Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MTFR1 Gene 0 26.21 26.16 36.02 42.39 34.48 34.27 37.42 23.00 9.40 27.33 64.78 88.91 63.89 55.86 56.38 60.16 52.41 24.12 23.49 38.90 33.96 63.05 37.51 2 262146 Transcript 0 1.46 11.69 0.08 1.79 6.19 8.94 8.52 0.76 0.08 1.43 6.40 0.54 3.81 9.64 9.61 9.47 3.51 5.08 1.39 7.45 11.02 5.34 3.49 3 424808 Transcript 0 2.62 1.84 1.10 1.05 3.94 0.82 6.60 2.65 0.93 0.76 0.86 1.78 0.00 3.95 0.92 3.99 5.39 1.78 0.00 6.31 0.97 0.79 0.00 4 458689 Transcript 0 1.54 3.24 2.06 2.04 1.70 0.58 3.31 2.04 0.00 0.73 1.05 1.97 0.21 1.03 5.41 0.00 2.25 0.00 0.00 3.38 0.40 1.52 2.54 5 ER1a ExonRegion 0 1.46 11.69 0.08 1.79 6.19 8.94 8.52 0.76 0.08 1.43 6.40 0.54 3.81 9.64 9.61 9.47 3.51 5.08 1.39 7.45 11.02 5.34 3.49 6 E1a_E2a KnownJunction 0 70.61 123.86 24.54 29.87 98.81 130.78 122.29 16.22 11.20 24.07 81.97 32.41 19.48 70.81 74.91 150.22 101.64 84.73 32.47 102.14 77.90 117.63 94.58 7 ER1b ExonRegion 0 31.18 65.96 11.89 12.63 44.77 72.68 65.01 8.99 3.58 12.35 45.23 11.69 19.39 56.41 76.59 74.50 48.30 38.13 18.48 53.97 43.56 65.14 40.23 8 ER2a ExonRegion 1 15.37 21.91 31.85 31.10 26.65 26.78 28.95 14.32 7.59 31.84 92.51 16.70 24.32 48.33 46.32 77.01 80.13 39.50 29.50 54.08 57.07 53.96 53.97 9 E2_Da NovelBoundary 0 3.56 9.60 1.83 11.42 12.05 2.73 21.46 7.02 0.00 5.00 0.00 13.35 6.82 0.00 4.45 42.21 8.88 1.99 4.80 12.66 0.00 0.00 4.18 10 E2a_E3a KnownJunction 0 14.08 8.16 36.19 68.86 29.46 10.85 13.16 28.30 15.31 42.28 67.33 20.26 26.95 149.74 115.71 161.41 80.97 86.89 38.87 79.64 46.58 117.57 94.07 11 ER3a ExonRegion 1 19.82 15.61 37.14 45.55 45.70 41.94 9.94 21.60 13.00 31.06 73.27 61.88 71.16 93.54 81.70 169.08 63.62 65.81 35.71 66.09 51.18 105.10 101.77 12 E3_Da NovelBoundary 0 0.00 0.00 0.00 5.99 0.00 19.19 16.21 4.19 1.39 2.69 0.00 6.30 14.77 0.00 4.45 0.00 0.00 1.62 0.00 5.94 0.00 0.00 3.50 13 E3a_E4a KnownJunction 0 24.08 32.10 41.16 23.67 64.60 72.29 31.58 4.31 7.58 24.39 115.08 44.11 79.38 46.27 59.83 61.18 60.31 6.47 13.18 20.65 50.78 50.52 69.49 14 I3_AR3 ActiveIntronRegion 0 1.37 2.33 8.61 2.24 2.20 0.00 5.06 0.00 0.00 0.07 1.93 4.33 18.07 1.43 4.78 0.00 6.60 8.86 6.37 3.50 0.26 4.17 5.87 15 E4_Aa NovelBoundary 0 3.11 0.00 1.12 13.22 4.07 2.21 18.55 3.33 3.24 7.31 2.68 6.30 13.31 0.00 22.25 3.16 0.00 8.87 0.00 2.49 2.59 8.76 3.33 16 E4a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 18.70 42.30 48.20 31.44 45.40 52.63 39.32 9.79 7.33 24.85 100.45 48.63 55.50 56.25 43.71 58.25 76.03 24.82 13.70 26.31 66.63 54.59 50.41 18 ER4b ExonRegion 0 15.60 63.51 43.93 42.20 37.12 47.72 37.22 26.87 7.31 29.35 107.41 75.11 62.66 86.12 64.47 71.95 80.80 48.28 34.22 55.24 81.69 59.11 45.79 19 E4b_E5a KnownJunction 0 39.56 53.08 37.96 47.35 55.86 50.48 39.39 27.31 11.31 36.67 159.15 109.69 48.05 98.89 76.27 131.76 87.70 54.35 40.75 109.49 73.70 108.20 63.42 20 ER5a ExonRegion 0 24.70 25.17 34.84 54.32 17.77 31.94 16.63 24.45 10.96 29.39 99.16 64.39 83.90 94.13 63.35 100.94 93.99 57.39 34.81 57.23 89.94 72.72 59.47 21 E5a_E6a KnownJunction 1 33.34 47.36 34.12 80.08 8.23 31.06 32.42 42.31 14.81 27.78 55.01 74.72 83.44 93.47 19.66 84.00 76.48 47.30 34.73 25.82 62.33 83.03 46.86 22 ER6a ExonRegion 0 40.03 24.17 16.11 35.97 17.68 29.66 21.87 17.01 6.57 16.90 40.90 47.50 76.74 66.59 59.08 61.51 59.66 20.16 28.85 30.77 47.04 73.65 39.92 23 E6_Ab KnownBoundary 0 20.15 15.33 3.90 9.36 19.78 37.59 19.61 0.00 7.09 2.93 23.27 0.00 0.00 47.80 42.90 23.93 3.55 3.69 3.58 0.00 29.28 23.70 11.87 24 ER6b ExonRegion 0 23.88 19.46 18.97 24.72 26.26 33.14 28.70 10.64 9.36 14.70 67.66 43.20 29.83 67.59 46.94 53.65 50.39 27.45 15.59 35.94 50.09 37.99 36.71 25 E6a_E7a KnownJunction 0 38.75 30.78 35.81 48.91 46.26 51.73 43.28 15.36 10.01 25.22 75.49 62.72 19.32 94.94 70.09 96.81 94.06 30.59 26.54 74.27 68.82 55.17 34.66 26 ER7a ExonRegion 0 20.50 18.75 28.47 41.43 44.89 33.16 36.83 19.28 12.69 21.95 100.06 91.38 71.46 102.41 74.90 98.33 86.35 48.18 30.16 56.19 62.36 63.33 58.02 27 E7_Da KnownBoundary 0 3.19 0.00 2.84 6.99 15.03 0.00 3.40 6.00 3.50 0.00 0.00 5.55 0.00 7.42 0.00 0.00 8.88 3.52 0.00 12.14 0.00 2.39 0.00 28 E7a_E8a KnownJunction 0 7.04 37.69 25.13 45.15 54.33 30.55 54.28 24.77 13.40 25.57 91.18 65.87 53.57 95.06 67.50 87.24 69.19 53.27 24.66 35.54 55.48 51.86 70.00 29 ER7b ExonRegion 0 2.62 1.84 1.10 1.05 3.94 0.82 6.60 2.65 0.93 0.76 0.86 1.78 0.00 3.95 0.92 3.99 5.39 1.78 0.00 6.31 0.97 0.79 0.00 30 ER8a ExonRegion 0 30.87 27.95 43.03 48.28 39.71 36.38 46.97 27.87 9.92 31.42 56.48 118.47 73.33 44.59 57.86 46.34 41.50 12.68 22.20 33.83 16.35 67.99 28.98 31 ER8b ExonRegion 0 3.08 6.47 4.12 4.09 3.41 1.17 6.62 4.09 0.00 1.46 2.11 3.94 0.43 2.07 10.81 0.00 4.50 0.00 0.00 6.77 0.80 3.03 5.07 32 IG12 Intergenic 0 34.11 10.09 4.74 8.07 20.85 7.39 11.30 7.60 2.29 6.11 4.00 10.33 12.21 3.52 3.54 5.17 8.19 3.90 3.18 10.45 1.45 2.13 3.35 33 IG12_AR2 ActiveIntergenicRegion 0 13.72 6.23 1.53 5.96 6.13 3.81 4.21 5.68 0.51 1.69 0.54 7.45 9.33 3.03 1.70 6.27 6.93 2.14 3.05 6.49 2.78 1.17 0.00 34 IG12_AR3 ActiveIntergenicRegion 0 7.77 1.86 1.16 6.69 7.38 3.09 5.25 2.45 0.58 0.78 0.00 6.62 15.29 1.71 3.50 9.69 0.47 1.06 1.56 6.70 1.71 0.62 1.86 35 IG12_SR3 SilentIntergenicRegion 0 95.80 15.58 3.49 2.59 34.12 5.85 9.28 3.24 2.35 1.09 2.46 15.59 14.77 10.29 2.61 9.47 8.42 1.76 8.12 4.07 4.21 0.00 0.00 36 IG12_AR6 ActiveIntergenicRegion 0 177.00 34.35 16.57 19.93 98.89 15.87 25.30 27.74 6.03 22.01 6.73 16.94 28.23 5.98 8.36 6.59 13.24 3.40 3.70 16.18 0.70 2.42 2.79 37 IG12_SR4 SilentIntergenicRegion 0 72.86 18.54 7.79 11.26 23.08 10.68 13.20 9.24 4.33 9.10 9.65 14.46 6.06 5.78 8.57 12.65 17.84 15.39 12.05 18.65 2.73 2.44 2.47 38 IG12_AR7 ActiveIntergenicRegion 0 35.43 21.54 6.15 14.81 33.33 21.89 25.77 10.09 5.33 14.19 9.53 24.34 20.59 6.47 5.26 8.97 17.28 9.28 7.04 23.32 1.65 2.56 4.66