Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYBL1 Gene 0 20.94 18.74 15.97 22.08 33.65 40.92 45.50 23.69 13.38 36.28 4.99 59.77 2.37 51.12 6.29 22.17 1.24 17.66 4.57 23.66 2.32 10.06 6.75 2 402282 Transcript 0 2.99 5.54 2.01 2.73 3.90 4.74 11.80 4.38 4.49 12.37 0.81 3.35 0.00 44.50 1.64 9.46 0.00 22.48 1.33 18.10 6.01 0.82 9.49 3 399555 Transcript 0 21.93 6.05 6.53 9.26 11.80 26.23 34.23 16.31 5.82 35.40 10.21 31.66 0.00 26.66 0.00 26.15 0.00 25.41 0.00 17.07 5.68 8.14 4.35 4 331406 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 2.43 1.80 1.12 2.17 4.23 4.72 8.73 1.73 2.88 5.29 1.62 0.39 0.00 26.49 3.28 10.72 0.00 15.15 2.66 8.96 2.69 1.64 3.61 6 E1a_E3b KnownJunction 0 3.56 9.27 2.90 3.30 3.57 4.77 14.88 7.02 6.11 19.45 0.00 6.30 0.00 62.51 0.00 8.20 0.00 29.80 0.00 27.23 9.33 0.00 15.37 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 0 1.27 2.85 0.49 0.82 0.54 1.10 2.91 1.04 1.24 2.75 1.16 0.87 0.00 9.74 0.58 2.38 0.00 5.54 0.00 4.26 1.76 0.42 2.94 9 ER3b ExonRegion 0 14.78 9.35 4.27 11.11 9.33 11.61 16.15 7.67 9.14 25.79 5.87 19.92 2.14 73.64 6.38 21.00 0.50 29.35 6.58 27.94 4.53 5.60 13.70 10 E3a_E4a KnownJunction 0 6.08 9.47 3.37 7.66 11.46 13.63 9.85 4.44 6.34 21.73 5.16 24.61 0.00 67.40 6.30 20.42 4.39 38.51 4.14 38.93 2.66 8.21 12.12 11 ER4a ExonRegion 0 9.49 5.85 2.48 6.21 15.09 19.10 23.43 5.57 3.35 33.47 3.68 38.78 5.41 62.87 3.14 17.63 3.39 33.03 5.53 29.08 1.19 7.96 9.30 12 E4a_E5a KnownJunction 0 18.37 12.76 6.45 7.82 8.49 19.59 25.48 4.89 3.10 40.67 2.37 75.92 0.00 50.97 4.45 26.66 4.02 27.03 9.41 30.04 0.00 11.33 16.90 13 ER5a ExonRegion 0 3.98 9.45 4.57 6.11 15.85 16.60 34.42 10.41 6.97 29.57 5.55 75.84 3.03 68.30 5.12 26.53 4.05 18.89 7.12 28.76 1.21 13.60 9.03 14 E5a_E6a KnownJunction 0 6.45 15.72 6.39 9.52 16.55 38.67 51.85 12.49 4.63 29.74 4.58 69.47 6.82 69.10 0.00 19.40 0.00 14.43 0.00 32.79 0.00 5.33 3.84 15 ER6a ExonRegion 0 6.83 10.39 5.36 11.88 10.98 23.39 41.23 12.48 7.33 27.84 10.02 82.42 3.08 72.25 8.61 40.17 4.00 23.79 7.51 35.72 3.75 10.32 4.60 16 E6a_E7a KnownJunction 0 0.00 6.25 5.32 15.58 11.54 26.12 31.53 10.31 5.41 30.92 14.16 110.14 0.00 61.57 13.97 46.48 4.11 21.02 0.00 37.97 5.56 6.25 4.35 17 ER7a ExonRegion 0 10.75 9.04 8.91 15.44 17.31 29.39 44.12 8.55 12.62 22.39 8.62 85.06 1.13 57.55 5.54 34.92 4.07 21.88 8.39 35.37 4.05 14.18 6.75 18 E7_Da NovelBoundary 0 6.89 5.53 3.08 0.00 11.63 0.00 27.78 2.55 3.21 6.90 2.63 18.91 0.00 31.02 0.00 12.05 0.00 1.95 0.00 6.20 0.00 0.00 0.00 19 E7a_E8a KnownJunction 0 3.70 12.04 2.87 6.73 15.53 29.98 42.40 11.05 4.34 13.57 4.47 65.12 0.00 23.60 13.35 16.32 8.13 16.08 0.00 8.50 2.90 8.27 7.26 20 I7 Intron 0 2.90 2.11 1.43 2.16 5.76 3.95 10.63 4.24 2.01 4.98 1.52 27.16 0.59 18.48 1.02 6.55 0.33 2.43 0.56 5.39 0.11 0.63 0.82 21 I7_SR1 SilentIntronRegion 0 1.11 1.53 0.27 2.27 5.59 5.23 10.32 3.54 1.57 5.48 1.45 31.73 2.32 18.16 0.00 5.74 1.02 1.58 0.48 5.11 0.00 0.31 0.81 22 I7_AR1 ActiveIntronRegion 0 2.97 2.52 2.50 3.38 6.64 2.51 12.87 6.35 2.44 4.86 1.39 31.77 0.00 21.19 1.64 8.36 0.42 2.67 0.62 5.97 0.00 0.27 0.60 23 I7_SR2 SilentIntronRegion 0 2.98 0.60 1.33 0.13 2.65 2.46 7.45 1.91 1.06 4.44 0.88 14.11 1.14 15.86 0.65 5.19 0.00 3.32 1.41 4.68 0.00 0.96 0.36 24 I7_AR2 ActiveIntronRegion 0 3.87 2.87 0.70 1.63 6.62 6.19 9.69 3.14 2.27 5.21 2.16 26.10 0.00 16.53 1.00 5.36 0.00 2.04 0.00 5.22 0.41 1.15 1.42 25 E8_Aa NovelBoundary 0 14.97 8.35 0.00 8.52 0.00 0.00 20.76 2.55 3.15 9.29 7.32 78.78 0.00 40.91 0.00 4.02 0.00 3.27 0.00 9.78 0.00 8.08 0.00 26 ER8a ExonRegion 0 18.03 14.78 6.16 11.10 9.63 24.18 42.79 9.08 10.74 21.59 9.10 64.02 1.88 46.62 6.11 22.19 3.39 15.82 10.24 32.51 2.70 11.00 12.49 27 E8a_E9a KnownJunction 0 7.11 25.65 4.46 10.02 16.13 40.09 27.25 6.08 13.31 18.72 12.00 125.44 6.82 55.68 23.36 32.30 0.00 13.85 17.60 54.14 3.15 14.94 19.72 28 ER9a ExonRegion 0 8.93 10.75 3.43 10.03 18.70 38.77 36.45 12.30 12.02 26.67 10.29 95.87 2.41 53.77 6.69 35.95 1.60 30.99 5.01 36.15 3.74 14.03 17.14 29 E9a_E10a KnownJunction 0 17.19 5.99 3.02 5.06 22.84 44.18 43.01 13.72 15.34 27.24 11.63 86.88 0.00 54.33 4.45 28.37 0.00 21.89 0.00 40.52 9.14 8.21 7.26 30 E10_Aa NovelBoundary 0 6.96 15.72 0.00 4.20 19.35 11.30 11.70 4.52 4.51 4.16 0.00 7.05 0.00 4.71 0.00 8.72 0.00 4.35 0.00 5.75 0.00 0.00 7.94 31 ER10a ExonRegion 0 15.03 20.52 11.46 10.46 19.89 30.35 43.55 12.96 13.24 31.05 8.03 85.18 4.21 71.61 3.61 50.18 1.44 45.97 2.08 30.79 6.38 10.19 14.70 32 E10_Da NovelBoundary 0 3.19 0.00 1.12 1.43 0.00 2.67 26.90 0.00 0.00 2.26 0.00 0.00 0.00 2.47 0.00 4.36 3.46 2.07 0.00 2.75 0.00 0.00 0.00 33 E10a_E11a KnownJunction 0 24.30 19.27 10.32 8.52 15.11 50.54 25.97 9.57 15.39 36.77 2.16 59.57 0.00 67.63 8.90 47.08 0.00 38.72 0.00 23.27 5.99 11.21 20.66 34 E11_Aa NovelBoundary 0 3.11 14.93 0.00 6.53 3.90 2.56 4.28 0.00 1.50 1.42 0.00 30.61 0.00 0.00 0.00 8.20 0.00 2.11 0.00 2.88 0.00 2.63 0.00 35 ER11a ExonRegion 0 21.44 27.14 10.62 15.32 27.22 38.82 46.41 14.89 16.57 35.36 8.55 64.58 2.14 86.60 3.98 41.67 3.58 43.79 5.98 36.56 7.54 13.11 20.12 36 E11_Da NovelBoundary 0 0.00 6.18 0.00 1.37 0.00 2.90 17.93 9.20 4.22 2.79 0.00 13.80 0.00 12.18 0.00 4.02 0.00 3.69 0.00 20.52 0.00 0.00 0.00 37 E11a_E12a KnownJunction 0 9.26 12.17 0.00 18.58 39.64 9.94 27.91 17.13 10.73 35.08 4.42 25.06 0.00 89.29 0.00 12.13 3.74 30.18 7.81 40.59 0.00 5.88 12.55 38 ER12a ExonRegion 0 21.03 19.74 2.12 15.12 35.27 36.68 41.39 15.87 14.04 34.59 4.41 54.41 2.82 71.03 5.28 18.96 3.74 30.62 5.72 31.99 2.08 15.27 11.21 39 E12a_E13a KnownJunction 0 23.04 27.10 1.63 18.11 32.26 62.18 39.70 13.76 11.14 33.36 4.95 55.67 0.00 71.69 10.75 19.48 0.00 10.90 4.42 23.91 3.15 14.27 0.00 40 ER13a ExonRegion 0 16.77 15.91 3.77 11.09 22.92 49.19 26.94 14.49 9.41 36.22 5.45 54.70 2.00 50.45 4.87 16.88 0.00 18.90 5.79 28.62 3.47 9.29 7.66 41 E13a_E14a KnownJunction 0 14.08 5.59 3.13 5.36 24.70 43.21 39.92 15.77 7.99 29.76 4.90 47.27 0.00 54.86 0.00 8.37 0.00 14.09 0.00 24.99 6.30 8.51 3.24 42 E14_Aa NovelBoundary 0 3.56 9.54 0.00 8.96 7.98 16.81 26.23 15.57 8.59 6.96 0.00 11.25 0.00 2.18 0.00 7.69 0.00 4.44 4.14 0.00 0.00 2.33 0.00 43 ER14a ExonRegion 0 14.35 8.76 4.35 15.40 37.09 42.90 54.11 19.62 13.40 28.96 8.81 57.47 3.85 59.83 3.10 27.13 1.44 27.27 5.55 23.75 3.45 11.40 10.24 44 E14a_E15a KnownJunction 0 5.48 3.16 6.06 18.31 6.96 41.34 37.14 20.33 12.04 31.86 2.05 62.87 6.98 76.17 4.57 48.79 0.00 20.52 4.24 38.29 2.41 15.06 4.35 45 ER15a ExonRegion 0 7.70 11.85 5.25 20.34 18.25 59.64 41.71 31.56 18.37 40.29 7.81 59.83 3.62 64.10 5.17 34.67 0.00 32.56 6.61 36.98 1.60 16.15 13.48 46 E15a_E16a KnownJunction 0 7.56 5.26 2.99 9.99 0.00 84.50 17.40 19.18 4.83 17.14 2.53 0.00 0.00 7.18 0.00 4.36 0.00 9.24 0.00 14.51 0.00 0.00 11.01 47 E15a_E17a KnownJunction 0 21.93 6.05 6.53 9.26 11.80 26.23 34.23 16.31 5.82 35.40 10.21 31.66 0.00 26.66 0.00 26.15 0.00 25.41 0.00 17.07 5.68 8.14 4.35 48 ER16a ExonRegion 0 4.94 8.38 6.47 12.95 29.06 46.21 30.05 24.42 13.36 16.29 2.41 34.20 0.00 27.28 0.05 9.56 0.02 1.84 2.71 14.92 0.00 8.45 6.79 49 E16a_E17a KnownJunction 0 0.00 9.93 5.44 8.39 26.32 15.90 20.80 22.39 8.28 24.52 4.95 74.27 0.00 13.77 0.00 3.25 0.00 1.95 0.00 9.14 0.00 5.63 0.00 50 ER17a ExonRegion 0 28.07 22.67 24.17 30.51 44.92 48.27 52.55 32.13 14.85 43.40 3.32 58.97 2.34 41.65 7.73 15.37 0.38 8.90 3.74 18.50 1.01 9.29 2.86 51 ER17b ExonRegion 0 3.70 4.58 5.21 0.00 0.00 0.92 1.32 0.86 0.62 1.43 1.93 0.00 0.00 0.81 2.18 0.00 0.00 0.00 0.00 0.53 0.00 0.00 0.00