Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NBN Gene 0 54.18 59.22 37.71 44.11 57.55 90.90 31.99 35.55 46.73 37.17 309.66 289.23 323.07 262.68 158.98 163.14 202.19 25.82 17.23 35.59 29.79 99.31 53.18 2 265433 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 396252 Transcript 0 1.61 0.66 0.52 0.00 10.08 2.37 0.67 1.45 3.12 1.78 56.66 70.15 81.63 36.91 32.92 63.56 31.58 0.00 2.09 0.67 7.68 27.73 12.33 4 494804 Transcript 0 3.73 5.87 0.59 2.07 2.06 0.00 1.00 0.41 2.60 0.56 15.44 18.22 27.15 13.53 3.98 12.26 11.54 2.72 1.92 7.06 2.05 7.36 5.20 5 409330 Transcript 0 0.00 0.01 0.00 0.00 0.00 0.47 0.00 0.00 0.00 0.00 1.00 0.00 0.00 1.46 0.53 2.13 0.85 0.36 0.82 0.28 0.29 0.27 0.00 6 452387 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 474821 Transcript 0 9.87 4.18 4.54 11.44 9.95 10.49 5.16 5.88 3.34 4.98 14.18 8.64 9.67 10.20 8.34 9.75 6.90 2.96 0.64 3.87 1.41 8.33 2.31 8 ER1a ExonRegion 0 0.00 0.58 0.00 0.00 0.00 0.52 0.95 0.00 0.00 0.00 0.55 0.00 0.00 1.39 2.49 2.12 1.89 0.00 0.00 0.61 0.00 0.00 0.00 9 ER1b ExonRegion 1 12.85 31.99 4.12 6.61 7.87 35.41 7.34 5.86 7.20 3.88 67.47 2.32 7.84 86.73 31.13 94.13 61.11 29.06 6.07 13.94 39.92 28.63 45.31 10 E1a_E3a KnownJunction 1 6.30 6.18 1.36 4.13 0.00 16.24 10.51 2.05 20.83 5.59 93.02 6.00 11.69 68.99 27.94 98.78 91.07 21.68 17.22 15.21 51.03 43.35 39.61 11 ER2a ExonRegion 0 0.00 0.01 0.00 0.00 0.00 0.95 0.00 0.00 0.00 0.00 2.00 0.00 0.00 0.45 1.06 0.24 1.71 0.71 1.65 0.56 0.58 0.55 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 5.02 11.37 7.93 17.14 7.05 19.98 3.19 14.67 23.06 17.48 229.63 115.60 87.54 201.98 64.78 153.20 168.52 43.77 16.28 38.85 62.49 78.27 48.81 14 E3_Da KnownBoundary 0 0.00 0.00 0.00 3.66 3.48 0.00 5.26 0.00 1.30 0.00 18.85 13.65 19.32 23.19 0.00 16.92 12.44 2.57 4.05 8.63 2.53 8.08 0.00 15 E3a_E4a KnownJunction 0 3.78 0.00 1.27 0.00 4.33 2.78 0.00 3.53 3.21 1.56 43.33 58.82 34.74 33.96 15.20 72.20 34.32 0.00 0.00 0.00 6.05 20.51 10.67 16 E3a_E5a KnownJunction 1 3.78 11.84 10.14 17.88 18.17 48.67 5.70 14.13 32.29 26.94 145.72 162.95 127.26 237.45 47.47 122.10 125.57 43.11 8.38 35.47 19.34 91.85 72.05 17 ER3b ExonRegion 0 3.73 5.87 0.59 2.07 2.06 0.00 1.00 0.41 2.60 0.56 15.44 18.22 27.15 13.53 3.98 12.26 11.54 2.72 1.92 7.06 2.05 7.36 5.20 18 E3_Db NovelBoundary 0 0.00 2.83 9.91 22.74 0.00 7.04 3.53 14.01 5.79 1.07 25.11 12.60 55.35 17.19 4.45 11.11 20.66 1.74 0.00 17.07 0.00 14.02 4.01 19 ER4a ExonRegion 1 1.06 1.99 0.29 0.00 9.26 1.43 0.24 0.83 3.36 2.27 61.12 82.00 88.74 32.97 23.73 67.88 23.96 0.00 1.47 2.00 8.77 29.92 18.56 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 16.64 2.90 1.77 0.00 2.78 1.50 65.54 69.62 121.42 43.79 59.83 50.59 36.47 0.00 4.80 0.00 8.22 32.76 7.77 21 I4 Intron 0 4.03 6.53 1.30 0.72 4.14 2.83 3.46 2.14 4.81 1.22 42.51 35.27 29.35 32.74 6.23 23.32 43.16 6.24 1.89 7.59 4.72 9.16 6.63 22 I4_SR1 SilentIntronRegion 1 3.98 7.86 1.47 1.05 5.52 1.96 3.51 1.33 4.87 1.34 37.54 36.00 31.82 25.91 4.19 17.10 42.57 6.52 1.54 8.33 4.71 10.35 6.04 23 I4_AR1 ActiveIntronRegion 0 4.20 3.62 0.94 0.00 1.08 4.86 3.42 4.01 4.75 0.95 54.37 34.14 24.24 48.66 10.94 37.73 45.10 5.68 2.72 6.03 4.81 6.63 8.07 24 ER5a ExonRegion 1 13.79 39.03 17.94 20.07 27.21 77.89 20.45 31.44 44.30 24.75 413.29 274.79 240.67 316.30 85.07 179.03 273.09 22.62 10.45 45.15 33.17 108.71 48.07 25 E5a_E6a KnownJunction 0 24.75 52.42 13.39 25.30 27.25 103.63 16.03 50.81 45.83 35.24 533.19 358.17 344.13 314.85 94.69 165.85 323.98 20.15 17.79 41.93 25.76 146.04 50.45 26 ER6a ExonRegion 1 27.78 45.70 33.07 33.99 44.62 73.23 21.94 38.77 62.71 41.85 609.43 487.25 495.00 396.30 112.26 225.29 390.56 36.74 16.92 52.29 43.08 144.79 76.37 27 E6a_E7a KnownJunction 1 37.64 50.91 30.63 42.79 49.83 32.77 46.19 43.83 50.95 30.68 583.73 432.74 480.65 546.12 145.87 262.15 387.10 19.86 21.74 68.97 47.75 171.39 78.70 28 E6a_E8a NovelJunction 0 3.63 0.00 1.77 1.40 0.00 0.00 0.00 0.00 1.56 3.17 16.43 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 29 E7_Ab NovelBoundary 0 15.26 20.39 12.98 23.94 16.89 23.11 24.86 26.29 26.13 16.41 173.41 151.40 185.70 106.83 50.44 74.42 158.67 6.55 3.76 29.98 24.34 74.15 29.96 30 ER7a ExonRegion 1 28.15 49.62 25.61 39.80 49.50 36.68 31.38 47.88 50.02 32.23 576.78 447.23 463.84 484.96 139.55 245.50 405.68 21.25 20.70 59.36 53.11 168.56 82.52 31 ER7b ExonRegion 0 34.97 60.10 38.82 30.95 40.68 97.02 26.51 40.29 66.16 39.31 573.82 551.13 575.08 375.79 122.47 220.89 413.24 28.66 20.77 58.51 49.18 139.91 101.16 32 E7a_E8a KnownJunction 0 37.78 55.65 37.70 31.16 32.94 108.52 31.71 25.30 56.68 49.00 508.44 455.10 588.76 409.74 147.72 262.32 346.80 33.83 26.45 38.61 61.41 121.30 79.30 33 ER8a ExonRegion 1 38.24 59.44 36.21 25.88 60.18 128.40 38.92 35.37 67.91 41.29 692.04 507.91 633.91 536.62 149.44 297.11 461.15 35.55 26.83 57.97 58.62 180.86 64.76 34 E8a_E9a KnownJunction 1 44.90 70.97 34.71 33.06 133.53 211.98 48.53 40.66 81.19 55.44 858.48 796.46 959.03 572.02 147.85 311.97 570.92 36.31 35.20 70.76 107.43 183.21 91.68 35 ER9a ExonRegion 0 54.41 86.18 38.66 29.99 56.36 131.69 36.76 40.31 70.15 50.62 714.56 517.01 894.20 574.96 192.51 386.19 533.30 66.40 34.05 72.58 74.49 181.75 118.72 36 E9a_E10a KnownJunction 1 81.35 107.15 43.61 38.52 86.93 111.64 43.46 61.32 63.95 40.21 682.28 596.29 900.10 650.07 175.78 445.95 534.92 82.04 75.30 90.44 80.50 189.40 113.19 37 ER10a ExonRegion 0 49.52 57.62 42.41 35.77 52.31 112.24 34.23 40.09 56.41 40.52 619.34 434.58 788.40 515.54 159.24 342.43 472.84 63.52 31.01 74.99 80.23 134.71 111.35 38 E10a_E11a KnownJunction 0 40.38 48.81 72.71 33.00 58.49 149.01 36.52 39.76 56.89 21.92 546.35 532.37 1026.39 614.22 290.25 353.67 455.63 89.04 36.80 84.31 112.06 161.47 148.02 39 ER11a ExonRegion 0 41.68 62.65 50.82 43.34 47.05 162.76 40.29 55.48 65.91 53.14 635.46 434.45 864.12 630.90 211.59 466.42 519.48 92.40 42.24 67.23 117.86 144.20 168.22 40 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E11a_E13a KnownJunction 0 57.27 73.41 42.49 41.95 75.21 99.03 35.46 61.16 65.31 57.14 655.85 423.44 732.09 512.92 172.32 371.10 430.95 70.97 52.80 48.32 97.11 142.67 136.50 42 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER13a ExonRegion 0 68.53 68.74 40.65 41.68 55.44 131.06 42.91 49.71 68.52 56.66 645.11 477.53 794.21 529.75 211.38 386.49 437.88 68.48 32.39 49.93 62.21 133.94 121.65 44 E13a_E14a KnownJunction 0 66.46 45.72 50.53 41.09 54.16 133.39 48.14 50.81 53.76 41.77 509.02 599.00 728.69 401.09 160.21 168.33 317.06 31.13 4.80 57.97 48.56 90.56 81.44 45 ER14a ExonRegion 0 64.58 76.97 45.48 45.08 66.42 121.03 49.59 44.00 59.34 40.68 502.92 522.94 623.02 379.77 215.47 194.05 277.64 30.23 18.19 46.03 29.75 118.90 71.78 46 E14a_E15a KnownJunction 0 74.98 101.17 35.39 40.15 88.54 142.59 54.67 58.00 49.39 40.21 441.37 564.48 542.01 336.75 339.45 185.25 239.92 17.78 4.33 45.32 10.26 92.77 69.49 47 ER15a ExonRegion 0 65.37 93.72 54.41 46.32 103.81 133.34 51.29 44.66 48.92 47.09 455.63 545.70 470.50 309.50 275.75 168.55 225.27 16.66 12.46 43.29 14.72 116.13 84.78 48 E15a_E16a KnownJunction 0 59.34 120.44 59.90 46.01 139.47 97.50 63.99 28.71 55.67 59.79 422.53 572.14 334.07 318.27 274.06 161.50 207.11 17.33 25.32 43.46 11.92 137.35 93.73 49 E15a_E17a NovelJunction 0 0.00 2.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.00 6.30 0.00 6.83 15.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER16a ExonRegion 0 75.76 105.39 66.80 41.00 75.52 106.54 49.56 44.15 47.90 55.94 489.58 481.07 414.17 331.72 262.84 198.83 264.37 17.72 19.34 44.03 24.69 142.77 55.70 51 E16a_E17a KnownJunction 0 114.84 122.61 70.46 58.60 92.36 125.38 58.87 50.07 53.36 45.42 565.51 526.82 463.28 421.80 283.08 182.77 319.49 22.97 7.81 59.32 36.20 161.47 71.02 52 ER17a ExonRegion 0 71.65 110.63 57.86 37.08 101.07 122.57 44.72 38.62 50.13 44.05 460.42 398.23 331.84 321.22 218.33 177.86 298.96 25.82 12.13 39.23 30.99 119.16 57.63 53 E17a_E18b KnownJunction 0 91.94 154.91 51.15 30.83 74.02 99.60 47.21 38.53 40.83 36.51 375.83 335.96 221.58 240.16 206.81 150.64 264.42 10.49 8.94 35.15 31.07 112.79 55.83 54 ER18a ExonRegion 0 9.87 4.18 4.54 11.44 9.95 10.49 5.16 5.88 3.34 4.98 14.18 8.64 9.67 10.20 8.34 9.75 6.90 2.96 0.64 3.87 1.41 8.33 2.31 55 E18_Ab KnownBoundary 0 17.56 11.51 8.16 24.77 11.88 7.50 6.49 9.36 6.16 10.05 16.37 38.56 6.66 4.59 0.00 13.07 4.77 0.00 0.00 3.07 5.19 4.78 0.00 56 ER18b ExonRegion 0 58.14 139.49 56.22 48.29 56.35 88.62 60.28 55.70 63.19 43.21 412.46 386.12 272.31 283.96 236.96 161.95 252.28 13.39 11.44 41.29 19.16 170.08 29.91 57 E18a_E19a KnownJunction 0 51.42 148.59 66.14 39.86 75.89 75.07 64.04 50.32 72.80 35.40 332.35 346.76 324.98 319.74 239.32 147.91 209.44 11.32 22.49 48.64 14.15 172.19 26.97 58 ER19a ExonRegion 0 58.72 107.41 43.77 51.78 93.68 120.62 47.74 44.67 60.88 40.46 238.34 371.40 339.76 250.85 171.13 123.38 129.17 17.06 19.89 39.99 9.65 150.20 49.27 59 E19_Da KnownBoundary 1 33.41 93.86 20.70 72.75 113.16 145.03 40.67 36.56 63.43 44.83 237.43 541.83 425.95 281.18 127.33 108.52 118.93 13.22 25.41 33.94 5.56 131.16 35.85 60 ER19b ExonRegion 0 86.63 73.85 54.76 75.87 87.38 116.64 41.45 48.19 59.31 50.81 227.62 266.92 221.17 234.05 221.83 143.03 146.58 20.54 20.17 35.16 23.38 109.66 44.32 61 E19_Db KnownBoundary 0 9.19 8.88 7.60 9.69 14.94 8.57 3.67 7.35 6.68 13.03 16.27 25.06 11.69 2.47 29.67 0.00 4.58 0.00 4.52 6.52 0.00 17.33 8.02 62 ER19c ExonRegion 0 14.64 8.33 3.98 8.13 6.09 5.91 4.31 3.70 4.66 7.02 11.48 7.58 14.26 2.82 12.41 1.04 7.56 0.64 1.46 5.18 0.00 3.31 2.24