Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EBAG9 Gene 0 89.99 62.40 69.75 106.85 116.17 95.82 70.23 63.51 54.79 85.29 92.66 127.33 149.23 103.86 136.71 65.01 87.29 26.95 38.58 52.03 15.88 51.00 27.16 2 395785 Transcript 0 0.00 0.00 0.00 0.00 2.23 0.00 0.33 0.00 0.00 0.00 0.32 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 3 276658 Transcript 0 10.81 5.95 1.53 4.71 5.33 7.21 7.69 2.17 1.81 3.89 2.61 2.01 5.93 4.16 3.75 3.96 1.69 2.59 0.79 3.11 1.08 1.53 0.36 4 337573 Transcript 0 10.56 23.09 20.06 18.31 48.85 89.04 31.37 17.28 20.71 30.65 39.80 29.11 41.31 47.51 32.46 36.97 66.24 16.81 27.60 22.85 6.97 19.14 11.03 5 IG11_SR1 SilentIntergenicRegion 0 28.96 0.62 0.00 0.35 3.22 1.11 4.48 1.95 2.10 0.97 33.47 46.13 92.15 40.37 56.54 9.08 16.90 0.00 0.00 0.00 0.00 0.32 0.00 6 IG11_AR1 ActiveIntergenicRegion 0 24.17 0.00 0.00 2.04 0.28 0.00 2.75 1.73 1.17 2.29 22.79 75.54 137.99 29.96 36.19 3.91 15.81 0.00 0.00 0.00 0.00 0.00 0.00 7 IG11_AR2 ActiveIntergenicRegion 0 14.58 0.25 0.00 1.01 3.15 0.22 2.99 0.46 1.04 0.68 23.91 70.89 142.83 18.37 34.58 6.78 8.17 0.00 0.00 0.00 0.00 0.25 0.00 8 IG11_SR2 SilentIntergenicRegion 0 5.42 0.00 0.00 0.00 1.50 0.64 2.70 0.00 0.25 0.10 11.51 26.62 70.20 17.24 8.70 2.08 3.21 0.16 0.00 0.12 0.00 0.00 0.00 9 IG11_AR3 ActiveIntergenicRegion 0 7.34 0.00 0.00 0.57 3.18 0.86 1.93 0.24 0.17 0.48 18.60 19.81 39.04 15.01 12.13 2.79 4.43 0.00 0.00 0.00 0.00 0.00 0.00 10 IG11_SR3 SilentIntergenicRegion 0 4.36 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 4.32 15.79 19.86 0.67 6.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 IG11_AR4 ActiveIntergenicRegion 0 18.52 0.00 0.00 0.15 6.09 0.95 4.28 0.19 0.75 0.25 16.75 38.94 100.07 14.11 26.09 1.33 5.75 0.00 0.00 0.29 0.00 0.00 0.00 12 IG11_SR4 SilentIntergenicRegion 0 31.31 0.00 1.37 0.38 8.81 1.04 3.05 1.45 0.88 0.64 18.42 41.81 39.51 14.18 23.96 2.80 9.07 0.00 0.00 0.08 0.00 0.00 0.00 13 IG11_AR5 ActiveIntergenicRegion 0 15.81 0.00 0.42 0.47 5.29 0.75 2.39 1.05 0.21 0.40 10.00 28.69 42.48 9.51 28.10 1.21 1.92 0.00 0.19 0.25 0.00 0.00 0.00 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 2.23 0.00 0.33 0.00 0.00 0.00 0.32 0.00 0.00 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 15 ER1b ExonRegion 0 4.34 3.59 2.88 2.47 7.90 23.80 10.41 0.85 0.96 1.14 3.46 0.10 0.95 12.24 5.83 11.22 11.74 4.43 6.26 3.33 3.45 5.05 7.79 16 E1a_E3a KnownJunction 0 17.93 9.14 6.56 11.65 7.13 112.04 25.00 3.70 6.22 4.97 14.16 0.00 13.15 22.43 9.52 33.92 38.43 8.50 9.41 14.06 8.15 13.29 14.94 17 ER2a ExonRegion 0 13.57 12.58 16.28 15.08 12.12 26.79 12.66 10.53 14.11 23.21 31.00 11.41 16.22 36.34 34.51 28.30 51.59 15.96 11.91 18.53 7.65 9.32 9.67 18 E2a_E3a KnownJunction 0 7.56 33.61 23.83 21.54 85.57 151.28 50.08 24.03 27.31 38.09 48.59 46.82 66.39 58.69 30.41 45.63 80.88 17.66 43.30 27.16 6.30 28.96 12.38 19 I2_AR1 ActiveIntronRegion 0 1.27 1.61 1.80 4.59 1.90 0.53 0.69 6.97 4.74 4.83 3.71 14.76 5.96 5.42 9.81 14.06 10.33 1.40 4.24 1.96 0.00 1.88 4.02 20 ER3a ExonRegion 0 38.18 39.86 38.37 57.03 75.96 114.29 67.01 47.27 57.76 68.58 76.59 73.60 103.23 126.95 108.47 66.75 105.63 23.34 43.20 55.15 16.30 35.57 34.01 21 E3a_E4a KnownJunction 0 102.31 55.78 59.22 63.43 106.54 101.19 92.08 65.47 62.88 88.78 141.35 146.90 171.25 205.49 234.25 104.25 116.88 39.96 85.56 71.08 11.00 40.48 53.86 22 ER4a ExonRegion 0 154.99 66.26 60.43 65.33 95.45 80.01 64.57 76.07 88.71 101.03 164.49 135.42 167.83 177.07 170.95 104.70 175.45 47.76 71.53 73.01 39.95 53.64 49.92 23 E4a_E5a KnownJunction 0 163.21 69.79 77.38 95.73 165.20 132.65 77.68 76.97 109.37 100.57 152.46 142.55 108.76 184.65 125.60 85.11 186.63 55.96 87.25 92.36 33.85 59.40 63.34 24 ER5a ExonRegion 0 138.48 72.01 110.14 117.66 175.45 176.06 108.91 94.15 97.33 131.45 195.67 169.01 271.37 194.44 225.24 111.74 176.09 48.09 73.82 98.27 34.61 79.63 51.36 25 E5a_E6a KnownJunction 0 164.99 74.59 119.95 138.11 285.14 155.25 144.24 91.27 95.22 139.01 184.84 220.57 415.88 241.86 265.53 69.90 167.46 42.57 80.28 108.47 24.09 67.54 59.58 26 ER6a ExonRegion 0 178.39 126.21 141.84 166.31 193.05 150.44 135.63 107.02 108.21 145.61 193.86 246.22 342.63 250.26 266.06 143.57 192.06 57.96 77.54 111.19 33.32 93.33 60.99 27 E6a_E7a KnownJunction 0 134.17 146.75 150.35 167.05 218.93 208.86 192.59 102.73 89.78 132.99 170.62 284.04 305.66 201.54 298.66 117.66 146.61 48.87 71.63 116.27 25.39 87.14 38.16 28 ER7a ExonRegion 0 140.79 115.69 111.56 163.52 302.65 219.68 161.88 76.84 71.72 139.56 180.71 187.06 328.25 186.93 222.04 111.94 166.87 64.93 73.75 88.95 46.45 76.68 60.33 29 E7a_E8a KnownJunction 0 0.00 0.00 0.00 1.63 0.00 0.00 5.39 0.00 0.00 2.82 0.00 0.00 6.82 0.00 0.00 0.00 0.00 4.27 0.00 0.00 0.00 0.00 0.00 30 E7a_E9a KnownJunction 0 206.26 130.44 126.84 201.67 409.59 303.29 159.21 109.30 75.72 166.68 180.89 161.15 362.31 223.15 346.62 136.29 204.67 76.77 76.14 99.58 48.62 108.57 64.62 31 I7 Intron 0 15.91 26.82 5.36 24.77 22.84 19.17 17.37 16.73 12.33 17.31 8.13 22.87 24.32 7.64 7.91 8.14 5.59 4.06 5.79 9.85 1.92 6.32 2.49 32 I7_SR1 SilentIntronRegion 0 8.88 22.63 2.71 17.82 16.57 14.49 15.50 13.04 9.98 14.83 7.11 22.91 22.57 6.62 5.68 6.42 3.73 3.27 5.45 8.17 1.70 5.17 2.18 33 I7_AR1 ActiveIntronRegion 0 23.28 42.66 6.72 42.77 55.29 41.89 25.49 28.26 17.07 23.77 8.80 24.65 36.85 9.60 12.03 12.71 10.02 4.31 7.59 13.33 0.76 11.06 4.04 34 I7_AR2 ActiveIntronRegion 0 36.25 29.23 20.98 58.60 42.14 33.01 23.33 46.67 24.24 31.83 13.05 25.44 40.45 9.74 21.76 19.69 9.90 9.47 6.37 6.91 2.48 14.58 5.87 35 I7_SR2 SilentIntronRegion 0 30.89 38.75 22.76 70.01 39.10 30.60 23.10 39.95 23.79 30.80 12.85 29.66 52.81 11.79 15.69 17.67 9.05 12.15 6.49 14.34 4.65 6.67 2.66 36 I7_AR3 ActiveIntronRegion 0 65.73 50.06 25.51 59.03 33.10 41.73 28.99 38.35 29.70 39.40 17.12 33.03 19.50 11.55 19.19 18.98 21.88 12.72 3.59 25.77 0.00 15.39 3.61 37 I7_AR4 ActiveIntronRegion 0 73.65 50.43 19.48 48.11 40.40 50.06 18.01 25.06 22.60 30.28 20.49 16.45 16.42 10.07 18.57 16.94 24.43 6.65 3.19 16.60 0.66 12.50 5.87 38 I7_AR5 ActiveIntronRegion 0 73.02 43.21 18.38 46.85 38.13 48.37 17.05 14.48 24.39 25.52 18.36 16.78 14.07 11.57 15.96 9.29 19.39 5.54 3.19 18.88 2.20 13.28 5.51 39 I7_SR3 SilentIntronRegion 0 54.06 34.12 15.73 39.37 30.24 16.41 18.27 18.08 17.27 15.87 10.84 9.52 14.35 13.59 18.34 9.99 8.78 4.07 8.63 14.83 7.60 5.35 2.26 40 E8_Aa NovelBoundary 0 35.93 47.36 19.37 59.13 53.23 24.42 25.48 28.34 16.98 24.85 9.05 43.36 38.80 16.25 19.53 21.79 35.25 11.15 3.67 15.98 0.00 5.33 0.00 41 ER8a ExonRegion 0 32.43 17.85 4.58 12.50 15.98 21.64 17.68 6.50 5.44 8.85 7.83 6.04 10.97 12.48 11.25 11.87 5.06 3.51 2.36 9.32 3.23 4.59 1.08 42 E8_Da NovelBoundary 0 63.64 33.42 15.05 51.41 38.62 46.79 60.33 26.29 13.54 12.71 17.48 6.30 6.82 7.42 14.71 11.54 12.72 11.11 12.33 5.75 2.72 11.27 12.89 43 E8a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 I8 Intron 0 30.24 24.58 13.45 35.93 35.87 22.17 17.31 15.85 7.28 14.84 6.16 15.67 17.59 6.33 13.43 4.57 6.53 4.76 4.20 7.47 0.97 3.21 1.61 45 I8_SR1 SilentIntronRegion 0 31.33 25.51 11.75 36.26 32.28 18.00 14.69 13.67 7.70 12.09 6.84 18.37 12.21 5.70 14.28 4.78 7.43 6.08 4.10 8.20 1.42 3.02 0.94 46 I8_AR1 ActiveIntronRegion 0 28.29 22.87 17.33 35.72 44.23 31.60 23.28 20.82 6.47 21.04 4.76 9.94 29.60 7.80 11.77 4.18 4.64 1.94 4.48 5.99 0.00 3.66 3.10 47 E9_Aa NovelBoundary 0 35.19 23.94 20.14 23.57 47.28 7.89 19.52 17.21 5.84 9.75 2.53 5.70 0.00 2.41 9.15 0.00 0.00 3.61 4.61 2.75 0.00 0.00 0.00 48 E9_Ab NovelBoundary 0 48.16 23.61 10.59 31.10 23.77 13.69 29.28 19.18 5.53 5.35 7.58 13.95 12.66 2.12 9.39 7.35 4.49 8.12 0.00 2.88 2.78 0.00 0.00 49 ER9a ExonRegion 0 170.59 118.35 116.17 213.43 326.98 238.76 130.28 118.23 76.58 168.37 172.03 195.69 426.79 215.68 275.04 128.40 181.55 76.50 71.35 97.02 48.92 102.09 60.49 50 ER9b ExonRegion 0 204.66 134.72 179.62 337.77 261.83 224.06 154.04 153.52 112.56 189.47 223.92 359.01 439.29 247.66 385.17 183.50 208.24 65.20 113.74 125.29 38.66 125.10 61.95 51 E9_Da KnownBoundary 0 174.55 149.32 209.78 379.04 250.00 196.14 169.05 176.33 124.51 237.86 305.18 379.77 385.53 200.19 309.04 145.86 223.28 76.81 93.37 145.48 45.78 98.77 43.88 52 ER9c ExonRegion 0 123.90 92.58 98.06 171.22 166.57 106.73 89.64 98.57 72.06 121.78 92.33 196.56 172.19 96.50 169.91 57.88 63.55 20.73 34.23 54.74 7.93 73.48 22.86