Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STAU2 Gene 0 41.51 114.73 61.36 79.00 83.81 212.82 88.42 63.41 74.21 91.18 116.66 120.10 143.99 149.31 83.02 80.61 116.81 86.18 72.96 124.91 20.97 35.07 23.82 2 343268 Transcript 1 17.05 42.82 8.03 6.66 19.77 143.75 67.82 6.05 9.06 9.43 42.09 0.00 0.00 70.47 29.98 62.58 44.01 31.51 41.23 49.17 9.43 10.42 24.15 3 355780 Transcript 0 42.04 101.61 66.83 86.83 80.04 143.17 94.69 63.92 52.53 87.04 76.23 121.22 142.70 98.86 85.39 46.05 74.14 41.34 38.51 105.97 5.09 26.64 12.68 4 418363 Transcript 1 16.07 30.80 11.04 10.16 24.57 52.57 20.20 14.37 11.35 24.79 40.80 78.68 51.44 69.45 10.19 43.77 43.20 16.04 39.49 39.55 15.29 6.66 16.49 5 ER1a ExonRegion 1 17.05 42.82 8.03 6.66 19.77 143.75 67.82 6.05 9.06 9.43 42.09 0.00 0.00 70.47 29.98 62.58 44.01 31.51 41.23 49.17 9.43 10.42 24.15 6 ER1b ExonRegion 1 112.86 163.75 39.18 22.18 154.73 723.16 276.74 53.75 58.91 58.72 244.85 6.93 0.00 376.88 84.14 295.65 243.52 179.46 151.07 212.23 43.08 67.09 59.25 7 E1_Da NovelBoundary 0 0.00 0.00 8.90 3.80 0.00 5.28 5.39 6.82 3.56 4.84 6.84 5.85 0.00 7.95 9.64 27.60 17.30 23.75 29.08 2.75 0.00 0.00 18.61 8 E1a_E2a KnownJunction 1 155.43 197.53 67.38 39.42 213.92 857.01 334.80 91.27 97.54 96.65 295.07 29.71 0.00 161.11 34.61 334.87 271.53 262.19 154.45 234.00 49.17 89.46 46.18 9 E1a_E3a NovelJunction 0 23.93 13.22 1.83 3.90 18.25 61.50 2.08 10.10 10.50 5.00 33.59 0.00 0.00 29.96 9.64 42.98 17.30 36.48 18.45 13.87 7.97 8.45 22.02 10 E1a_E5a NovelJunction 0 10.52 20.13 0.00 15.05 0.00 63.32 17.58 6.57 22.37 11.04 16.00 0.00 0.00 7.18 0.00 27.00 21.13 32.46 6.96 11.51 8.09 0.00 0.00 11 I1 Intron 0 7.73 10.19 7.61 18.87 14.25 10.91 17.88 9.35 7.42 7.04 1.94 7.11 11.80 2.69 7.71 8.35 6.18 5.23 6.74 11.52 1.42 0.65 2.36 12 I1_SR1 SilentIntronRegion 0 10.73 12.01 10.06 24.56 19.54 15.08 23.57 12.74 9.40 9.00 2.62 9.48 18.17 3.50 10.34 9.25 6.33 6.06 8.01 13.93 1.58 0.83 2.81 13 E2_Aa NovelBoundary 1 45.71 11.71 12.12 40.75 11.38 25.10 19.25 27.23 14.81 8.30 4.79 12.45 33.44 7.24 8.90 43.92 8.13 8.54 20.05 33.68 4.76 0.00 4.35 14 ER2a ExonRegion 0 38.83 46.83 54.78 43.20 58.06 155.16 59.91 59.73 65.23 81.92 165.24 69.50 66.20 100.59 45.88 102.53 184.73 139.87 71.83 130.69 31.48 26.31 22.66 15 E2_Da NovelBoundary 0 6.52 19.21 20.99 34.23 20.29 0.00 19.78 15.48 10.24 7.60 2.68 26.56 21.75 0.00 6.30 4.02 4.30 10.94 12.52 16.55 0.00 4.59 8.37 16 E2a_E3a KnownJunction 1 10.59 48.48 85.07 46.58 29.71 88.02 36.04 83.26 95.54 127.43 362.46 171.66 84.25 229.80 121.89 177.99 402.06 190.73 153.89 291.65 69.81 31.90 46.01 17 I2 Intron 0 3.56 8.88 4.10 18.23 5.00 3.66 9.58 4.98 4.59 4.80 1.08 5.30 17.08 2.10 7.37 2.41 4.53 3.61 4.37 10.48 0.55 0.00 2.01 18 I2_SR1 SilentIntronRegion 0 1.76 5.74 3.99 17.95 4.09 3.56 8.92 5.31 4.55 4.60 0.55 4.93 13.78 1.77 6.92 2.32 4.02 2.82 3.30 8.78 0.63 0.00 1.96 19 I2_AR1 ActiveIntronRegion 0 4.34 29.10 5.56 24.09 0.37 5.09 26.64 7.66 5.83 10.28 2.03 5.82 18.11 1.85 13.01 2.20 3.59 1.53 3.68 15.15 0.61 0.00 1.27 20 I2_SR2 SilentIntronRegion 0 7.73 11.25 4.02 17.61 8.47 3.57 6.85 3.53 4.41 3.87 2.12 6.14 24.94 2.97 7.09 2.72 6.04 6.08 7.11 13.43 0.35 0.00 2.36 21 E3_Aa NovelBoundary 1 10.37 24.14 11.35 31.83 3.74 5.00 17.80 11.87 3.18 11.20 0.00 12.30 74.67 13.83 10.38 0.00 17.11 6.47 24.66 27.74 0.00 0.00 11.35 22 ER3a ExonRegion 0 15.75 39.72 56.61 48.44 50.80 75.16 41.28 83.12 100.92 107.97 250.52 158.16 93.30 359.35 103.74 236.10 235.01 237.69 173.46 251.93 40.27 60.20 40.31 23 E3a_E5a KnownJunction 1 5.78 50.39 40.57 57.30 57.72 98.69 58.25 88.31 89.64 89.72 159.51 161.45 101.94 158.87 28.93 188.84 94.06 254.19 131.58 153.59 30.83 26.70 44.05 24 I3_SR1 SilentIntronRegion 0 10.22 7.77 7.74 17.17 11.68 4.99 12.20 8.30 5.79 3.94 0.86 2.99 6.16 2.89 7.68 8.67 8.69 5.63 4.43 16.47 1.30 0.44 1.23 25 I3_SR2 SilentIntronRegion 0 4.83 10.63 4.96 18.77 8.57 7.61 12.99 7.74 5.95 5.08 3.30 6.79 16.11 1.50 8.50 7.56 6.05 5.17 7.10 14.25 0.00 0.00 2.33 26 I3_AR2 ActiveIntronRegion 0 16.16 18.84 7.02 29.65 8.70 10.22 27.02 7.28 7.54 7.86 4.99 13.98 35.86 1.56 11.84 18.60 19.23 10.71 16.94 20.39 0.55 0.00 2.86 27 I3_AR3 ActiveIntronRegion 0 11.00 12.33 9.26 23.63 8.61 5.22 16.06 13.07 5.48 8.47 3.11 10.91 18.89 2.63 11.32 11.41 8.58 8.76 12.62 21.34 0.82 0.77 4.36 28 E4_Aa NovelBoundary 0 7.33 23.02 9.14 8.19 6.28 19.93 13.56 16.22 8.04 21.38 11.79 36.61 27.11 46.56 13.35 60.24 48.53 20.77 16.94 28.19 8.40 7.16 0.00 29 ER4a ExonRegion 0 10.43 19.05 9.96 5.93 21.97 70.28 21.86 10.96 12.34 21.34 42.90 63.57 42.00 57.07 20.39 36.11 55.07 16.74 36.99 40.05 7.60 10.56 14.63 30 E4a_E5a KnownJunction 1 21.71 42.56 12.12 14.38 27.16 34.87 18.55 17.79 10.36 28.23 38.69 93.78 60.87 81.82 0.00 51.44 31.32 15.34 41.98 39.05 22.98 2.76 18.35 31 ER5a ExonRegion 0 48.60 132.65 65.09 80.96 129.71 431.62 176.32 85.72 108.72 129.54 223.29 196.26 145.04 279.87 93.24 160.79 240.57 261.93 125.62 212.10 66.48 45.67 60.68 32 E5a_E6a KnownJunction 1 48.97 148.79 63.84 65.93 70.46 254.29 76.22 65.88 94.65 111.21 210.32 284.94 131.00 357.64 68.98 184.31 233.66 237.11 100.71 218.21 59.24 67.66 57.96 33 ER6a ExonRegion 0 83.26 118.20 60.84 78.40 74.02 274.91 97.54 87.57 117.90 138.83 235.16 191.58 148.29 333.91 102.93 175.09 260.38 256.76 151.73 223.83 68.98 62.70 55.06 34 E6a_E7a KnownJunction 0 82.38 163.92 76.19 69.12 53.31 287.73 100.29 90.08 152.28 162.43 251.27 145.40 112.98 337.10 156.99 168.16 278.35 206.69 126.50 236.11 63.07 63.44 65.81 35 ER7a ExonRegion 0 71.91 213.75 84.05 92.05 89.40 335.01 116.38 92.79 150.66 164.12 263.22 182.24 192.58 334.99 129.89 186.69 291.94 233.79 156.58 243.70 47.09 65.15 55.12 36 E7a_E8a KnownJunction 0 20.37 229.37 81.16 90.83 133.79 538.44 202.40 80.42 170.08 148.47 210.95 223.72 274.01 280.59 78.62 153.38 331.84 229.32 124.62 263.34 37.44 65.15 50.28 37 ER8a ExonRegion 0 38.39 166.92 107.11 113.80 140.28 386.98 102.69 98.35 162.46 159.87 308.51 245.54 251.39 326.31 124.06 234.91 263.89 254.22 132.66 264.54 47.11 75.57 59.03 38 E8a_E9a KnownJunction 0 40.08 187.60 106.47 138.81 187.52 347.07 125.73 151.19 197.94 200.66 221.00 287.04 191.38 493.79 162.93 342.65 211.31 226.46 300.06 292.10 24.71 111.02 108.84 39 ER9a ExonRegion 0 76.69 208.93 102.49 128.21 115.09 423.44 135.60 115.95 161.13 209.18 276.87 239.58 286.18 395.93 112.29 222.14 304.69 219.12 140.19 286.03 65.30 77.40 66.36 40 E9a_E10a KnownJunction 1 99.50 226.47 64.04 86.44 140.49 442.42 134.17 52.66 104.51 115.80 207.84 207.22 286.67 410.27 106.31 169.96 217.39 176.22 148.24 190.15 81.18 54.68 52.41 41 ER10a ExonRegion 0 53.48 189.02 69.01 73.50 112.25 396.25 130.09 74.01 112.28 143.67 194.69 191.00 285.38 355.47 97.11 144.99 211.90 196.32 134.99 179.86 67.15 54.85 41.41 42 E10a_E11a KnownJunction 0 34.75 271.79 107.48 118.53 140.15 609.54 156.73 77.34 146.01 172.67 240.80 161.15 340.40 384.60 123.74 162.35 286.30 247.48 197.18 226.91 85.25 66.07 36.02 43 ER11a ExonRegion 0 43.08 176.07 87.79 126.49 163.81 440.26 132.27 108.38 141.56 175.87 262.43 246.55 392.54 399.89 139.33 238.49 264.65 247.44 205.53 251.93 80.97 93.35 69.95 44 E11a_E12a KnownJunction 0 42.16 125.96 120.31 144.14 143.63 432.88 118.31 143.35 162.01 184.81 244.01 236.33 372.70 467.54 205.58 258.31 317.91 240.64 330.17 255.03 85.99 157.68 80.67 45 ER12a ExonRegion 1 43.27 121.48 78.22 161.83 117.34 305.07 102.94 132.13 146.05 193.98 335.34 180.56 435.79 415.43 148.49 219.16 338.53 243.02 281.93 230.48 82.98 115.79 67.45 46 E12a_E13a KnownJunction 1 32.38 197.93 45.77 158.25 126.99 312.94 105.99 143.18 154.45 211.11 380.15 196.56 536.17 275.12 103.84 168.16 418.33 217.01 196.71 266.79 96.37 89.83 39.52 47 ER13a ExonRegion 0 63.76 234.68 74.77 135.12 154.93 430.87 153.40 88.75 131.30 141.98 244.08 241.33 358.04 281.34 135.51 157.94 253.04 140.33 186.35 208.50 43.14 65.29 52.54 48 E13_Da KnownBoundary 0 44.82 143.13 61.41 111.77 128.95 289.83 216.93 64.98 93.84 105.92 152.25 217.72 278.72 186.77 67.99 69.64 161.38 43.24 78.03 245.63 37.25 39.19 22.11 49 E13a_E14a KnownJunction 0 9.85 88.34 44.20 48.78 97.03 189.89 29.72 24.89 46.59 55.74 44.91 13.95 40.26 21.84 25.34 8.12 44.32 37.23 41.70 30.42 19.21 2.45 7.34 50 ER13b ExonRegion 0 42.04 101.61 66.83 86.83 80.04 143.17 94.69 63.92 52.53 87.04 76.23 121.22 142.70 98.86 85.39 46.05 74.14 41.34 38.51 105.97 5.09 26.64 12.68 51 E13_Db NovelBoundary 0 10.30 6.25 8.78 37.42 26.99 9.48 20.31 15.85 4.95 30.97 14.48 25.21 26.95 9.36 0.00 11.28 13.37 1.58 0.00 22.18 0.00 0.00 0.00 52 I13_AR2 ActiveIntronRegion 0 6.28 25.57 9.57 21.51 20.04 18.66 23.00 9.28 9.54 15.52 4.52 18.31 18.22 6.47 7.74 2.97 6.59 3.53 4.52 19.23 0.47 2.56 1.04 53 I13_SR2 SilentIntronRegion 0 9.70 31.67 6.68 13.89 15.34 15.20 17.29 8.88 6.75 11.37 2.97 7.50 5.65 4.32 4.63 2.21 3.58 3.19 1.60 9.42 0.00 2.33 2.81 54 I13_AR3 ActiveIntronRegion 0 28.75 37.41 14.30 41.65 24.63 25.24 22.82 20.95 13.20 19.58 4.21 12.33 13.77 3.36 12.61 7.74 6.64 7.63 6.75 16.93 1.45 1.30 2.55 55 I13_SR3 SilentIntronRegion 0 18.78 17.78 5.81 19.65 20.85 24.56 13.13 9.15 7.14 14.09 0.32 2.09 4.14 3.36 6.07 5.47 4.21 1.74 5.28 6.22 0.00 0.00 1.25 56 I13_AR4 ActiveIntronRegion 0 22.81 34.15 15.56 30.65 31.02 28.46 23.68 15.00 14.07 9.01 2.31 5.66 8.04 4.26 16.07 10.68 8.97 11.93 9.51 15.39 2.11 0.95 3.07 57 I13_AR8 ActiveIntronRegion 0 23.03 14.19 5.39 18.69 18.18 36.25 14.78 15.49 12.02 13.91 22.18 27.06 23.22 34.09 24.96 20.13 20.74 7.17 3.12 7.48 4.71 8.11 4.21 58 I13_SR9 SilentIntronRegion 0 10.20 17.35 7.63 18.76 9.54 4.82 6.47 5.47 5.21 5.02 1.60 4.43 5.17 1.54 3.25 3.40 3.64 2.17 3.25 4.60 0.66 0.28 0.76 59 I13_AR14 ActiveIntronRegion 0 2.05 1.61 0.00 1.20 8.27 2.79 1.94 0.00 2.56 0.92 0.38 5.17 3.64 0.68 0.00 0.00 0.00 1.16 4.47 2.10 1.18 1.87 10.26 60 ER14a ExonRegion 0 30.75 112.24 39.20 43.61 83.46 269.34 49.94 22.43 57.97 39.91 43.91 22.62 36.04 42.79 43.39 13.69 32.79 28.67 48.39 53.07 11.84 13.53 6.50 61 E14a_E15a KnownJunction 0 27.41 152.01 28.03 55.67 97.88 353.15 70.40 19.80 54.14 41.15 51.22 5.85 20.29 68.75 43.76 12.39 21.69 17.00 90.26 33.81 3.15 9.25 15.02 62 ER15a ExonRegion 1 18.77 72.69 33.93 40.44 48.55 140.14 25.54 29.59 50.31 25.34 25.24 13.92 14.42 20.91 43.35 9.05 13.09 11.24 30.12 31.76 4.77 12.37 4.60