Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UTP23 Gene 0 58.13 108.71 46.57 100.24 78.74 68.91 65.97 46.18 35.20 74.92 47.09 149.50 106.21 71.45 58.33 55.19 55.35 34.39 35.65 68.38 29.25 99.68 45.90 2 309822 Transcript 0 72.97 118.61 54.54 106.83 107.86 97.82 83.69 36.97 28.88 79.23 74.55 135.49 140.02 88.79 79.21 54.06 82.52 26.04 32.19 83.72 49.46 92.87 40.89 3 357148 Transcript 0 0.00 6.93 0.00 4.54 6.28 18.77 2.25 4.94 2.13 3.87 0.00 2.42 0.00 1.56 0.68 0.00 0.00 1.80 0.00 4.20 0.75 1.38 2.76 4 ER1a ExonRegion 1 29.03 57.92 16.04 27.42 24.99 72.48 35.23 22.79 21.95 41.72 48.70 11.88 6.13 44.59 46.62 96.06 56.69 70.66 25.89 64.90 52.07 43.42 73.65 5 E1_Da NovelBoundary 0 7.41 0.00 1.77 0.00 0.00 0.00 2.21 0.00 6.31 2.93 0.00 0.00 0.00 12.07 8.90 19.57 0.00 17.91 0.00 27.36 2.84 2.39 7.43 6 E1a_E2a KnownJunction 1 29.04 19.34 28.89 69.02 35.23 22.37 12.63 41.32 38.48 55.34 39.17 33.46 6.98 70.75 74.05 179.53 65.45 131.49 56.94 98.88 47.63 59.89 118.65 7 E1a_E4a NovelJunction 0 0.00 3.29 0.00 0.00 12.82 18.57 0.00 2.55 6.22 4.70 0.00 0.00 0.00 0.00 4.45 0.00 0.00 10.03 0.00 8.05 0.00 2.88 0.00 8 I1_AR2 ActiveIntronRegion 0 8.78 9.36 1.77 6.01 16.95 4.52 13.94 5.48 4.29 4.41 1.85 29.93 27.18 13.19 8.80 6.84 0.57 0.68 0.79 5.24 0.71 5.22 0.76 9 E2_Aa NovelBoundary 0 41.86 15.79 5.94 25.94 30.90 19.76 12.90 11.58 6.34 11.04 9.27 12.60 13.64 6.53 10.75 11.54 22.63 2.07 4.80 15.60 0.00 8.70 3.93 10 ER2a ExonRegion 0 92.64 128.08 37.95 84.60 94.54 132.26 112.69 37.42 37.87 71.38 99.96 115.93 66.06 94.06 70.84 70.69 97.52 58.64 30.22 87.08 57.20 80.05 61.52 11 E2_Da NovelBoundary 0 6.59 23.35 8.54 17.95 36.84 8.69 24.16 11.21 7.70 16.87 10.27 33.76 13.64 0.00 4.45 8.12 4.77 4.64 0.00 12.78 0.00 0.00 4.35 12 E2a_E3a KnownJunction 0 85.72 122.81 58.22 103.85 131.49 129.70 99.76 24.23 20.75 78.81 103.92 103.98 160.22 103.36 98.40 56.14 110.80 21.47 26.73 98.37 72.59 77.71 38.16 13 E2a_E4a KnownJunction 0 0.00 0.00 0.00 3.63 0.00 2.90 0.00 5.54 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 4.35 14 I2 Intron 0 12.81 18.01 8.64 22.46 13.54 19.77 13.12 14.03 5.97 12.51 6.59 13.52 11.32 5.22 3.66 5.56 5.63 4.66 4.03 8.90 1.33 6.08 3.55 15 I2_AR1 ActiveIntronRegion 0 8.14 13.99 4.94 11.91 11.66 19.29 9.38 5.44 3.90 8.60 4.07 9.34 6.32 4.01 2.23 4.75 3.98 5.44 4.54 5.92 2.11 2.38 3.15 16 I2_SR1 SilentIntronRegion 0 15.35 20.23 10.64 28.15 14.61 20.13 15.15 18.65 7.10 14.64 7.97 15.80 14.03 5.89 4.44 6.02 6.53 4.27 3.78 10.52 0.93 8.06 3.79 17 E3_Aa NovelBoundary 0 15.04 15.19 3.93 23.81 54.92 37.59 44.56 9.04 2.34 10.23 2.68 24.76 47.56 5.24 6.18 0.00 9.44 2.20 0.00 23.20 0.00 6.06 0.00 18 ER3a ExonRegion 0 60.21 114.41 50.85 109.80 84.23 65.95 67.62 49.72 37.02 79.64 45.18 167.00 119.81 74.22 60.03 51.97 54.23 30.60 37.64 69.07 26.34 108.03 43.61 19 E3_Da NovelBoundary 0 48.30 87.35 47.84 88.47 32.34 50.60 61.65 29.61 25.06 50.63 22.85 62.57 53.41 21.90 0.00 33.24 4.21 11.36 20.80 22.50 2.41 43.54 29.54 20 I3_AR1 ActiveIntronRegion 0 1.97 7.39 2.16 19.22 7.82 18.29 6.79 10.21 6.52 13.27 0.63 1.83 3.77 1.37 1.64 0.98 1.09 6.80 4.72 6.31 1.81 0.11 0.90 21 E4_Aa NovelBoundary 0 3.11 11.18 7.27 25.94 11.04 11.47 8.92 17.50 14.03 23.58 0.00 6.30 0.00 0.00 0.00 4.19 8.79 4.39 13.55 9.52 0.00 0.00 0.00 22 ER4a ExonRegion 0 0.00 13.86 0.00 5.45 12.56 34.65 4.50 4.33 1.71 7.74 0.00 4.85 0.00 3.12 1.35 0.00 0.00 1.03 0.00 8.40 1.50 2.75 1.17 23 IG29_AR1 ActiveIntergenicRegion 0 5.40 21.32 2.33 31.07 10.23 39.75 7.88 27.00 24.77 26.88 1.37 2.53 1.09 0.76 3.07 1.26 0.47 6.51 3.61 5.12 0.00 5.31 2.50 24 IG29_AR3 ActiveIntergenicRegion 0 1.83 15.85 1.81 25.14 15.90 70.60 8.85 23.59 17.31 23.27 0.96 1.32 0.96 0.70 2.47 1.47 1.63 4.89 1.97 7.64 1.64 1.29 2.18 25 IG29_AR6 ActiveIntergenicRegion 0 9.51 15.95 7.02 28.83 16.62 30.59 8.14 20.41 14.61 20.98 2.32 0.00 0.00 1.59 2.30 1.43 0.00 6.78 3.07 7.51 1.06 1.50 3.53