Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LRRC69 Gene 0 10.09 0.48 1.44 1.36 4.53 3.11 4.43 1.83 1.45 0.67 9.29 8.59 9.93 8.72 4.65 5.03 4.68 0.40 1.13 0.59 1.91 1.23 1.73 2 343709 Transcript 0 13.78 0.00 1.09 1.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 448384 Transcript 0 4.26 0.15 0.39 0.94 5.22 3.24 3.16 1.61 0.68 0.45 7.76 6.22 9.66 6.64 4.69 6.35 3.36 0.21 0.14 0.59 0.76 0.65 2.05 4 ER1a ExonRegion 0 14.30 0.92 1.20 4.39 6.04 4.63 11.19 4.65 3.74 1.82 16.04 22.01 21.48 19.12 6.89 11.73 13.74 1.24 4.31 1.89 2.49 2.35 1.74 5 E1_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 5.92 1.64 1.79 1.07 2.63 6.30 0.00 12.18 4.45 12.39 9.35 0.00 0.00 0.00 2.47 3.00 0.00 6 E1a_E2a KnownJunction 0 3.04 0.00 0.00 1.70 0.00 0.00 7.73 0.00 0.00 1.40 9.48 0.00 20.45 4.71 0.00 4.36 4.77 0.00 0.00 0.00 0.00 0.00 4.27 7 E1a_E6a KnownJunction 0 13.78 0.00 1.09 1.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 8.32 0.00 0.00 2.18 1.79 0.00 2.16 0.00 15.10 12.13 0.00 3.85 4.58 0.00 0.00 2.94 0.00 2.51 0.00 9 ER2a ExonRegion 0 4.92 0.00 0.00 1.88 4.30 3.54 7.16 4.14 1.48 0.88 15.49 13.12 26.48 14.74 5.89 8.07 8.60 1.85 1.28 0.28 0.88 1.67 2.80 10 E2_Da NovelBoundary 0 7.56 0.00 0.00 6.06 13.92 0.00 1.90 1.52 1.79 1.32 11.58 6.30 20.45 7.42 5.07 7.26 15.52 0.00 0.00 0.00 0.00 5.57 0.00 11 E2a_E3a KnownJunction 0 7.56 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 4.58 0.00 0.00 2.77 0.00 7.69 0.00 0.00 0.00 2.88 0.00 0.00 0.00 12 I2 Intron 0 4.19 0.45 0.76 2.94 6.49 2.91 6.23 3.08 2.21 1.57 10.61 21.07 26.46 7.91 3.64 6.54 5.70 0.56 1.15 1.24 1.47 1.51 1.31 13 I2_SR1 SilentIntronRegion 0 2.08 0.45 0.41 2.81 5.11 2.13 5.33 3.22 1.56 1.45 5.79 24.31 35.06 6.03 3.17 4.21 4.13 0.66 0.85 1.14 0.49 1.38 0.39 14 I2_AR1 ActiveIntronRegion 0 4.32 0.48 1.25 2.75 7.83 4.40 5.82 2.42 2.80 1.95 17.36 11.93 8.57 11.36 4.20 11.92 7.02 0.64 0.75 0.68 3.87 1.62 3.46 15 I2_SR2 SilentIntronRegion 0 13.47 0.41 1.53 3.87 10.43 3.88 11.02 3.62 4.09 1.47 20.74 22.26 18.65 10.44 4.80 7.78 10.53 0.00 3.21 2.69 1.77 1.92 1.73 16 E3_Aa NovelBoundary 0 28.45 0.00 6.30 3.73 12.05 11.07 15.24 15.44 9.64 2.58 27.59 20.26 47.24 10.30 10.88 15.38 16.18 0.00 0.00 3.26 0.00 2.69 0.00 17 ER3a ExonRegion 0 10.09 0.00 0.00 2.74 6.89 1.66 1.92 0.00 0.24 0.00 13.24 21.77 18.89 13.13 9.46 4.48 7.05 0.00 0.00 1.08 0.00 1.46 6.28 18 E3_Da NovelBoundary 0 63.79 0.00 5.50 5.26 8.15 0.00 19.12 5.91 1.71 2.10 21.85 23.71 41.23 7.42 10.38 11.36 8.04 0.00 0.00 2.75 2.59 8.39 4.27 19 E3a_E4a KnownJunction 0 3.41 0.00 0.00 0.00 7.81 13.63 0.00 0.00 1.16 0.00 4.79 6.30 0.00 0.00 10.75 7.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I3 Intron 0 8.87 1.15 2.03 3.73 6.51 3.37 6.88 2.87 2.11 2.04 9.65 7.62 15.82 5.95 6.95 6.06 6.89 0.48 1.10 1.47 1.49 1.44 1.20 21 I3_AR1 ActiveIntronRegion 0 24.10 1.65 4.03 5.19 9.64 5.33 8.92 5.69 2.57 3.38 13.25 6.24 22.85 8.68 12.39 13.47 11.89 0.53 2.59 3.21 1.28 1.45 2.39 22 I3_SR1 SilentIntronRegion 0 10.20 1.73 2.65 4.54 8.35 3.64 8.89 3.09 2.15 2.26 11.70 9.88 16.25 7.42 8.89 6.09 7.70 0.64 1.50 1.61 2.15 1.64 1.57 23 ER4a ExonRegion 0 6.00 0.05 1.07 0.54 10.61 10.36 7.92 3.23 3.26 1.78 16.85 11.75 11.08 16.05 9.92 9.22 5.15 0.00 0.00 1.11 2.00 2.71 3.01 24 E4_Da NovelBoundary 0 0.00 0.00 1.54 4.13 7.22 19.59 0.00 3.98 1.56 5.26 7.05 12.60 6.82 7.95 13.35 4.02 13.37 0.00 0.00 0.00 5.56 3.00 0.00 25 E4a_E5a KnownJunction 0 2.96 0.00 1.48 0.00 3.99 0.00 0.00 4.97 0.00 0.00 0.00 0.00 5.84 2.47 4.45 12.82 0.00 0.00 0.00 0.00 3.15 0.00 0.00 26 I4 Intron 0 2.06 0.21 1.68 1.45 6.02 7.97 3.86 2.76 2.82 2.10 9.10 6.12 9.29 7.73 3.12 6.69 5.07 0.14 0.49 1.74 1.13 1.07 1.95 27 I4_AR1 ActiveIntronRegion 0 2.05 0.00 2.81 2.00 6.16 8.29 4.28 3.60 3.57 2.22 11.79 5.14 10.64 7.79 2.07 8.93 4.39 0.15 0.94 1.22 1.34 1.28 2.24 28 I4_SR2 SilentIntronRegion 0 1.98 0.82 0.00 1.21 8.77 13.96 6.55 3.79 2.15 1.68 9.36 2.51 3.05 9.37 2.62 8.09 6.68 0.62 0.71 3.01 0.75 1.69 2.49 29 E5_Aa NovelBoundary 0 6.82 0.00 0.00 0.00 7.64 14.99 8.30 12.86 3.47 0.00 5.05 26.56 0.00 9.54 4.45 3.67 9.44 0.00 0.00 0.00 0.00 2.51 0.00 30 ER5a ExonRegion 0 0.38 1.30 0.97 0.00 13.42 0.00 3.71 2.16 0.00 0.00 5.42 3.07 4.23 5.91 1.73 3.51 4.68 0.00 0.00 0.00 0.80 0.00 2.08 31 E5_Da NovelBoundary 0 10.15 0.00 1.83 5.09 21.99 5.79 0.00 9.24 8.22 0.00 2.42 0.00 0.00 0.00 0.00 8.46 0.00 0.00 0.00 3.26 0.00 3.12 0.00 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 10.04 0.82 0.07 0.79 0.16 0.92 0.69 0.00 0.00 0.00 3.11 0.00 0.00 1.18 2.93 2.71 0.00 0.00 0.00 0.00 2.23 0.00 0.00 34 E6a_E7a KnownJunction 0 20.97 2.70 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 4.95 0.00 0.00 2.30 9.27 3.42 0.00 0.00 0.00 0.00 5.25 0.00 0.00 35 ER7a ExonRegion 0 11.43 0.69 2.46 0.22 0.67 0.00 1.50 0.00 0.25 0.00 5.91 2.02 1.09 0.59 2.13 0.84 0.00 0.00 0.00 0.00 1.78 0.59 0.39 36 E7a_E8a KnownJunction 0 7.41 0.00 8.87 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 2.41 6.30 3.42 0.00 0.00 0.00 0.00 2.59 0.00 4.35 37 ER8a ExonRegion 0 13.11 0.33 2.70 0.32 0.86 0.88 0.00 0.00 0.45 0.00 1.24 0.00 1.85 1.06 0.86 0.08 0.00 0.00 1.02 0.00 2.51 0.33 0.72