Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TERF1 Gene 0 97.12 138.27 102.78 137.43 115.27 124.42 121.10 118.16 122.58 121.62 104.16 117.02 102.57 72.69 56.74 55.53 76.57 67.87 51.50 100.23 51.10 113.20 57.48 2 276602 Transcript 1 68.01 40.85 88.47 51.24 71.14 105.22 139.42 57.91 53.12 84.37 112.82 127.54 79.86 77.29 34.12 41.87 84.90 7.88 3.76 61.17 18.10 62.70 15.37 3 276603 Transcript 0 36.33 124.58 62.34 156.48 93.83 62.60 85.39 98.92 112.35 100.26 63.61 95.60 103.54 17.79 13.49 32.04 42.51 48.08 42.30 92.91 24.57 38.40 16.03 4 379182 Transcript 0 0.00 0.00 0.26 0.00 0.08 0.00 0.92 0.00 0.00 0.32 0.00 0.00 0.00 0.19 0.03 0.00 0.46 0.64 0.45 0.30 0.00 0.00 0.41 5 ER1a ExonRegion 1 28.50 51.43 14.46 13.34 37.66 117.55 96.88 9.39 20.55 23.62 67.09 0.00 6.22 53.88 26.46 57.33 65.40 120.07 44.12 54.11 98.05 54.13 52.20 6 E1_Ab KnownBoundary 0 13.11 16.51 17.80 14.35 27.59 20.44 5.87 15.98 31.86 17.14 17.00 0.00 6.82 6.59 4.45 46.31 12.90 46.30 9.60 17.58 16.80 3.12 16.48 7 ER1b ExonRegion 1 5.01 5.05 10.49 4.11 9.80 7.71 5.88 2.11 19.02 17.09 56.31 0.00 7.79 20.68 13.87 12.81 72.43 20.35 2.25 32.23 101.50 2.91 3.84 8 E1_Da KnownBoundary 1 3.78 9.67 14.13 5.19 16.98 16.58 2.25 6.90 43.06 22.99 98.29 0.00 20.45 33.37 8.90 8.12 120.06 13.27 0.00 77.79 161.12 8.51 13.06 9 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 1 1.26 6.49 7.14 8.23 5.51 3.95 3.06 5.35 11.42 12.99 31.34 0.00 7.31 39.14 33.31 13.66 39.74 29.64 18.50 43.70 56.41 32.13 16.66 11 E1_Ac KnownBoundary 0 6.52 20.98 28.59 31.23 7.56 4.83 6.40 16.39 32.55 36.94 31.64 0.00 0.00 94.77 74.79 46.40 18.33 114.29 47.62 81.05 47.69 92.59 55.83 12 ER1d ExonRegion 1 14.56 50.87 35.81 36.46 25.00 46.39 36.78 26.37 41.25 58.70 62.27 4.18 19.40 58.86 33.28 54.03 50.81 80.50 29.29 67.76 62.53 54.35 52.76 13 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 7.39 0.00 3.89 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1b_E2a KnownJunction 0 40.67 126.03 60.05 73.98 83.36 121.86 137.57 52.12 104.95 99.55 78.70 13.65 37.98 39.79 24.48 35.03 72.09 63.05 18.17 72.03 55.11 36.56 29.79 15 ER1e ExonRegion 0 0.00 0.00 0.51 0.00 0.16 0.00 1.84 0.00 0.00 0.65 0.00 0.00 0.00 0.37 0.06 0.00 0.92 1.29 0.89 0.60 0.00 0.00 0.82 16 ER2a ExonRegion 1 78.07 128.05 71.16 79.35 80.89 156.68 142.89 57.69 77.03 92.43 132.56 23.77 32.54 52.38 28.38 37.00 79.87 52.24 20.80 90.54 82.13 63.59 32.27 17 E2a_E3a KnownJunction 0 185.44 194.37 107.71 127.02 46.01 37.25 36.21 93.98 117.62 137.75 143.19 69.62 46.59 27.96 9.64 48.19 83.50 63.55 20.89 90.38 49.24 37.47 28.77 18 ER3a ExonRegion 0 48.71 124.75 82.60 118.66 46.26 82.69 85.35 90.76 111.02 134.96 116.07 82.01 93.80 76.23 39.21 44.83 63.61 44.18 38.28 97.31 42.52 98.92 39.16 19 E3a_E4a KnownJunction 0 62.38 146.49 106.89 179.70 258.66 181.20 213.04 117.76 147.77 152.15 83.92 119.14 105.35 23.78 25.47 53.06 45.44 21.68 46.50 72.99 15.81 51.31 28.26 20 ER4a ExonRegion 1 57.44 156.59 101.09 144.86 138.43 149.91 165.83 127.59 158.44 134.78 75.87 165.86 168.52 80.44 60.23 45.54 39.23 39.21 41.12 85.40 7.19 103.39 47.97 21 E4a_E5a KnownJunction 0 113.21 263.24 159.66 248.49 165.70 178.76 240.60 217.98 254.71 213.47 160.04 268.44 287.16 177.41 169.36 86.22 90.70 47.96 50.17 212.40 20.51 233.12 88.95 22 ER5a ExonRegion 0 93.62 176.38 118.45 176.87 87.60 128.28 128.42 151.74 170.12 180.39 150.43 162.99 176.75 81.00 57.41 43.61 83.07 38.40 39.24 121.77 28.88 113.89 48.36 23 E5_Da NovelBoundary 0 56.38 36.11 24.84 42.65 15.87 10.22 22.13 39.35 24.88 15.42 4.69 0.00 0.00 2.35 0.00 0.00 3.93 3.90 7.25 0.00 3.15 17.45 3.33 24 E5a_E6a KnownJunction 0 279.46 409.93 154.76 236.40 303.82 448.32 337.31 206.60 183.59 204.04 219.85 416.39 385.04 216.73 213.86 80.24 143.71 76.15 77.74 182.61 59.92 149.10 98.00 25 I5 Intron 0 19.73 46.56 10.02 21.58 15.41 7.54 18.15 12.89 10.85 10.43 0.66 7.79 10.61 0.64 3.46 0.61 1.13 2.02 4.80 10.79 2.41 6.28 3.62 26 I5_SR1 SilentIntronRegion 0 19.90 46.99 10.11 21.78 15.55 7.61 18.31 13.00 10.95 10.53 0.67 7.86 10.68 0.65 3.50 0.62 1.14 2.04 4.84 10.89 2.44 6.34 3.66 27 E6_Aa NovelBoundary 0 10.82 48.48 11.21 25.14 62.48 51.45 32.33 17.66 20.72 10.93 0.00 11.70 0.00 0.00 4.45 0.00 18.05 6.72 7.44 24.54 7.97 5.57 8.71 28 ER6a ExonRegion 0 105.41 191.68 126.23 190.10 253.51 234.27 261.44 148.83 173.63 180.04 213.27 334.63 322.45 136.57 97.69 76.83 147.02 66.16 44.45 174.99 43.98 160.78 65.83 29 E6a_E7a KnownJunction 0 35.56 134.32 75.19 163.92 132.09 84.67 131.69 119.07 93.05 84.40 59.07 128.14 103.40 11.36 18.91 26.92 34.50 31.75 40.66 94.15 28.29 45.13 27.15 30 E6a_E8a KnownJunction 0 68.01 40.85 88.47 51.24 71.14 105.22 139.42 57.91 53.12 84.37 112.82 127.54 79.86 77.29 34.12 41.87 84.90 7.88 3.76 61.17 18.10 62.70 15.37 31 I6_SR1 SilentIntronRegion 0 15.92 28.02 7.18 21.38 13.11 18.69 22.87 22.75 22.60 15.18 7.13 12.89 17.21 4.78 5.07 8.22 8.17 9.28 7.42 20.34 7.38 13.65 6.70 32 E7_Aa NovelBoundary 0 6.00 15.66 18.15 50.38 12.48 39.98 33.43 22.51 21.59 18.32 6.84 0.00 14.61 7.00 0.00 0.00 0.00 7.34 9.41 11.82 3.15 14.39 3.41 33 ER7a ExonRegion 0 25.12 115.17 61.13 143.28 75.81 51.80 63.57 100.54 110.40 98.65 67.81 93.08 107.87 17.16 16.01 25.96 51.05 51.95 36.26 83.72 27.00 38.16 13.51 34 E7_Da NovelBoundary 1 9.93 8.68 13.01 27.10 12.05 15.50 36.79 26.57 42.42 17.41 15.11 55.82 19.64 4.94 4.45 4.19 8.98 6.51 8.75 37.14 5.87 16.72 8.28 35 E7a_E8a KnownJunction 0 48.30 124.25 50.71 162.25 73.60 51.33 60.90 77.14 133.59 117.74 63.96 65.57 99.34 24.84 5.56 43.24 41.98 60.52 49.98 100.86 18.41 31.90 7.43 36 I7 Intron 0 21.27 32.31 13.95 32.58 20.30 20.67 31.21 14.52 19.44 13.05 9.71 19.62 12.57 4.91 3.50 6.70 8.63 7.82 5.22 18.98 8.25 15.06 7.23 37 I7_AR1 ActiveIntronRegion 0 17.54 22.97 13.19 34.03 18.13 22.83 28.65 15.97 21.12 12.52 13.70 23.77 12.80 5.11 0.97 4.69 11.57 6.25 6.75 23.77 9.62 15.61 6.83 38 I7_SR1 SilentIntronRegion 0 17.01 17.64 6.23 26.29 13.54 13.32 31.04 18.45 15.01 15.20 11.99 17.19 13.16 6.62 3.70 12.01 8.49 13.13 7.53 22.62 12.09 12.83 16.61 39 I7_AR2 ActiveIntronRegion 0 24.76 42.28 16.90 33.94 23.74 21.94 32.79 12.53 20.01 12.70 6.83 18.20 12.30 4.27 4.84 6.12 7.09 7.01 3.67 15.25 6.29 15.54 4.45 40 E8_Aa NovelBoundary 0 46.53 41.18 45.03 83.54 48.47 22.37 84.26 33.97 41.98 25.09 17.21 18.91 26.95 9.89 4.45 25.81 4.77 11.40 16.94 34.77 7.85 21.92 11.10 41 ER8a ExonRegion 0 151.38 133.88 145.02 194.85 128.26 130.82 169.74 141.40 156.26 167.07 207.03 240.24 226.55 139.14 82.59 99.50 143.30 73.39 64.43 154.79 64.58 139.69 76.64 42 E8a_E9a KnownJunction 1 461.49 236.27 195.14 317.14 305.77 317.03 331.75 230.06 216.00 210.41 162.20 422.09 431.47 209.90 107.30 114.33 156.43 65.99 66.26 196.67 87.23 242.55 115.75 43 ER9a ExonRegion 0 355.19 232.08 160.66 247.08 216.61 235.82 206.16 177.91 203.58 206.55 231.76 346.52 300.25 182.07 119.37 124.89 196.05 97.98 90.02 214.77 123.56 205.51 79.94 44 E9a_E10a KnownJunction 0 341.54 244.89 180.74 295.53 165.79 184.16 224.88 188.78 148.38 232.01 193.89 317.05 175.96 200.72 120.77 113.65 132.30 98.49 59.01 169.44 83.15 217.81 55.40 45 ER10a ExonRegion 0 113.42 161.66 125.32 162.10 138.46 138.75 132.08 146.16 141.85 135.91 100.44 119.69 93.60 72.86 64.44 60.56 75.86 78.52 63.48 105.46 49.94 135.44 69.57 46 IG14 Intergenic 0 5.00 4.72 1.56 9.83 10.67 8.38 13.69 8.48 16.89 6.22 6.44 7.42 10.22 3.55 2.92 3.34 6.77 3.99 2.22 10.87 3.58 4.52 6.60 47 IG14_SR1 SilentIntergenicRegion 0 1.59 4.58 4.11 15.99 15.05 7.56 18.87 6.76 17.26 10.90 10.87 16.33 6.10 2.94 1.54 3.34 6.19 2.42 4.78 9.57 0.83 4.69 3.30 48 IG14_SR2 SilentIntergenicRegion 0 5.40 4.75 1.26 9.13 10.18 8.48 13.10 8.68 16.86 5.69 5.93 6.40 10.71 3.63 3.08 3.34 6.85 4.17 1.93 11.03 3.91 4.50 6.98