41 44.35 87.74 104.98 187.56 48.18 28.66 89.94 334.07 257.06 113.34 372.46 51.50 231.95 328.99 225.27 114.41 186.44 45.27 78.65 33.53 36 ER14b ExonRegion 1 30.69 183.64 36.89 50.88 57.63 98.79 176.89 60.70 40.80 123.08 365.20 287.06 149.16 375.39 54.41 263.27 354.68 281.55 91.13 200.81 43.21 83.57 40.08 37 E14_Da KnownBoundary 1 35.41 213.71 53.64 57.90 65.28 171.78 215.60 69.00 39.58 153.01 378.57 295.45 163.30 458.00 52.91 199.86 367.93 274.84 79.44 211.37 36.70 66.19 31.24 38 ER14c ExonRegion 1 35.86 148.27 39.75 50.59 60.76 151.94 174.06 65.38 35.78 143.50 361.57 276.07 156.01 406.03 53.93 215.83 358.44 261.89 71.67 214.08 34.74 64.41 42.58 39 E14b_E15a KnownJunction 1 45.19 146.68 36.72 53.01 70.29 150.71 185.22 70.15 37.90 147.39 296.39 296.20 181.97 386.37 49.94 215.07 347.64 229.69 58.83 220.83 28.54 69.26 54.97 40 ER15a ExonRegion 1 23.84 130.13 31.86 49.14 96.15 129.66 244.48 67.85 42.79 130.86 395.67 274.85 197.08 365.80 62.90 265.14 361.97 224.45 83.73 189.24 29.01 86.78 36.43 41 E15_Da NovelBoundary 1 0.00 18.22 6.09 1.63 15.03 18.00 57.28 11.83 7.70 10.50 46.54 50.42 88.63 23.90 21.63 32.73 44.23 17.99 0.00 33.43 0.00 7.90 4.35 42 E15a_E16a KnownJunction 1 41.19 124.39 27.35 70.65 79.03 103.52 267.49 50.32 38.17 139.01 354.98 233.48 139.11 255.28 43.14 211.82 301.45 220.16 88.10 183.12 21.07 97.42 40.21 43 I15 Intron 0 11.96 9.25 2.52 4.20 10.33 14.15 40.71 9.94 4.06 10.37 19.45 44.20 47.93 16.20 9.72 16.39 21.84 10.42 3.51 21.12 1.22 9.76 3.24 44 I15_SR1 SilentIntronRegion 0 12.03 9.30 2.53 4.22 10.38 14.23 40.92 9.99 4.08 10.42 19.55 44.44 48.17 16.29 9.76 16.47 21.96 10.47 3.53 21.23 1.22 9.82 3.26 45 ER16a ExonRegion 1 36.37 132.32 42.56 70.63 102.69 153.20 266.47 90.59 43.43 141.90 412.21 304.93 168.26 373.90 65.55 278.98 367.65 329.36 76.49 247.14 24.59 85.34 44.23 46 E16a_E17a KnownJunction 1 43.27 123.27 44.94 70.55 150.42 187.62 328.00 116.20 50.26 136.92 374.31 382.17 290.73 378.66 61.19 250.70 290.32 246.07 73.32 215.40 11.00 82.11 42.85 47 ER17a ExonRegion 0 47.66 146.59 46.55 73.67 136.50 202.27 335.25 118.94 48.84 172.29 424.41 348.02 238.38 368.57 89.83 249.59 331.75 208.45 56.16 234.78 15.51 91.11 40.14 48 E17a_E18a KnownJunction 0 55.79 184.57 70.19 90.70 268.08 269.56 389.87 106.63 52.29 181.29 465.17 370.47 305.50 345.64 134.25 247.88 457.04 148.73 83.39 227.74 16.93 130.92 38.41 49 ER18a ExonRegion 0 42.23 203.85 61.23 85.55 135.95 152.35 268.89 129.87 57.80 195.40 460.81 397.01 249.35 370.67 103.82 260.23 412.61 204.78 63.04 270.68 27.28 90.65 44.08 50 E18a_E19a KnownJunction 0 51.12 386.58 58.40 76.75 142.95 181.83 389.25 110.86 45.72 153.92 270.70 416.99 272.22 350.52 149.08 277.53 277.61 159.97 52.14 253.43 28.42 45.01 51.82 51 ER19a ExonRegion 0 58.06 280.13 62.28 86.51 148.82 157.84 311.85 122.10 59.13 160.70 335.59 444.98 278.20 350.26 120.75 242.93 330.80 152.78 61.55 269.66 17.14 76.00 33.74 52 E19a_E20a KnownJunction 0 55.34 344.48 40.06 87.27 258.66 142.59 316.34 85.80 50.72 101.48 265.12 519.32 263.29 342.75 118.55 306.42 253.48 161.83 50.07 171.30 12.23 64.54 52.84 53 ER20a ExonRegion 0 84.93 370.19 52.84 84.20 219.65 152.11 373.99 113.94 50.63 138.34 359.05 481.40 340.41 376.12 138.85 241.77 288.25 145.54 86.57 180.05 20.45 95.70 33.56 54 E20a_E21a KnownJunction 0 85.57 326.98 47.99 75.71 236.84 132.71 390.84 103.22 53.36 121.79 365.88 440.84 293.32 378.60 145.74 271.38 263.86 198.48 108.90 183.38 29.22 89.22 40.55 55 E21_Aa NovelBoundary 0 21.49 34.01 11.89 28.90 11.46 2.16 16.96 32.78 12.44 16.14 0.00 18.31 41.39 5.06 5.69 4.36 13.28 36.35 0.00 15.53 0.00 2.69 0.00 56 ER21a ExonRegion 0 82.98 292.73 68.23 92.81 170.30 176.83 352.62 124.48 53.03 161.23 400.66 404.86 265.09 350.56 136.36 259.18 321.18 170.30 68.04 199.96 21.84 100.46 38.36 57 E21_Da NovelBoundary 0 21.34 16.71 10.67 18.11 36.93 0.00 35.15 36.31 10.24 9.37 9.32 19.36 0.00 9.48 6.06 4.36 30.57 30.10 0.00 19.05 0.00 0.00 8.71 58 E21a_E22a KnownJunction 0 124.02 276.92 74.18 120.10 255.18 280.24 478.68 98.21 63.71 167.62 447.59 344.66 256.96 344.81 134.37 314.96 283.78 219.83 44.33 241.42 8.77 95.52 44.30 59 ER22a ExonRegion 0 75.97 212.56 72.34 113.78 206.20 215.08 344.10 148.61 72.44 199.24 410.70 505.41 305.61 317.83 158.95 237.40 350.84 151.79 76.99 224.53 9.12 112.86 26.69 60 E22a_E23a KnownJunction 0 77.57 283.63 75.57 108.51 173.43 167.91 302.91 183.03 60.73 255.43 513.87 460.05 238.62 246.16 156.75 185.76 509.02 119.63 50.73 242.12 27.61 57.01 27.15 61 ER23a ExonRegion 0 121.00 249.04 77.67 137.93 204.34 216.57 428.04 183.75 67.26 232.30 404.59 496.90 259.67 319.45 151.76 231.85 384.81 188.26 80.88 227.57 24.78 86.10 48.23 62 E23a_E24a KnownJunction 0 291.09 435.65 110.40 176.57 386.67 435.09 789.23 250.51 78.36 293.33 630.95 729.54 406.47 541.47 389.39 476.46 671.06 231.81 152.00 330.32 35.34 227.48 56.00 63 ER24a ExonRegion 0 121.57 238.99 88.92 127.75 259.32 252.73 440.97 154.47 68.47 200.16 407.68 441.85 242.12 389.24 198.84 278.88 379.21 297.27 95.52 223.99 35.21 77.15 51.86 64 E24a_E25a KnownJunction 0 100.39 301.66 89.83 137.18 207.47 180.75 267.67 145.94 73.41 199.45 333.08 347.06 122.88 358.94 147.35 277.70 323.23 303.36 45.74 227.35 28.48 57.74 42.00 65 ER25a ExonRegion 0 142.08 315.52 127.33 163.47 261.21 256.95 412.56 172.56 74.60 217.49 402.32 387.53 211.87 337.53 196.60 237.18 351.10 231.63 75.85 233.16 17.87 86.84 37.61 66 E25a_E26a KnownJunction 0 187.66 326.13 179.80 203.24 255.52 317.32 495.64 203.73 74.51 261.45 532.98 523.97 216.06 387.49 280.36 375.88 452.83 215.31 68.33 288.52 37.25 121.18 43.11 67 ER26a ExonRegion 0 159.88 372.93 140.30 159.54 274.94 268.32 419.36 196.37 72.36 234.58 388.84 487.58 202.06 362.43 238.40 270.84 323.39 295.85 82.72 216.85 25.97 102.85 42.52 68 E26a_E27a KnownJunction 0 202.26 342.77 120.55 126.09 365.70 315.95 608.30 170.70 62.79 171.06 343.98 449.25 235.37 297.61 196.06 178.50 299.20 139.95 57.70 175.96 30.64 99.26 38.93 69 ER27a ExonRegion 0 189.65 390.10 156.23 158.37 299.70 276.32 510.29 202.54 68.02 211.66 382.43 450.43 183.57 333.66 272.70 238.83 296.57 150.20 65.29 226.72 14.61 103.27 40.11 70 E27a_E28a KnownJunction 0 265.45 430.84 140.33 139.01 371.39 279.10 572.35 208.45 57.96 201.57 320.77 396.73 205.02 245.75 209.90 126.21 215.61 106.58 33.22 233.75 0.00 99.93 18.61 71 ER28a ExonRegion 0 96.77 197.19 99.18 115.48 208.37 144.28 271.22 150.87 44.87 162.38 132.82 230.32 110.80 132.85 121.19 82.39 85.81 51.89 26.67 102.82 5.85 69.04 13.73 72 IG16_AR3 ActiveIntergenicRegion 0 0.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 1.62 0.00 0.99 0.00 6.31 0.00 0.00 7.71 1.74 2.94 73 IG16_SR1 SilentIntergenicRegion 0 1.20 1.15 0.00 0.00 0.18 14.22 0.32 0.00 2.26 5.30 5.80 0.00 0.00 7.67 2.16 10.17 6.27 6.78 2.65 5.22 13.32 1.18 2.35 74 IG16_AR1 ActiveIntergenicRegion 0 1.81 2.90 0.52 0.58 2.96 14.56 6.41 0.00 3.26 8.59 8.25 0.00 0.00 14.30 2.30 6.69 8.98 8.47 4.54 9.79 25.30 0.59 4.68