Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NIPAL2 Gene 0 23.41 11.04 4.34 8.63 12.04 33.30 6.05 17.53 39.84 23.08 3.54 77.86 138.84 86.93 37.52 70.45 93.02 0.62 0.50 11.84 62.03 61.78 47.55 2 430223 Transcript 0 13.56 9.27 5.91 3.36 18.42 50.37 0.00 12.40 19.36 6.31 0.00 57.47 190.57 34.96 20.52 29.39 72.74 0.00 0.00 10.99 37.00 28.60 7.26 3 341166 Transcript 0 3.25 0.11 0.00 0.37 0.00 0.00 0.00 1.42 2.44 0.55 0.00 0.00 1.09 3.85 0.16 0.21 0.41 0.00 0.00 0.00 1.10 0.37 0.00 4 ER1a ExonRegion 0 1.03 0.70 0.12 0.00 0.00 5.01 0.36 2.37 4.74 3.17 0.00 2.71 2.89 16.74 6.49 11.33 21.81 0.60 0.00 3.19 17.35 5.94 10.51 5 E1a_E2a KnownJunction 0 6.82 5.99 1.83 0.00 0.00 15.90 3.62 6.78 17.39 11.95 0.00 12.45 6.82 100.59 24.72 57.16 63.11 0.00 0.00 12.66 59.18 26.27 15.37 6 ER2a ExonRegion 0 5.03 2.24 1.78 1.19 5.24 31.52 2.05 14.13 16.24 9.16 1.68 18.95 24.88 78.17 22.37 61.90 73.43 2.30 0.00 9.56 55.25 40.49 35.20 7 E2a_E3a KnownJunction 0 18.60 0.00 4.55 1.83 8.06 16.41 4.50 20.41 17.97 14.88 5.00 11.70 68.50 95.12 24.11 74.60 96.21 4.39 0.00 8.76 66.72 56.52 75.38 8 ER3a ExonRegion 0 13.17 5.34 6.32 7.92 4.79 13.39 3.29 18.31 24.72 14.78 1.62 29.27 64.49 106.05 34.39 57.11 110.70 1.26 0.94 12.54 88.35 52.43 47.99 9 E3a_E4a KnownJunction 1 10.22 14.80 6.00 8.56 7.13 23.00 2.25 15.77 24.39 11.31 0.00 44.26 61.52 84.88 28.93 45.46 168.49 0.00 0.00 5.62 83.09 59.89 47.55 10 ER4a ExonRegion 0 10.23 7.42 7.64 9.15 6.78 44.04 6.66 13.68 37.96 16.84 3.29 41.13 117.80 117.07 28.96 53.89 137.48 0.00 0.00 12.34 99.50 58.93 43.22 11 E4a_E5a KnownJunction 1 6.37 9.08 5.50 9.09 4.07 34.92 13.78 13.02 42.94 24.18 0.00 64.37 144.80 103.83 48.46 47.77 142.03 0.00 0.00 30.36 93.41 62.64 49.25 12 ER5a ExonRegion 0 10.76 6.33 3.05 9.37 9.91 39.83 6.52 17.00 46.64 26.83 3.66 90.49 171.19 133.75 40.14 104.29 122.05 0.00 0.00 22.18 62.70 91.13 73.46 13 E5a_E6a KnownJunction 0 7.33 6.05 2.96 9.02 15.70 18.68 6.62 9.98 69.41 36.94 4.63 68.87 218.65 83.47 54.39 77.76 99.30 0.00 0.00 24.80 37.99 134.47 61.12 14 I5_AR2 ActiveIntronRegion 1 2.82 1.80 0.81 1.30 1.19 3.25 0.29 1.14 6.77 1.52 0.00 14.55 20.11 31.26 3.56 12.83 24.89 0.61 0.00 2.82 12.74 6.47 3.91 15 ER6a ExonRegion 0 7.59 5.28 1.16 7.46 7.94 40.76 4.26 10.16 55.58 29.50 7.43 96.77 243.06 115.06 39.78 89.04 127.78 0.90 0.00 24.48 57.55 80.85 54.49 16 E6a_E7a KnownJunction 0 14.89 6.31 1.83 14.28 10.53 44.46 4.11 4.97 53.67 29.52 7.21 94.38 167.20 122.37 56.00 78.70 144.09 0.00 0.00 20.77 27.74 48.37 66.58 17 ER7a ExonRegion 0 25.80 13.19 3.78 8.67 8.58 45.20 11.05 20.11 54.79 36.26 6.86 133.90 198.77 107.51 38.89 90.45 141.02 0.12 0.00 20.29 45.82 110.47 60.50 18 E7a_E8a KnownJunction 0 33.71 20.52 1.21 9.06 16.04 50.08 3.53 8.26 43.14 27.24 10.27 121.09 282.29 85.82 33.99 68.70 105.47 0.00 0.00 23.71 41.02 71.58 54.03 19 ER8a ExonRegion 0 25.23 15.95 3.66 8.82 11.15 36.63 7.33 11.98 41.11 22.95 4.08 136.35 233.08 93.58 34.72 61.85 89.87 0.96 0.00 13.24 28.38 65.62 40.62 20 E8a_E9a KnownJunction 0 31.12 23.61 1.74 11.39 29.12 70.47 24.60 17.00 38.98 40.43 0.00 135.94 197.23 76.58 14.22 34.69 69.28 0.00 0.00 12.02 12.42 100.36 48.66 21 ER9a ExonRegion 1 11.94 16.49 0.59 8.22 18.06 40.74 10.86 7.51 29.12 24.41 4.71 147.95 231.57 68.49 30.46 23.68 69.78 0.00 0.00 17.05 25.55 70.06 21.89 22 E9_Da NovelBoundary 0 3.26 15.19 1.83 3.40 0.00 18.68 8.44 2.55 26.62 5.10 0.00 44.86 94.47 24.02 14.09 38.71 13.28 0.00 0.00 5.31 5.68 19.10 14.85 23 E9a_E10a KnownJunction 0 2.74 9.41 0.00 5.03 23.60 8.69 5.70 2.55 16.55 8.76 0.00 134.74 183.43 42.50 14.09 14.53 30.67 0.00 0.00 6.07 10.32 43.72 7.51 24 E9a_E12a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 5.11 0.00 0.00 4.37 1.02 0.00 6.30 8.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 8.88 0.00 25 I9 Intron 0 13.41 6.21 0.92 5.83 6.71 18.55 6.76 9.16 18.04 7.56 2.03 34.99 56.62 50.55 18.45 41.31 44.68 0.34 0.00 3.30 25.60 18.61 17.54 26 I9_AR1 ActiveIntronRegion 0 2.70 2.82 0.00 0.68 0.00 1.73 1.40 2.11 2.06 3.50 1.07 16.60 41.95 8.66 4.67 3.96 9.72 0.00 0.00 0.00 0.49 1.50 3.26 27 I9_AR2 ActiveIntronRegion 0 13.90 5.84 0.45 9.69 8.98 17.66 7.50 11.84 25.82 10.09 1.33 60.26 99.67 56.84 17.20 44.98 40.98 0.46 0.00 2.10 20.31 25.66 15.86 28 I9_AR3 ActiveIntronRegion 0 14.24 6.41 1.10 4.97 6.85 19.99 6.97 8.74 17.58 7.74 2.11 30.52 47.15 51.91 18.45 43.69 49.37 0.26 0.00 3.84 31.06 17.49 19.66 29 I9_SR1 SilentIntronRegion 0 13.92 7.47 1.03 7.11 3.01 13.32 5.63 13.04 11.52 4.61 1.78 23.95 46.90 50.88 29.56 35.06 40.75 1.30 0.00 2.43 11.19 18.65 17.80 30 I9_AR4 ActiveIntronRegion 0 4.83 4.99 0.42 3.88 3.39 15.10 4.59 3.84 9.98 1.43 3.90 23.81 44.78 27.25 15.82 19.83 16.45 0.00 0.00 2.73 0.41 14.65 2.20 31 E10_Aa NovelBoundary 0 26.75 14.47 1.27 3.60 4.16 20.95 2.08 15.32 26.65 12.87 0.00 36.61 39.12 33.43 19.66 16.15 25.71 0.00 0.00 2.49 3.09 41.27 3.67 32 ER10a ExonRegion 0 20.21 17.57 3.06 11.62 15.46 22.20 6.66 17.50 21.05 16.49 0.98 138.09 191.21 67.73 48.99 34.66 74.08 0.00 0.00 13.08 21.83 67.48 21.21 33 E10_Da NovelBoundary 0 9.11 6.31 2.99 7.16 16.38 5.79 9.49 10.80 20.57 15.79 0.00 36.91 76.13 22.37 28.43 14.87 8.79 0.00 0.00 3.13 3.15 48.31 4.35 34 E10a_E11a KnownJunction 0 3.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E10a_E12a KnownJunction 0 13.56 9.27 5.91 3.36 18.42 50.37 0.00 12.40 19.36 6.31 0.00 57.47 190.57 34.96 20.52 29.39 72.74 0.00 0.00 10.99 37.00 28.60 7.26 36 I10 Intron 0 19.75 6.83 2.52 5.82 7.40 26.35 7.58 11.44 23.81 11.98 1.53 25.07 44.84 51.24 38.68 44.17 51.50 0.54 0.00 4.73 38.83 26.13 17.83 37 I10_AR1 ActiveIntronRegion 0 20.50 8.76 1.36 6.40 8.17 27.47 7.96 13.47 25.71 14.76 1.63 36.38 53.08 47.11 37.31 40.06 48.08 1.02 0.00 5.53 31.03 27.14 17.98 38 I10_SR1 SilentIntronRegion 0 17.89 3.71 4.62 4.65 6.84 27.43 6.80 10.81 24.34 8.99 1.63 12.18 29.27 60.11 40.85 54.72 59.52 0.01 0.00 4.51 54.91 25.52 19.10 39 I10_AR2 ActiveIntronRegion 0 22.31 7.68 1.48 6.79 5.69 18.44 8.41 4.38 13.95 8.69 0.77 13.42 55.69 43.85 38.95 31.38 43.41 0.00 0.00 1.81 25.88 23.80 13.58 40 ER11a ExonRegion 0 2.80 0.22 0.00 0.73 0.00 0.00 0.00 2.84 3.31 1.11 0.00 0.00 2.18 5.34 0.31 0.42 0.83 0.00 0.00 0.00 2.20 0.74 0.00 41 I11 Intron 0 53.97 9.17 4.43 7.75 7.43 24.18 14.93 16.98 23.31 10.97 1.34 25.84 62.74 44.83 41.15 42.28 45.83 0.48 0.00 1.85 30.17 26.38 18.85 42 I11_AR1 ActiveIntronRegion 0 54.34 9.23 4.47 7.80 7.48 24.34 15.03 17.10 23.47 11.04 1.35 26.02 63.15 45.14 41.43 42.57 46.14 0.48 0.00 1.86 30.38 26.56 18.98 43 E12_Aa NovelBoundary 0 88.83 14.80 1.69 13.38 12.14 20.73 11.97 17.87 57.46 16.63 0.00 30.76 93.01 30.49 41.66 35.46 47.78 2.45 0.00 0.00 23.17 36.37 11.61 44 ER12a ExonRegion 0 41.40 17.03 6.88 12.87 20.17 46.22 8.26 26.38 58.13 32.56 4.87 99.08 178.97 104.53 52.70 99.91 110.40 0.65 1.05 11.30 88.36 76.07 64.74 45 IG23_AR3 ActiveIntergenicRegion 0 72.29 21.93 11.86 19.94 30.74 57.08 14.13 38.96 60.58 37.50 2.63 97.21 209.77 82.19 81.50 77.51 87.80 1.49 1.08 12.92 55.56 76.17 50.57 46 IG23_AR1 ActiveIntergenicRegion 0 16.09 22.01 13.02 28.65 19.80 20.53 24.15 12.81 10.30 25.08 32.46 71.05 24.53 67.92 72.92 42.64 45.16 31.66 24.83 44.38 7.22 9.76 5.11