Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZFHX4 Gene 0 9.74 80.37 6.27 21.78 12.74 148.09 64.08 100.77 50.06 0.65 6.39 0.29 0.27 0.04 0.04 0.01 0.04 28.67 60.51 66.54 96.04 39.41 40.68 2 458716 Transcript 0 0.00 2.30 0.71 0.03 1.01 0.00 3.62 2.41 1.61 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 1.04 6.02 0.00 1.63 0.93 1.76 3 50961 Transcript 0 0.00 1.13 0.00 0.00 0.00 0.20 0.15 0.10 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.53 0.00 0.00 0.12 0.00 4 455469 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 399468 Transcript 0 0.06 9.98 0.65 2.14 1.99 33.72 21.91 21.08 21.04 0.00 3.00 0.00 0.00 0.00 0.00 0.00 0.00 18.37 27.80 37.48 49.81 13.66 19.21 6 IG37_AR12 ActiveIntergenicRegion 0 0.00 4.03 0.00 2.33 0.51 6.99 0.76 15.74 2.33 0.00 0.18 0.00 0.00 0.22 0.00 0.00 0.00 0.53 0.61 0.00 1.90 0.00 0.56 7 IG37_SR11 SilentIntergenicRegion 0 0.19 4.90 0.19 0.80 1.05 8.72 1.26 18.86 4.01 0.00 0.32 0.00 0.00 0.24 0.00 0.04 0.00 0.11 1.20 1.06 0.53 0.32 0.00 8 IG37_AR13 ActiveIntergenicRegion 0 3.38 18.37 1.76 4.75 2.70 27.89 7.95 36.73 11.10 0.00 7.18 0.65 0.18 0.64 0.00 0.00 0.30 0.00 7.30 2.83 6.86 3.63 0.40 9 IG37_AR16 ActiveIntergenicRegion 0 0.18 14.06 0.66 2.39 0.00 26.11 2.08 10.85 4.83 0.00 5.31 1.40 0.00 0.00 0.00 0.00 0.00 0.00 3.70 2.50 8.83 2.45 0.00 10 IG37_AR18 ActiveIntergenicRegion 0 0.00 7.20 0.00 1.00 0.66 16.31 3.48 6.41 2.82 0.00 1.43 0.00 0.00 0.00 0.00 0.00 0.00 0.71 7.85 2.76 2.74 0.00 0.00 11 ER1a ExonRegion 0 1.62 13.62 1.68 1.97 4.92 33.76 33.41 18.24 10.95 0.00 4.32 0.00 0.00 0.00 0.00 0.00 0.51 18.93 91.87 38.44 65.94 18.18 39.93 12 E1a_E2a KnownJunction 0 0.00 2.50 0.00 6.06 0.00 72.23 76.36 22.92 22.11 0.00 2.32 0.00 0.00 0.00 0.00 0.00 0.00 19.03 8.47 74.59 42.13 8.82 23.99 13 I1_AR3 ActiveIntronRegion 0 0.57 21.18 0.98 3.45 1.43 28.72 4.60 15.52 4.16 0.00 4.92 0.00 0.00 0.00 0.00 0.00 0.00 3.68 9.31 3.59 13.53 0.65 0.00 14 ER2a ExonRegion 0 0.57 14.51 2.83 3.05 0.83 34.51 23.15 33.49 22.18 0.13 5.32 0.41 0.15 0.00 0.00 0.00 0.00 31.69 52.10 61.14 94.28 21.78 31.20 15 E2a_E3a KnownJunction 0 0.00 12.17 1.30 1.83 0.00 21.81 42.66 33.31 7.29 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 28.85 26.82 19.75 54.92 13.10 15.02 16 E2a_E3b KnownJunction 0 0.00 0.00 0.00 1.76 0.00 13.57 8.52 15.73 9.52 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 7.46 18.92 16.55 21.25 5.20 3.33 17 ER3a ExonRegion 0 0.00 11.02 3.89 1.31 3.12 9.77 20.60 29.58 13.18 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 25.05 21.49 23.40 57.85 15.06 18.59 18 E3_Ab KnownBoundary 0 0.00 24.47 5.50 2.06 3.57 2.90 14.75 24.93 24.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.58 34.07 27.36 59.06 18.92 20.15 19 ER3b ExonRegion 0 0.25 13.92 5.12 5.40 0.38 39.95 25.17 47.85 23.64 0.00 5.93 0.43 0.00 0.00 0.00 0.00 0.00 30.92 44.26 62.83 74.92 21.95 37.12 20 E3_Da KnownBoundary 0 0.00 0.00 2.37 1.76 0.00 0.00 4.24 3.90 3.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 2.45 4.35 21 E3a_E4a KnownJunction 0 0.00 11.64 1.30 6.69 0.00 38.39 14.22 36.39 22.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.35 35.48 73.25 97.18 35.58 66.50 22 ER3c ExonRegion 0 0.00 2.30 0.71 0.03 1.01 0.00 3.62 2.41 1.61 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 1.04 6.02 0.00 1.63 0.93 1.76 23 ER4a ExonRegion 0 0.93 12.19 0.87 5.02 2.94 47.72 24.37 39.15 25.30 0.00 6.40 0.78 0.00 0.00 0.00 0.00 0.00 25.14 41.67 67.93 93.86 24.71 35.62 24 E4a_E5a KnownJunction 0 0.00 36.64 0.00 5.89 0.00 44.58 29.41 22.14 23.18 0.00 4.58 0.00 0.00 0.00 0.00 0.00 0.00 30.63 25.60 80.92 75.86 27.92 47.38 25 I4_AR4 ActiveIntronRegion 0 5.11 27.00 2.67 9.76 2.69 6.87 15.72 19.22 4.06 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 1.32 7.45 2.28 1.09 0.14 1.38 26 ER5a ExonRegion 0 3.99 25.38 0.00 4.35 0.00 42.39 25.44 17.85 22.64 0.00 3.87 0.00 0.00 0.00 0.00 0.00 0.00 25.51 40.37 54.30 90.01 18.91 21.91 27 E5_Da NovelBoundary 0 0.00 12.50 0.00 1.60 0.00 11.58 24.60 8.79 16.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.16 25.79 24.99 55.97 5.14 18.78 28 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5b_E6a KnownJunction 0 0.00 9.08 0.00 4.63 0.00 50.37 18.95 14.05 28.50 0.00 5.16 0.00 0.00 0.00 0.00 0.00 0.00 21.64 16.09 47.94 51.71 12.00 19.46 30 ER5b ExonRegion 0 0.50 14.35 0.00 4.09 0.00 38.19 23.36 13.12 26.37 0.00 3.75 0.00 0.00 0.00 0.00 0.00 0.00 18.91 29.98 44.68 65.72 11.40 22.97 31 ER6a ExonRegion 0 0.00 10.72 0.00 4.09 0.00 42.18 23.35 12.10 27.96 0.00 3.87 0.00 0.00 0.00 0.00 0.00 0.00 19.49 30.70 55.51 54.09 10.42 25.36 32 ER6b ExonRegion 0 0.00 12.18 0.00 5.21 1.94 55.48 28.32 22.78 23.91 0.00 3.26 0.00 0.00 0.00 0.00 0.00 0.00 19.92 51.21 49.74 59.19 16.59 37.32 33 E6a_E7a KnownJunction 0 0.00 9.41 0.00 0.00 7.47 54.91 24.20 29.61 33.10 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 13.89 43.86 52.03 53.81 23.45 31.93 34 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E7_Ab NovelBoundary 0 0.00 12.70 0.00 3.86 10.95 58.32 26.67 47.93 34.72 0.00 7.53 0.00 0.00 0.00 0.00 0.00 0.00 20.48 48.57 50.94 57.82 25.04 15.28 36 ER7a ExonRegion 0 0.00 10.43 0.00 1.19 5.35 50.22 18.58 36.86 29.52 0.00 5.24 0.00 0.00 0.00 0.00 0.00 0.00 14.01 45.73 43.58 47.70 21.31 20.37 37 ER7b ExonRegion 0 1.17 12.64 0.00 5.65 2.39 51.42 26.39 35.29 27.81 0.00 4.65 0.00 0.00 1.32 0.00 0.00 0.00 17.78 43.79 58.44 81.45 19.32 30.59 38 E7a_E8a KnownJunction 0 6.82 17.23 0.00 4.86 7.30 42.13 39.92 25.01 34.46 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 28.93 61.27 65.26 87.79 28.96 44.82 39 ER8a ExonRegion 0 2.08 21.36 0.24 4.71 1.80 43.42 27.78 31.32 27.18 0.43 3.34 0.00 0.00 0.00 0.00 0.00 0.00 28.33 40.79 58.22 106.35 20.05 32.86 40 E8a_E9a KnownJunction 0 0.00 30.39 1.83 3.86 3.40 81.71 28.13 25.30 25.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.18 31.06 68.58 126.52 24.68 25.69 41 ER9a ExonRegion 0 2.39 27.32 0.64 1.37 3.27 46.12 32.31 34.98 29.46 0.00 3.57 0.00 0.00 0.00 0.00 0.00 0.00 15.52 29.02 57.50 104.86 18.05 20.48 42 E9a_E10a KnownJunction 0 3.78 51.64 1.42 1.86 0.00 50.26 54.89 46.13 30.03 0.00 5.11 0.00 0.00 0.00 0.00 0.00 0.00 23.92 54.40 86.35 81.86 11.94 16.90 43 ER10a ExonRegion 0 5.00 37.26 2.60 9.13 2.89 83.28 49.44 60.92 45.30 0.64 7.44 0.24 0.54 0.00 0.00 0.00 0.00 29.87 60.58 80.47 115.76 39.87 49.09 44 E10_Da KnownBoundary 0 0.00 11.05 0.00 1.27 0.00 25.16 3.44 11.13 4.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.04 5.94 13.47 9.00 4.35 45 E10a_E10b KnownJunction 0 0.00 2.70 0.00 0.00 0.00 2.33 3.62 0.00 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.10 7.72 12.91 12.66 2.51 0.00 46 ER10b ExonRegion 0 0.30 2.49 0.00 0.36 0.00 13.36 5.05 3.56 2.67 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.64 3.06 7.08 9.71 3.66 2.04 47 E10_Ab KnownBoundary 0 0.00 2.83 0.00 1.53 0.00 18.17 14.53 0.00 3.12 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 8.00 12.05 17.45 20.20 2.82 0.00 48 ER10c ExonRegion 0 6.05 56.57 4.70 16.09 9.42 148.53 57.31 96.76 58.76 0.92 6.96 0.37 0.06 0.03 0.07 0.05 0.11 37.40 68.73 79.51 126.55 44.45 45.93 49 E10b_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E10b_E12a KnownJunction 0 3.78 71.24 4.17 18.81 11.12 158.15 45.36 115.21 67.59 2.07 9.32 0.00 0.00 0.00 0.00 0.00 0.00 59.11 89.04 79.51 176.50 36.01 45.24 51 ER11a ExonRegion 0 0.00 2.26 0.00 0.00 0.00 0.41 0.29 0.19 0.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 1.06 0.00 0.00 0.23 0.00 52 I11_AR1 ActiveIntronRegion 0 0.53 3.30 0.91 1.59 1.34 6.05 6.70 3.31 1.29 0.00 0.87 0.51 0.00 0.00 0.00 0.00 0.00 2.16 4.32 2.26 8.90 11.43 4.53 53 I11_SR2 SilentIntronRegion 0 0.93 3.01 1.37 1.20 0.53 5.61 7.48 6.58 2.36 0.00 0.90 0.00 0.00 0.00 0.00 0.00 0.00 1.37 5.03 1.49 6.65 13.15 6.92 54 E12_Ab NovelBoundary 0 3.41 45.26 0.00 27.04 3.99 39.41 30.30 135.13 59.11 0.00 4.95 0.00 6.17 0.00 0.00 0.00 0.00 48.75 50.26 60.47 134.86 37.84 61.29 55 ER12a ExonRegion 0 2.12 59.07 2.78 21.12 5.47 94.94 35.63 131.21 70.40 0.78 7.56 0.00 1.71 0.00 0.00 0.00 0.00 59.38 73.99 75.34 171.69 43.75 62.74 56 ER12b ExonRegion 0 16.04 181.89 8.26 38.74 20.30 242.95 94.80 159.46 84.98 1.14 8.17 0.00 1.06 0.00 0.14 0.00 0.00 42.34 95.40 77.67 145.87 62.00 70.70 57 E12_Da KnownBoundary 0 27.93 153.59 20.16 38.46 38.03 389.21 154.08 121.62 45.54 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 19.19 60.33 69.99 93.16 25.17 42.68 58 ER12c ExonRegion 0 29.55 198.95 16.45 60.36 39.43 336.56 134.55 220.30 72.85 0.99 6.47 0.33 0.14 0.08 0.08 0.00 0.00 11.87 50.31 51.83 35.66 52.98 28.02 59 IG38_AR4 ActiveIntergenicRegion 0 21.89 19.14 7.90 34.62 24.36 7.72 11.76 13.45 11.09 12.13 1.99 25.05 14.34 3.79 10.15 8.88 3.04 3.64 2.64 7.25 1.22 1.84 3.31 60 IG38_SR5 SilentIntergenicRegion 0 11.17 17.24 5.77 15.98 13.66 5.40 5.66 10.01 7.32 7.00 2.95 22.56 15.79 2.89 5.44 6.15 5.23 0.59 3.03 13.45 0.70 4.89 4.41