Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYC Gene 0 119.22 9.63 80.05 27.88 107.22 8.18 19.73 198.22 154.97 40.23 855.34 496.23 530.62 612.85 593.30 471.63 475.73 10.22 3.69 3.26 390.80 319.23 119.43 2 259523 Transcript 0 2.15 0.08 0.14 0.16 2.48 0.07 0.01 0.72 1.11 0.14 20.06 6.00 2.68 9.13 7.71 7.44 9.41 0.01 0.00 0.58 5.31 3.46 2.67 3 377970 Transcript 0 204.80 15.48 136.24 55.87 130.92 7.67 33.12 312.12 229.40 52.56 1248.55 564.23 710.78 924.28 830.33 600.37 694.60 16.25 1.90 3.08 607.78 386.41 158.29 4 454617 Transcript 0 0.00 0.00 9.59 4.06 0.00 0.00 0.00 38.94 31.96 6.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 1.04 0.17 0.29 0.32 1.65 0.14 0.01 1.45 2.22 0.27 30.81 6.00 5.36 4.61 5.66 3.17 6.20 0.01 0.00 1.17 4.63 1.48 1.49 6 E1_Ab KnownBoundary 0 3.78 0.00 0.00 0.00 4.16 0.00 0.00 4.56 3.18 0.00 21.37 5.85 6.66 2.47 10.51 3.25 3.46 0.00 4.05 0.00 13.84 0.00 8.28 7 ER1b ExonRegion 1 36.68 5.30 42.49 10.44 31.56 6.21 8.31 92.36 87.98 23.79 698.10 169.38 267.90 432.89 354.41 396.75 384.34 10.30 4.04 1.20 332.13 205.33 124.49 8 E1a_E2a KnownJunction 0 85.13 12.70 130.30 34.93 46.69 12.83 23.23 278.28 241.23 60.65 1520.28 406.18 561.33 1037.26 854.94 811.58 761.85 21.56 4.80 0.00 583.36 482.15 247.98 9 E2_Ab NovelBoundary 1 160.10 0.00 91.22 28.57 51.87 5.79 10.07 223.89 221.18 57.19 1416.46 351.41 751.90 743.78 570.49 544.81 716.69 11.36 0.00 2.62 604.55 324.90 117.12 10 ER2a ExonRegion 0 88.76 7.63 108.14 27.51 48.33 6.07 15.39 242.74 219.16 63.44 1691.29 452.43 780.89 1071.61 791.14 766.99 820.27 18.48 5.57 1.86 691.00 435.59 193.63 11 ER2b ExonRegion 0 68.48 4.97 66.51 15.94 47.76 9.02 11.89 190.51 175.97 48.65 1163.67 466.90 763.49 857.08 592.88 563.31 670.07 12.12 3.19 1.52 620.98 297.08 147.29 12 E2_Da KnownBoundary 1 19.48 3.35 45.77 10.42 45.50 4.71 4.02 139.69 97.63 21.22 430.42 54.62 149.83 128.73 164.04 111.08 276.95 5.06 0.00 0.00 259.40 114.75 44.90 13 E2a_E2c KnownJunction 0 0.00 0.00 19.19 8.12 0.00 0.00 0.00 77.88 63.92 12.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 14 E2_Ac KnownBoundary 0 20.97 0.00 20.31 0.00 11.12 2.38 4.42 74.63 49.25 11.42 486.12 129.94 154.21 243.81 256.26 170.55 276.39 6.72 0.00 0.00 290.85 129.14 67.86 15 ER2c ExonRegion 0 50.44 2.03 64.33 17.49 43.26 6.42 12.58 207.41 161.59 34.60 935.85 323.99 454.15 641.53 543.50 310.09 540.80 11.09 0.00 0.00 581.78 239.95 100.82 16 ER2d ExonRegion 0 70.90 5.64 89.30 18.40 46.96 8.11 14.70 216.49 193.57 45.39 1122.00 470.29 686.50 837.84 662.14 478.88 650.03 10.53 0.00 0.80 683.43 291.74 144.56 17 E2_Db KnownBoundary 0 69.27 6.51 90.21 21.41 71.65 10.96 17.05 191.12 162.18 46.55 894.65 313.90 507.92 564.25 383.96 460.14 522.49 6.01 4.71 0.00 515.96 218.54 138.37 18 E2b_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2_Ad KnownBoundary 0 117.58 9.80 49.47 8.59 66.38 2.90 11.04 152.80 139.26 32.77 1007.26 391.93 761.15 668.61 768.90 525.67 594.76 17.66 0.00 5.88 544.07 307.94 165.86 20 ER2e ExonRegion 0 93.28 10.17 95.75 16.35 62.31 8.51 13.43 210.50 194.27 55.46 1344.88 550.46 1022.43 1019.71 872.86 670.21 811.78 15.31 0.00 2.13 779.01 390.06 198.43 21 ER2f ExonRegion 0 83.87 3.71 96.30 28.73 68.84 7.93 14.17 212.13 183.59 57.37 1076.60 444.12 742.80 1026.47 795.00 690.85 729.09 18.22 5.76 2.07 650.76 346.60 169.68 22 E2d_E3a KnownJunction 1 160.92 12.63 131.75 51.84 63.16 5.45 33.30 286.49 215.39 45.80 1256.16 315.70 640.22 958.21 755.55 570.36 715.57 21.68 0.00 0.00 700.43 309.47 158.69 23 E2d_E3b KnownJunction 0 3.26 0.00 0.00 0.00 3.31 0.00 0.00 0.00 0.00 0.00 9.32 6.00 0.00 13.66 9.77 11.71 12.62 0.00 0.00 0.00 5.99 5.45 3.84 24 ER2g ExonRegion 0 184.14 12.20 132.34 54.52 64.22 3.67 21.18 271.37 200.09 47.02 1258.32 333.37 651.91 982.59 713.71 558.76 755.91 14.78 0.00 4.26 669.93 268.77 161.52 25 E3_Ab NovelBoundary 0 90.39 0.00 0.00 1.93 33.02 2.67 8.66 6.61 15.45 3.76 20.58 0.00 0.00 12.01 13.60 11.36 12.90 0.00 0.00 0.00 2.47 7.78 0.00 26 ER3a ExonRegion 0 186.96 11.52 127.44 56.33 63.33 3.67 22.51 271.94 206.68 47.02 1270.56 368.00 670.67 996.13 721.44 554.80 732.80 14.78 0.00 2.84 668.46 267.38 157.60 27 ER3b ExonRegion 0 311.56 12.97 155.53 59.85 84.07 16.27 39.17 344.53 278.12 70.06 1526.33 965.14 958.01 1323.49 1156.35 1030.42 889.86 27.25 5.52 12.04 769.23 551.63 218.06 28 E3_Da KnownBoundary 0 180.92 18.75 215.99 71.29 115.70 16.64 48.05 458.39 345.74 89.56 1616.36 671.92 887.60 1335.16 1284.26 953.60 986.53 47.67 11.95 2.49 816.26 721.51 231.33 29 ER3c ExonRegion 0 266.53 22.28 149.52 59.42 266.26 13.90 43.54 377.93 266.13 64.84 1218.93 1008.98 821.45 818.51 1013.99 675.96 635.44 12.29 5.69 6.41 454.45 582.36 158.57 30 IG2_SR1 SilentIntergenicRegion 0 1.68 1.58 0.62 0.92 6.38 0.00 0.15 30.09 14.19 1.35 1.52 2.72 0.88 2.20 1.57 0.34 1.87 0.31 0.72 0.00 2.00 1.42 3.00 31 IG2_AR1 ActiveIntergenicRegion 0 2.07 0.69 0.26 0.46 9.97 0.34 0.37 18.77 12.91 0.53 0.92 0.00 0.55 0.70 2.01 0.00 0.47 0.00 0.00 0.00 0.62 0.29 1.66 32 IG2_AR2 ActiveIntergenicRegion 0 0.14 4.97 7.92 14.16 1.63 2.79 6.54 8.12 3.93 2.03 7.08 2.20 8.85 9.78 10.02 3.99 19.69 10.80 7.72 23.28 19.64 3.56 7.56 33 IG2_SR3 SilentIntergenicRegion 0 2.13 4.25 10.62 15.75 3.47 2.22 17.06 7.63 8.10 3.02 2.58 7.67 8.17 2.88 10.64 19.34 15.98 14.59 14.04 12.10 5.18 0.73 12.09 34 IG2_AR3 ActiveIntergenicRegion 0 46.95 12.84 8.84 25.80 13.39 4.52 36.12 15.22 21.22 8.90 64.08 32.48 42.60 76.63 84.75 217.55 113.51 32.62 16.54 27.71 11.91 3.62 11.60