Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP6V1C1 Gene 0 72.59 71.33 52.77 95.85 131.25 206.40 91.75 124.27 161.52 101.50 75.23 118.60 83.72 72.95 60.05 66.04 65.52 39.03 47.28 72.24 64.37 195.48 139.48 2 395862 Transcript 0 31.51 34.33 30.01 49.38 56.63 117.35 38.86 74.60 137.00 91.23 103.55 43.42 47.77 84.71 65.34 139.01 101.36 60.91 56.04 87.79 146.43 137.72 232.20 3 285415 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG17_AR1 ActiveIntergenicRegion 0 3.66 3.64 0.94 4.12 5.11 5.22 3.49 8.37 1.17 5.44 1.28 0.00 19.06 2.28 3.54 3.94 5.49 6.50 9.68 3.87 5.58 0.89 1.64 5 IG17_AR2 ActiveIntergenicRegion 0 4.47 20.34 10.80 46.11 18.99 27.60 8.44 26.68 34.09 16.76 4.04 1.25 12.95 4.40 3.06 2.09 12.00 11.59 23.98 5.44 12.31 3.64 3.49 6 IG17_SR3 SilentIntergenicRegion 0 6.60 8.19 2.31 14.98 14.17 12.21 7.44 7.86 14.24 9.36 10.25 4.83 17.04 5.10 4.17 9.82 22.59 4.86 9.00 2.62 2.07 2.17 14.27 7 IG17_AR3 ActiveIntergenicRegion 0 15.32 19.58 7.79 44.35 39.68 36.84 11.81 28.13 34.43 23.02 23.04 8.10 13.43 9.62 8.57 17.71 35.47 10.91 18.61 3.62 2.65 4.20 15.99 8 ER1a ExonRegion 0 50.02 58.13 16.07 23.81 70.14 207.20 67.81 45.61 96.90 62.82 69.43 21.69 24.77 66.45 60.31 138.56 86.29 55.45 47.21 71.06 118.29 107.23 219.93 9 E1a_E2a KnownJunction 0 6.52 11.38 15.85 13.85 16.04 39.98 14.18 33.15 89.61 65.11 58.23 5.25 39.77 32.67 14.71 21.45 49.46 4.23 10.73 33.81 110.33 20.45 23.82 10 ER2a ExonRegion 1 3.07 9.35 25.79 32.44 15.52 36.03 8.41 61.06 148.34 103.79 217.84 34.85 41.16 77.59 26.11 42.20 217.03 25.55 17.92 107.66 329.79 49.59 55.72 11 E2_Ab KnownBoundary 1 3.78 5.46 28.27 38.42 13.16 29.76 12.06 71.30 173.87 114.14 334.77 55.22 41.56 149.27 35.60 62.89 365.31 14.84 29.84 189.19 462.40 73.42 81.18 12 ER2b ExonRegion 1 8.47 9.53 43.00 74.62 17.06 49.57 21.51 123.48 238.57 170.96 265.23 89.70 39.43 218.75 95.56 257.46 269.95 128.65 90.48 211.44 335.79 278.48 387.55 13 E2_Da KnownBoundary 1 26.82 12.89 39.89 76.75 36.59 78.25 29.72 124.17 204.77 152.90 145.09 68.87 61.03 275.12 214.85 526.61 141.94 172.45 201.51 225.95 177.80 497.40 857.05 14 E2a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2c ExonRegion 1 26.48 23.59 39.68 79.99 54.24 115.50 21.09 110.75 201.55 138.27 132.00 88.64 86.21 201.80 187.90 452.84 113.73 182.02 161.41 170.41 121.44 352.15 750.34 16 E2_Ac KnownBoundary 1 29.49 20.85 35.72 71.19 129.54 182.45 33.12 63.09 129.69 85.37 133.56 106.08 140.74 79.23 96.30 205.25 84.53 106.83 91.48 112.69 78.95 148.55 337.36 17 ER2d ExonRegion 0 15.39 31.06 32.14 52.81 154.95 400.94 96.44 68.35 137.24 78.69 109.21 114.83 103.82 108.30 72.47 130.10 74.80 68.20 49.59 98.40 95.86 143.81 145.30 18 E2b_E3a KnownJunction 0 18.37 40.26 38.11 54.67 156.37 603.46 179.96 60.95 143.75 70.65 99.66 99.03 84.90 119.20 63.91 104.67 73.68 25.29 21.46 91.91 101.13 129.88 88.78 19 ER3a ExonRegion 0 37.41 92.26 32.80 43.21 119.42 411.15 165.16 70.84 141.24 80.96 124.73 84.36 113.66 124.96 73.21 67.35 112.28 34.56 18.78 77.75 110.15 143.98 105.33 20 E3a_E4a KnownJunction 0 35.86 143.72 39.59 49.84 77.50 168.71 93.27 91.72 154.66 89.53 148.56 93.48 100.97 117.55 93.95 60.84 121.55 36.77 29.37 110.26 76.79 145.00 87.07 21 I3 Intron 0 10.71 5.34 3.48 10.59 8.02 8.68 11.68 5.62 7.40 5.07 3.98 14.23 18.92 3.98 5.02 10.58 9.90 4.59 4.67 6.41 6.98 10.54 12.01 22 I3_AR2 ActiveIntronRegion 0 27.29 13.73 3.88 15.86 13.36 9.90 19.45 4.53 11.30 9.24 6.36 28.78 32.47 5.37 7.83 13.48 10.34 8.17 5.58 7.77 4.76 21.02 15.63 23 I3_SR3 SilentIntronRegion 0 8.09 4.99 5.00 13.80 7.95 11.42 9.81 8.14 7.82 6.29 5.02 11.46 22.24 4.31 4.96 14.45 14.17 6.63 5.86 7.23 12.57 11.31 19.26 24 ER4a ExonRegion 0 67.19 77.09 40.74 60.03 75.11 156.79 71.37 90.99 161.47 101.18 183.58 171.06 116.98 141.75 73.34 75.58 136.99 27.82 63.56 102.70 84.18 204.09 127.81 25 E4a_E5a KnownJunction 0 92.31 74.07 48.49 82.51 87.61 189.55 42.84 93.85 178.47 85.90 159.88 116.29 161.68 183.59 83.94 106.13 131.74 21.60 66.92 97.35 93.41 237.10 154.42 26 ER5a ExonRegion 0 94.08 57.15 49.25 73.60 95.90 226.97 70.99 109.55 172.49 102.65 170.87 221.17 170.67 145.66 100.11 99.86 129.26 43.53 40.34 97.49 69.54 231.29 155.86 27 E5a_E6a KnownJunction 0 91.87 60.38 56.30 97.19 172.07 271.78 109.39 136.53 195.31 132.40 209.00 339.26 266.22 131.44 159.59 73.23 138.48 35.07 43.30 124.70 68.14 272.31 149.30 28 ER6a ExonRegion 0 69.82 49.20 49.71 103.88 173.20 239.79 116.59 106.26 177.43 120.94 202.47 291.16 232.26 154.40 106.87 98.56 171.22 43.96 64.09 111.47 79.57 306.96 198.86 29 E6a_E7a KnownJunction 0 43.79 48.68 72.23 113.81 187.86 233.10 163.76 112.26 177.57 126.17 192.00 301.75 272.55 144.51 128.56 103.48 149.04 43.44 59.77 108.15 88.28 310.15 207.01 30 ER7a ExonRegion 0 56.10 61.58 63.03 113.53 138.33 207.11 112.42 122.35 196.82 124.94 205.79 359.13 217.59 160.31 128.18 107.72 145.14 42.35 60.88 118.55 103.44 301.48 210.52 31 E7a_E8a KnownJunction 0 88.76 73.08 71.55 111.01 134.38 241.85 128.65 136.20 218.75 140.38 236.85 382.92 220.60 184.00 188.89 108.69 169.14 46.10 54.21 119.27 114.60 354.73 219.64 32 ER8a ExonRegion 0 87.76 76.36 58.34 105.42 116.38 268.93 112.61 134.84 213.75 133.06 203.09 310.47 211.26 174.98 140.44 135.90 179.01 47.18 54.01 135.86 129.28 284.36 247.02 33 E8a_E9a KnownJunction 0 80.61 95.11 53.40 120.26 152.89 271.38 105.99 136.24 215.77 129.93 216.58 352.16 215.73 178.88 138.08 149.96 163.81 33.29 54.12 150.84 114.78 326.01 219.38 34 I8_AR1 ActiveIntronRegion 0 13.83 11.61 7.62 10.86 11.45 9.80 10.40 7.80 17.66 13.21 2.73 4.43 23.09 0.61 2.90 8.29 6.71 6.63 5.13 1.06 7.35 8.33 11.65 35 I8_AR2 ActiveIntronRegion 0 6.59 8.10 3.57 6.60 8.00 7.93 8.26 9.74 10.14 9.60 5.11 8.66 25.44 4.70 5.53 9.20 2.62 3.14 4.21 4.72 13.45 13.81 11.85 36 ER9a ExonRegion 0 106.51 68.68 62.52 104.65 178.33 310.58 140.13 134.04 215.47 132.62 188.72 351.48 206.66 158.80 116.46 135.79 144.32 45.72 74.02 117.02 102.96 287.21 224.61 37 E9a_E10a KnownJunction 0 161.95 77.09 57.66 99.95 216.47 345.48 217.63 150.21 191.29 134.31 157.62 298.00 226.28 174.23 168.98 143.21 159.14 34.57 111.81 103.80 87.48 299.80 233.04 38 ER10a ExonRegion 0 133.25 78.64 72.77 100.58 180.70 337.50 189.41 148.61 231.52 160.90 191.97 303.62 239.74 153.13 155.80 132.42 147.28 42.64 78.14 118.02 90.80 292.20 223.47 39 E10a_E11a KnownJunction 0 150.25 79.99 80.22 125.59 182.26 363.94 133.81 174.28 254.25 176.67 174.47 295.75 178.07 201.01 121.02 169.87 136.61 35.11 62.68 123.74 125.78 295.70 283.06 40 I10 Intron 0 6.89 10.66 2.60 10.95 9.32 10.57 10.46 8.39 9.44 6.53 2.90 16.09 20.19 5.58 4.39 3.67 4.94 1.10 1.79 4.62 1.65 17.55 5.17 41 I10_SR1 SilentIntronRegion 0 6.49 10.52 3.79 9.74 8.89 10.06 10.20 9.60 10.22 5.77 3.70 18.89 24.27 6.70 4.10 3.49 5.20 1.62 2.37 4.28 2.08 18.87 6.39 42 ER11a ExonRegion 0 126.80 80.55 86.76 105.04 130.65 267.12 136.67 137.71 221.78 185.41 183.51 311.24 200.38 160.22 137.28 156.07 149.85 37.50 85.35 96.57 87.83 320.16 246.74 43 E11a_E12a KnownJunction 0 120.61 111.69 80.19 110.01 131.24 233.39 83.51 141.50 198.58 167.40 137.03 243.53 182.29 111.37 129.55 119.11 139.78 48.79 88.47 70.24 124.23 242.48 176.10 44 I11 Intron 0 10.76 7.40 5.48 9.74 18.39 16.20 14.15 8.93 11.69 5.92 4.91 17.08 18.68 13.52 8.66 9.44 7.82 2.66 4.42 6.39 2.29 22.14 15.10 45 I11_SR1 SilentIntronRegion 0 10.82 7.44 5.51 9.78 18.50 16.30 14.22 8.97 11.76 5.95 4.94 17.17 18.78 13.59 8.71 9.50 7.86 2.67 4.44 6.42 2.29 22.27 15.18 46 E12_Aa NovelBoundary 0 31.78 27.69 1.30 14.28 45.93 10.16 17.75 11.46 12.12 8.73 4.74 12.60 27.60 6.71 13.72 19.14 8.51 4.68 3.76 5.37 9.08 18.25 12.46 47 ER12a ExonRegion 0 123.26 114.54 92.63 132.67 209.70 330.70 152.36 143.79 249.06 181.77 185.50 304.60 210.90 157.45 165.23 157.41 164.16 47.18 82.32 109.63 95.33 382.47 252.83 48 E12a_E13a KnownJunction 0 121.43 146.42 126.10 174.74 315.53 416.41 234.06 197.61 245.48 216.02 180.15 274.59 169.63 164.52 146.61 218.06 124.73 76.52 94.40 114.92 123.80 402.00 400.87 49 I12_SR3 SilentIntronRegion 0 17.14 9.97 3.17 5.69 3.15 6.72 9.68 8.10 4.82 4.57 0.95 19.36 16.92 0.10 0.00 3.96 2.59 0.00 0.00 1.67 0.00 24.96 1.27 50 I12_AR5 ActiveIntronRegion 1 12.01 16.98 3.80 5.43 13.35 8.57 11.55 14.54 6.31 4.72 0.63 20.08 18.76 2.35 0.00 5.05 4.66 0.00 0.00 1.65 1.40 23.93 14.17 51 E13_Aa NovelBoundary 1 21.71 3.29 3.87 18.18 27.16 10.85 13.07 18.65 8.16 11.71 2.32 11.70 46.10 4.65 20.64 8.29 4.21 0.00 0.00 3.20 5.50 21.68 10.76 52 ER13a ExonRegion 0 72.10 86.95 54.36 113.64 158.37 216.60 105.41 157.46 181.85 130.28 81.37 185.25 127.55 84.95 74.39 63.35 56.36 26.77 39.53 84.17 42.32 261.81 123.04 53 E13_Da KnownBoundary 1 43.93 113.60 35.21 49.41 175.38 223.00 91.99 90.81 150.64 87.11 31.59 66.47 89.77 20.37 25.47 36.23 36.93 8.33 30.68 63.92 14.70 187.07 74.86 54 ER13b ExonRegion 0 71.46 69.20 52.64 96.80 127.19 188.06 82.84 122.46 148.59 86.17 40.24 66.68 46.96 45.04 37.67 39.99 40.26 37.31 42.92 56.01 52.31 159.19 111.17