Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA1429 Gene 0 76.27 138.24 61.45 119.40 111.16 143.44 114.60 66.61 55.04 129.35 178.55 248.58 183.30 170.87 112.11 153.63 168.49 79.79 93.37 101.67 108.06 111.01 88.21 2 421249 Transcript 0 24.17 43.76 21.81 18.85 32.80 17.07 20.20 16.11 14.34 15.64 39.55 55.44 37.50 28.05 35.89 15.94 24.66 7.29 11.21 19.58 1.89 37.04 3.72 3 442835 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 437199 Transcript 0 2.89 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 297591 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 IG42_AR6 ActiveIntergenicRegion 0 3.54 6.50 12.00 25.42 14.84 14.64 4.73 5.89 12.91 15.17 2.09 1.44 1.22 1.93 5.76 6.63 4.45 1.49 9.86 8.67 1.68 1.94 0.61 7 IG42_AR5 ActiveIntergenicRegion 0 11.56 7.49 8.69 23.83 18.30 18.21 5.71 5.82 7.36 11.05 4.01 5.19 3.51 3.80 4.58 4.81 4.74 1.14 6.15 2.39 1.25 1.46 0.83 8 IG42_AR4 ActiveIntergenicRegion 0 22.86 24.15 15.92 29.94 30.27 49.91 5.21 10.37 12.08 23.64 6.79 4.60 4.84 5.79 3.23 7.24 9.73 3.00 7.27 6.38 3.47 1.09 6.58 9 IG42_SR3 SilentIntergenicRegion 0 31.78 9.27 17.56 34.60 23.47 34.29 20.84 9.14 15.05 22.30 9.28 7.61 3.55 6.50 10.07 8.75 17.97 0.32 4.14 6.29 3.27 1.61 1.93 10 IG42_AR3 ActiveIntergenicRegion 0 16.51 10.51 14.92 31.42 27.23 28.93 9.03 8.81 16.63 19.73 5.41 9.48 8.21 6.74 7.75 8.61 8.19 2.62 8.95 11.95 2.34 0.81 2.62 11 IG42_AR2 ActiveIntergenicRegion 0 17.54 12.96 9.98 17.56 20.43 31.82 12.69 3.79 6.02 7.63 9.27 0.84 1.29 6.62 12.14 4.59 8.23 3.54 18.00 11.62 1.67 1.16 3.22 12 ER1a ExonRegion 1 10.75 16.11 9.85 15.66 17.50 39.91 31.20 43.96 24.43 54.61 28.03 9.34 10.68 62.83 15.16 86.93 79.18 7.05 12.62 54.68 11.40 32.38 45.94 13 E1a_E2a KnownJunction 0 6.22 5.39 12.80 25.84 3.82 27.37 12.06 58.04 33.88 65.03 14.16 20.71 6.66 12.42 5.44 35.29 28.42 12.56 7.81 26.40 21.99 17.02 22.71 14 ER2a ExonRegion 1 12.52 11.80 7.63 22.22 15.59 20.39 9.82 27.33 20.04 56.30 145.10 68.38 56.28 50.29 21.08 42.69 137.02 27.81 32.81 53.63 86.48 35.58 24.51 15 E2a_E3a KnownJunction 0 0.00 20.72 16.91 33.83 0.00 13.51 13.78 68.59 43.00 98.13 239.43 111.64 99.67 119.25 39.56 134.92 225.43 73.95 106.17 118.95 97.48 104.71 110.29 16 ER3a ExonRegion 1 21.41 9.86 17.27 33.27 20.21 30.56 27.56 59.82 47.43 95.30 154.99 143.22 110.89 174.92 59.83 298.34 145.32 128.28 116.83 109.76 69.53 124.27 181.60 17 E3a_E4a KnownJunction 1 3.33 11.91 11.21 23.17 34.38 37.36 30.91 33.64 35.10 97.72 173.31 142.40 68.34 105.25 20.40 99.89 208.88 104.55 61.18 100.22 89.70 59.83 85.70 18 ER4a ExonRegion 1 5.62 11.25 9.35 19.39 59.25 60.55 55.71 30.83 32.16 78.04 210.09 130.41 67.57 114.45 16.82 90.74 168.14 92.54 67.09 72.38 86.57 73.09 67.96 19 E4a_E5a KnownJunction 1 2.89 10.00 11.27 15.65 50.08 105.90 99.45 33.68 29.48 52.19 184.26 206.17 109.73 137.21 24.48 71.43 151.57 96.96 87.72 86.42 123.49 116.04 74.18 20 E4a_E6a NovelJunction 0 0.00 6.05 3.34 3.96 4.33 0.00 1.81 0.00 0.00 0.00 0.00 0.00 6.66 7.95 0.00 16.06 9.16 2.57 0.00 0.00 3.15 0.00 4.10 21 ER5a ExonRegion 1 15.70 30.68 13.58 24.80 27.58 73.75 56.43 30.83 24.56 70.22 141.59 160.32 73.24 131.43 27.47 106.13 136.76 82.45 55.62 93.91 117.76 80.34 71.04 22 E5a_E6a KnownJunction 1 18.74 47.95 9.14 22.41 41.68 115.62 59.00 22.02 24.10 76.42 192.84 237.23 107.14 244.81 45.00 138.85 177.09 99.24 76.61 95.62 190.83 101.59 85.53 23 ER6a ExonRegion 1 27.65 35.12 17.06 35.41 31.37 69.46 53.59 20.90 22.46 68.33 159.93 194.16 94.75 193.44 33.90 129.59 156.67 103.98 75.02 114.95 148.54 74.92 80.60 24 E6_Da NovelBoundary 0 36.08 9.47 0.00 3.33 0.00 0.00 4.50 6.78 0.00 4.59 2.68 0.00 0.00 0.00 6.06 30.42 0.00 4.06 0.00 2.81 0.00 0.00 4.27 25 E6a_E7a KnownJunction 1 16.82 21.58 19.51 29.60 31.58 71.66 55.78 32.49 21.90 67.64 158.83 182.91 79.86 192.83 22.25 130.65 130.90 119.01 58.73 125.60 156.30 61.54 58.39 26 ER7a ExonRegion 1 27.67 26.48 33.66 45.15 32.74 85.63 69.01 34.86 41.03 70.41 176.00 263.30 175.13 196.57 52.49 113.82 193.75 78.03 57.08 122.04 106.34 83.75 66.27 27 E7a_E8a KnownJunction 1 10.59 52.36 31.10 50.24 10.95 81.83 61.61 39.68 45.77 85.50 262.80 312.40 240.89 154.98 26.45 103.39 224.68 56.29 55.72 137.87 74.13 129.94 57.71 28 ER8a ExonRegion 1 28.01 72.07 27.26 64.91 69.42 113.04 96.50 47.89 55.98 112.98 213.84 342.01 201.40 194.67 60.01 159.58 193.82 77.62 78.90 115.76 95.85 126.07 86.03 29 E8a_E9a KnownJunction 1 16.60 120.04 22.21 81.94 19.44 125.44 104.05 52.08 68.46 115.86 186.73 272.94 339.10 196.60 36.10 138.85 255.82 63.92 85.56 86.67 111.57 69.62 64.53 30 ER9a ExonRegion 0 35.05 94.31 30.87 70.16 89.07 135.31 114.75 49.72 56.53 117.27 222.68 330.20 216.79 214.04 80.42 189.59 227.16 71.90 120.74 108.38 129.81 124.69 114.95 31 E9a_E10a KnownJunction 0 45.34 145.17 22.89 82.14 137.69 137.93 164.33 55.74 59.09 125.45 198.47 423.29 321.57 153.98 63.29 238.91 228.70 63.63 83.30 105.40 71.85 137.04 113.02 32 ER10a ExonRegion 0 45.09 129.64 48.02 124.97 83.72 139.79 116.51 62.37 72.57 147.40 243.41 360.44 354.51 189.35 117.85 232.25 257.58 69.73 130.46 121.36 89.29 174.12 130.14 33 E10a_E11a KnownJunction 0 41.71 168.19 53.25 156.22 105.18 124.42 130.02 58.74 79.11 156.77 340.67 331.46 289.92 236.62 152.30 322.48 320.80 76.61 126.31 151.29 156.98 148.80 71.11 34 ER11a ExonRegion 0 52.25 200.44 55.94 122.94 102.87 194.52 176.98 63.81 82.98 161.24 273.38 321.22 260.38 246.71 118.43 234.08 303.80 93.01 118.05 123.02 140.40 158.40 120.47 35 E11a_E12a KnownJunction 0 114.61 232.66 45.06 111.84 158.40 274.67 171.40 56.07 84.52 159.69 267.75 342.11 428.54 213.85 168.37 296.59 283.03 104.21 146.36 188.56 170.57 135.02 127.11 36 ER12a ExonRegion 0 62.91 158.36 59.46 124.99 103.19 131.74 101.59 60.00 75.60 159.66 275.64 236.51 301.71 214.26 154.45 289.06 246.34 150.10 167.54 153.12 168.49 154.27 144.61 37 E12a_E13a KnownJunction 0 45.19 124.06 51.92 158.65 92.95 105.68 113.67 72.95 82.58 154.16 196.89 220.42 164.60 266.41 107.92 245.49 200.93 122.25 122.17 114.41 122.94 165.09 102.78 38 ER13a ExonRegion 0 78.48 272.18 61.08 148.67 125.10 135.44 124.64 81.52 58.63 143.34 208.80 291.48 258.57 229.68 118.17 196.40 192.27 103.71 118.29 115.98 133.76 133.77 104.40 39 E13_Da KnownBoundary 0 52.08 69.72 15.37 19.11 37.27 6.98 28.44 15.16 13.89 16.33 62.44 54.32 46.10 26.84 57.85 19.48 51.99 9.04 9.22 9.72 5.07 25.17 3.16 40 E13a_E14a KnownJunction 0 92.61 325.60 74.92 110.31 97.79 131.80 125.11 59.60 43.26 124.13 133.09 343.61 249.50 141.03 89.25 115.35 149.04 46.68 87.72 118.06 162.66 102.02 99.19 41 ER13b ExonRegion 0 24.17 43.76 21.81 18.85 32.80 17.07 20.20 16.11 14.34 15.64 39.55 55.44 37.50 28.05 35.89 15.94 24.66 7.29 11.21 19.58 1.89 37.04 3.72 42 E13_Db NovelBoundary 0 25.63 21.58 29.45 37.82 7.56 5.62 16.83 36.68 17.48 24.61 41.38 6.00 12.99 17.42 38.07 3.59 9.54 4.35 9.32 18.98 3.15 19.84 12.12 43 I13 Intron 0 30.44 33.32 7.02 13.24 17.45 9.20 12.62 8.18 7.08 9.43 25.21 32.45 29.66 13.74 26.23 14.92 7.73 1.38 11.19 7.83 0.74 24.39 3.93 44 I13_AR1 ActiveIntronRegion 0 37.06 40.40 8.64 16.09 21.68 11.24 15.12 9.84 8.25 11.46 29.98 38.98 34.51 16.25 31.02 16.50 9.43 1.73 13.62 9.12 0.93 29.50 4.93 45 ER14a ExonRegion 0 65.93 268.06 71.90 148.44 138.44 154.50 136.25 64.40 66.41 138.28 180.06 273.45 244.30 203.95 108.62 174.31 173.33 103.85 137.43 104.32 177.69 108.73 104.89 46 E14a_E15a KnownJunction 0 126.69 293.17 69.99 177.07 208.23 353.66 199.88 67.57 80.82 163.59 181.20 277.14 189.44 184.65 116.57 195.85 166.53 103.26 229.18 113.20 137.58 169.19 109.86 47 ER15a ExonRegion 0 77.97 191.79 68.58 189.52 157.94 222.44 160.46 70.86 64.86 164.50 182.59 259.84 201.89 179.17 122.68 168.24 146.90 90.57 125.07 111.39 113.23 127.70 80.33 48 E15a_E16a KnownJunction 0 92.02 230.75 56.33 157.86 151.44 186.71 144.01 70.32 61.72 180.70 174.25 291.24 174.50 150.33 131.41 173.80 156.15 75.24 95.25 93.96 121.76 111.08 74.52 49 ER16a ExonRegion 0 67.57 145.03 67.97 150.99 153.30 203.49 166.37 86.86 59.38 150.27 184.45 247.08 168.15 141.10 111.35 132.74 163.36 61.09 89.63 91.06 90.67 101.07 71.87 50 E16a_E17a KnownJunction 0 112.39 168.00 92.60 189.65 248.30 295.00 221.30 93.61 61.80 141.62 202.95 175.71 202.10 182.65 139.32 111.77 160.73 36.52 88.94 87.63 45.34 108.51 101.07 51 E16a_E18a KnownJunction 0 2.89 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER17a ExonRegion 0 124.22 162.27 90.85 185.54 186.96 218.28 174.71 83.58 61.00 178.66 193.41 277.25 197.44 135.33 134.53 133.16 143.01 43.03 85.74 108.67 64.12 107.47 75.76 53 E17a_E18a KnownJunction 0 111.43 174.71 107.62 219.59 163.84 204.71 204.08 89.54 77.08 211.40 163.67 259.88 218.49 95.00 105.45 113.65 158.95 32.62 76.52 100.86 67.15 85.97 56.25 54 E18_Aa NovelBoundary 0 19.19 0.00 4.88 14.18 11.97 13.12 7.68 14.46 16.78 6.53 4.74 0.00 0.00 4.94 5.19 4.36 7.48 1.70 4.61 6.14 0.00 3.12 7.43 55 ER18a ExonRegion 0 126.12 158.69 106.57 206.54 201.96 267.66 192.09 86.33 74.44 179.48 194.07 315.77 184.38 148.61 148.48 165.80 164.53 62.62 108.01 117.74 84.37 142.90 91.02 56 E18_Da NovelBoundary 0 24.15 15.39 8.22 26.57 25.72 41.23 23.32 31.83 24.51 19.47 4.42 24.76 0.00 4.77 4.45 0.00 13.93 5.68 4.80 8.56 8.15 7.65 12.04 57 E18a_E19a KnownJunction 1 95.57 150.96 128.71 193.45 246.60 222.71 273.63 94.88 67.45 165.79 185.36 328.61 116.88 120.49 193.46 123.47 183.26 44.73 72.94 76.32 117.93 127.92 75.20 58 I18 Intron 0 30.18 20.89 10.59 16.20 17.14 31.03 19.52 20.86 16.02 13.86 8.88 9.97 10.34 5.08 9.69 6.82 6.38 4.23 6.16 7.97 1.60 11.83 3.90 59 I18_SR1 SilentIntronRegion 0 30.33 20.99 10.64 16.28 17.22 31.18 19.61 20.96 16.09 13.92 8.92 10.02 10.39 5.10 9.74 6.86 6.41 4.25 6.19 8.01 1.61 11.89 3.92 60 E19_Aa NovelBoundary 0 28.38 33.55 9.99 20.61 33.36 21.41 27.16 19.80 20.72 14.67 7.16 6.00 6.82 7.06 9.64 3.50 3.65 8.25 21.18 3.26 0.00 14.27 4.35 61 ER19a ExonRegion 0 148.60 225.16 132.48 229.13 181.60 204.72 190.52 97.34 76.86 175.04 198.82 307.39 176.47 152.31 152.70 166.07 190.37 74.59 111.80 109.41 111.88 138.70 105.45 62 E19a_E20a KnownJunction 0 188.26 251.86 159.25 264.54 178.18 299.32 247.62 111.11 80.61 188.54 169.99 236.48 210.86 127.44 222.02 158.85 196.73 66.04 138.83 117.29 80.25 149.29 79.47 63 ER20a ExonRegion 0 183.18 208.05 155.33 238.73 195.19 308.82 196.59 132.11 70.57 191.06 178.42 294.76 213.86 138.54 192.50 174.47 158.82 72.08 121.18 107.06 89.10 132.89 125.79 64 E20a_E21a KnownJunction 0 316.20 246.54 134.89 234.77 290.92 240.83 226.64 173.58 71.50 205.36 190.31 230.78 328.71 149.04 247.85 153.21 185.69 68.36 165.09 112.37 105.21 128.16 146.48 65 ER21a ExonRegion 0 201.68 211.82 140.83 222.48 203.21 211.08 185.93 141.90 69.43 200.74 201.33 260.62 201.98 169.52 214.10 172.86 178.98 104.30 129.93 101.77 120.47 127.26 115.65 66 E21a_E22a KnownJunction 0 193.59 323.82 137.90 235.87 247.79 343.55 264.62 166.39 81.02 233.32 223.48 269.34 227.58 187.48 288.28 190.63 225.25 112.21 210.45 122.91 153.08 140.84 105.42 67 E21a_E23a NovelJunction 0 3.78 13.42 8.25 9.29 8.06 8.12 21.20 0.00 3.01 14.72 7.05 0.00 0.00 5.47 14.96 11.45 9.54 2.49 0.00 14.06 2.53 3.12 0.00 68 ER22a ExonRegion 0 222.80 213.36 146.42 233.59 197.35 245.39 158.25 121.54 71.91 216.42 170.92 197.74 167.46 205.07 245.57 179.20 166.07 120.89 126.46 101.32 168.57 117.99 115.77 69 E22_Da KnownBoundary 0 333.32 183.06 175.69 286.31 200.68 258.60 125.60 143.68 82.64 228.76 130.19 215.47 210.05 177.47 257.25 217.38 118.00 173.19 125.65 86.74 194.85 109.61 153.91 70 E22a_E23b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER22b ExonRegion 0 292.15 227.78 157.52 258.86 174.16 261.65 160.77 124.54 83.68 203.82 203.91 170.70 186.88 190.63 305.43 194.89 147.52 167.05 136.45 112.23 190.42 126.48 130.66 72 E22b_E23a KnownJunction 1 255.75 287.71 108.10 198.54 150.85 256.44 256.45 133.33 72.34 197.92 157.04 199.72 213.95 168.64 350.08 135.69 160.82 123.03 105.79 120.48 166.18 105.81 108.58 73 E23_Ab NovelBoundary 0 176.03 280.34 116.14 161.68 216.98 295.80 238.04 117.55 56.39 167.91 101.87 154.55 143.33 177.23 258.24 118.17 129.87 95.30 139.20 80.98 164.51 127.37 84.51 74 ER23a ExonRegion 0 177.60 267.14 124.32 188.70 198.25 282.74 221.52 127.20 67.99 195.50 154.02 195.42 176.94 198.44 298.43 138.74 158.74 118.68 126.26 104.64 181.00 128.04 105.32 75 ER23b ExonRegion 0 169.65 245.31 154.21 227.90 352.63 295.30 202.22 134.27 71.35 201.48 158.91 165.41 200.83 207.58 317.92 212.75 152.68 156.73 131.57 97.52 189.37 122.88 114.10 76 E23a_E24a KnownJunction 1 162.77 195.69 140.15 209.70 157.64 142.93 105.95 135.13 70.08 176.91 109.76 114.49 242.52 236.68 385.56 187.39 194.86 122.95 84.71 111.98 146.10 95.16 123.09 77 ER24a ExonRegion 1 120.10 165.64 83.24 145.07 116.40 103.41 76.50 66.99 39.80 113.59 48.83 67.13 97.45 75.06 171.03 55.56 63.51 35.73 41.64 55.98 56.61 56.86 36.09