Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCNE2 Gene 0 20.88 23.38 16.72 16.12 52.31 156.68 73.37 27.71 21.17 33.69 103.52 123.96 40.99 77.02 30.09 63.28 37.40 25.42 12.17 46.80 1.51 21.79 5.77 2 396133 Transcript 0 0.00 0.00 0.82 0.34 0.00 0.46 0.00 0.79 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 308108 Transcript 0 21.30 39.60 20.87 14.63 71.09 208.75 92.92 28.93 16.37 34.69 105.80 153.86 54.34 98.32 34.71 68.52 31.77 26.30 10.91 54.23 0.41 23.23 6.44 4 ER1a ExonRegion 0 4.05 6.69 0.69 0.63 7.69 30.74 15.31 1.34 0.90 2.65 17.86 0.81 0.00 15.17 3.05 25.08 9.41 16.19 0.84 8.64 2.98 2.03 2.35 5 E1a_E2a KnownJunction 1 38.30 51.96 0.00 1.66 61.04 245.48 92.26 1.81 1.79 0.00 105.92 5.85 12.66 120.90 23.12 177.56 72.09 36.69 7.44 52.48 0.00 18.80 11.95 6 ER2a ExonRegion 1 31.69 58.36 7.72 5.86 77.73 341.36 154.41 15.90 12.47 24.77 138.40 6.17 1.88 104.19 28.29 237.92 86.32 151.93 12.42 74.20 2.20 17.19 14.54 7 E2a_E3a KnownJunction 0 6.59 36.38 16.53 7.36 24.87 216.01 119.42 25.59 24.71 36.94 65.38 6.30 6.82 10.30 18.05 131.76 43.85 163.74 8.85 44.10 0.00 5.63 3.67 8 ER3a ExonRegion 1 1.40 10.06 9.30 3.60 14.54 82.16 25.16 11.76 14.13 18.41 73.51 36.24 10.06 30.62 5.05 37.04 39.99 48.92 8.18 26.45 1.27 3.42 3.81 9 E3a_E4a KnownJunction 1 0.00 9.21 12.15 4.89 0.00 33.90 10.51 22.18 21.50 24.98 153.41 36.46 0.00 58.98 4.45 18.20 69.85 12.02 0.00 52.28 0.00 0.00 4.35 10 ER4a ExonRegion 1 0.27 3.77 7.65 6.44 4.81 52.37 9.27 22.47 15.32 30.90 112.65 28.06 13.64 121.12 21.33 148.00 45.54 59.37 11.33 65.01 0.00 20.72 8.16 11 E4a_E5a KnownJunction 1 0.00 9.60 5.85 7.06 12.99 72.63 17.27 17.87 8.91 26.59 83.55 38.71 33.93 91.29 41.91 241.30 8.70 135.39 9.41 58.48 0.00 23.76 16.13 12 I4_SR1 SilentIntronRegion 0 0.75 0.23 0.00 0.12 0.24 7.95 1.85 0.00 0.44 0.00 6.10 0.10 0.00 5.92 1.48 17.11 6.46 7.97 0.00 4.07 1.18 0.00 0.33 13 I4_AR1 ActiveIntronRegion 0 1.41 0.59 0.36 1.00 2.64 13.55 6.57 2.31 0.89 1.19 10.63 2.20 3.08 7.76 1.26 15.08 3.38 9.18 0.00 5.79 0.34 0.42 1.73 14 ER5a ExonRegion 1 9.77 23.75 6.57 5.50 69.78 189.07 89.20 19.01 11.68 20.21 115.80 99.41 32.18 72.70 11.93 99.53 27.23 48.56 13.52 28.63 1.12 11.64 7.61 15 E5a_E6a KnownJunction 1 7.48 60.45 9.73 7.19 28.44 175.81 58.43 22.10 8.01 20.33 134.77 138.80 59.90 131.56 11.37 46.06 64.33 8.95 18.82 41.10 3.15 29.51 3.84 16 ER6a ExonRegion 1 19.27 30.86 8.55 6.88 27.31 115.92 50.48 20.80 18.64 23.01 154.42 135.87 50.04 85.34 10.30 65.58 37.67 18.76 11.55 39.56 2.07 20.16 2.53 17 E6_Da NovelBoundary 0 0.00 4.80 5.80 2.46 3.14 29.41 16.87 7.68 8.56 13.94 46.85 22.21 0.00 14.95 0.00 18.88 21.04 8.25 0.00 7.03 0.00 4.53 2.99 18 E6a_E7a KnownJunction 0 7.26 15.98 4.41 10.26 49.15 123.96 71.99 18.32 22.05 30.06 121.35 143.60 42.04 84.29 19.53 63.83 46.38 21.27 13.46 37.65 0.00 19.96 4.35 19 ER7a ExonRegion 0 11.43 19.75 7.99 9.11 44.07 137.19 63.02 21.72 27.00 26.42 138.59 156.89 52.55 106.88 22.46 67.69 55.58 18.96 11.66 51.66 3.37 25.46 2.26 20 E7a_E8a KnownJunction 0 22.89 27.89 9.70 2.06 20.12 152.41 79.23 24.23 30.35 24.18 135.88 139.55 73.37 94.77 22.75 65.37 63.02 32.83 25.04 43.02 5.62 24.43 3.59 21 ER8a ExonRegion 0 12.46 22.88 8.27 5.52 24.44 116.37 67.07 17.54 26.95 25.18 153.56 151.71 51.49 71.21 25.81 67.00 62.68 31.57 12.41 53.44 2.02 14.17 3.70 22 E8a_E9a KnownJunction 0 19.93 28.35 5.85 3.50 68.17 132.31 80.64 23.82 26.42 27.00 185.73 186.06 100.97 91.47 22.25 91.17 67.70 21.89 8.19 63.98 2.41 27.13 3.33 23 ER9a ExonRegion 0 18.70 21.72 8.97 4.60 41.21 172.64 77.03 18.90 20.74 27.02 178.51 195.69 84.98 96.38 33.20 62.81 61.37 29.11 6.56 66.62 1.53 21.31 5.68 24 E9_Da NovelBoundary 0 0.00 5.85 0.00 8.09 12.14 5.22 23.72 2.09 2.63 3.33 7.74 12.30 6.66 12.01 4.45 0.00 18.23 0.00 0.00 11.38 0.00 2.82 0.00 25 E9a_E10a KnownJunction 0 15.11 37.36 11.00 3.56 53.82 187.16 65.36 11.79 8.94 21.44 145.72 185.16 81.65 72.87 47.10 80.83 63.58 16.46 9.04 52.99 0.00 20.02 4.35 26 I9 Intron 0 9.57 11.06 4.86 16.28 20.18 40.69 20.70 13.29 10.30 8.89 8.90 18.21 11.65 12.18 6.41 10.15 6.03 4.57 6.07 9.63 0.61 6.61 3.96 27 I9_AR1 ActiveIntronRegion 0 11.04 13.07 5.39 16.69 21.01 42.13 23.93 14.93 11.64 10.17 9.57 20.19 12.83 12.47 6.73 10.33 5.57 4.22 6.04 9.75 0.70 7.68 3.40 28 I9_SR1 SilentIntronRegion 0 4.39 4.89 3.73 12.22 16.51 34.07 9.04 7.90 6.61 5.46 4.55 14.91 9.16 9.22 5.11 10.58 6.45 4.39 5.13 9.65 0.17 2.77 2.46 29 I9_AR2 ActiveIntronRegion 0 7.49 5.08 1.76 24.26 21.69 44.20 16.90 9.71 5.14 3.49 14.22 3.87 4.69 18.12 6.60 6.65 10.73 9.65 9.51 8.20 0.96 5.26 15.92 30 E10_Aa NovelBoundary 0 13.34 10.72 11.56 21.91 19.95 21.81 20.27 24.07 16.98 11.42 7.63 5.40 5.84 23.96 25.09 27.77 4.77 10.61 18.17 13.81 0.00 3.12 8.19 31 ER10a ExonRegion 0 33.94 30.59 15.71 20.16 51.48 167.73 82.38 20.79 15.33 28.94 166.59 214.70 72.74 120.94 36.71 87.47 61.33 38.52 9.16 72.04 5.02 27.14 8.68 32 E10_Da NovelBoundary 0 8.96 6.05 4.91 32.33 52.29 59.97 22.74 27.81 17.25 16.28 2.37 25.66 13.47 7.95 9.52 15.47 4.02 8.00 4.52 12.66 0.00 6.18 12.98 33 E10a_E11a KnownJunction 1 47.19 22.17 18.92 6.13 70.20 164.91 61.21 17.50 10.82 23.58 113.13 207.37 67.53 129.50 19.66 74.94 61.80 38.10 0.00 65.20 0.00 14.63 7.94 34 I10 Intron 0 9.20 7.12 5.61 18.30 18.45 35.78 18.95 14.20 9.37 8.70 8.40 16.85 14.95 8.90 6.41 3.78 3.85 4.11 2.70 11.51 0.70 3.31 1.87 35 I10_SR1 SilentIntronRegion 0 11.30 8.63 7.65 23.87 22.85 41.74 22.10 16.93 12.48 10.74 9.15 21.03 15.43 10.01 6.72 2.90 4.89 4.34 2.94 12.63 0.00 3.95 1.64 36 E11_Aa NovelBoundary 0 7.11 21.18 2.96 29.50 7.64 48.89 33.39 10.97 12.44 9.03 9.53 23.11 19.80 12.36 9.64 3.33 0.00 0.00 3.86 8.31 0.00 0.00 0.00 37 ER11a ExonRegion 0 28.18 36.68 27.49 27.93 62.37 215.42 105.04 28.68 21.92 39.92 152.26 166.63 56.10 121.57 37.40 100.68 56.37 38.15 24.90 70.27 3.56 26.93 11.64 38 E11_Da NovelBoundary 0 6.52 9.08 7.10 25.47 12.99 10.22 12.45 8.83 15.22 14.42 21.06 26.26 6.17 9.59 15.08 8.46 8.60 6.30 4.71 17.45 3.03 5.57 0.00 39 E11a_E12b KnownJunction 0 17.63 56.04 20.11 7.92 80.22 251.62 107.45 22.92 8.65 28.37 129.98 184.26 70.45 126.91 32.39 86.81 34.03 36.44 9.22 63.47 0.00 21.55 7.26 40 I11 Intron 0 7.84 14.77 5.69 16.26 16.66 32.62 16.29 7.26 10.64 11.15 8.31 13.38 1.55 9.19 5.19 7.49 5.38 2.45 7.56 10.41 0.00 4.63 2.61 41 I11_SR1 SilentIntronRegion 0 7.91 14.90 5.74 16.40 16.81 32.91 16.43 7.32 10.74 11.25 8.38 13.50 1.57 9.27 5.23 7.56 5.43 2.48 7.62 10.50 0.00 4.67 2.64 42 E12_Ab NovelBoundary 0 13.26 27.17 7.69 17.28 19.52 37.02 33.52 8.30 9.35 4.03 2.21 6.15 0.00 4.59 0.00 0.00 3.65 5.93 0.00 11.89 0.00 0.00 0.00 43 ER12a ExonRegion 0 0.00 0.00 0.82 0.34 0.00 0.46 0.00 0.79 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER12b ExonRegion 0 24.96 23.16 21.63 21.34 61.97 165.88 78.39 34.94 24.09 41.01 81.61 123.46 38.24 69.74 37.02 50.23 29.50 16.17 12.59 44.99 0.81 24.91 5.62