Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FBXO16 Gene 0 30.12 47.69 49.41 43.39 74.12 99.59 42.70 48.09 55.32 41.76 3.30 85.68 32.89 16.32 70.67 89.10 6.76 33.50 59.11 51.02 3.76 2.29 6.02 2 380254 Transcript 0 25.90 21.39 11.72 10.25 33.94 40.39 22.05 9.53 13.59 12.98 0.97 6.91 3.40 2.83 29.01 40.58 1.23 15.01 26.99 18.63 0.89 0.69 2.03 3 346498 Transcript 0 253.82 162.87 90.18 59.93 320.12 315.22 192.81 73.07 108.10 93.24 7.74 37.21 6.49 14.83 162.19 274.71 4.39 92.28 188.62 136.72 5.68 6.00 12.38 4 ER1a ExonRegion 0 4.68 6.22 1.46 3.49 0.15 8.39 3.26 0.93 0.02 1.08 0.00 5.58 3.16 1.19 18.86 14.75 0.38 2.52 9.31 3.76 0.47 0.00 1.69 5 E1_Ab KnownBoundary 0 16.37 20.00 6.42 13.22 4.07 44.12 15.90 3.57 0.00 2.55 0.00 30.61 13.64 7.06 50.93 62.72 0.00 9.58 30.21 17.13 0.00 0.00 3.59 6 ER1b ExonRegion 0 81.89 93.80 33.52 37.99 81.30 149.76 74.57 25.99 33.53 33.43 1.38 19.14 9.55 14.04 87.50 130.66 10.64 44.39 98.00 69.92 6.94 2.42 11.67 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2b KnownJunction 0 253.82 162.87 90.18 59.93 320.12 315.22 192.81 73.07 108.10 93.24 7.74 37.21 6.49 14.83 162.19 274.71 4.39 92.28 188.62 136.72 5.68 6.00 12.38 9 ER2a ExonRegion 0 73.02 57.96 33.70 27.26 101.68 112.78 62.89 27.66 40.76 37.85 2.90 15.15 7.04 7.31 68.18 107.00 3.30 42.50 71.67 52.13 2.20 2.08 4.40 10 ER2b ExonRegion 0 38.97 24.28 51.71 44.89 55.20 64.49 36.18 50.53 56.56 55.41 2.83 61.07 16.50 12.22 50.57 86.53 8.66 41.88 76.17 62.50 6.19 2.05 6.34 11 E2_Da NovelBoundary 0 0.00 0.00 5.12 8.12 0.00 0.00 0.00 6.45 3.82 2.15 0.00 51.17 6.33 0.00 0.00 7.18 0.00 0.00 8.38 17.96 0.00 0.00 0.00 12 E2a_E3a KnownJunction 1 15.11 12.70 53.84 36.73 8.49 9.94 8.57 51.51 51.42 37.79 5.37 77.58 0.00 14.24 77.63 105.27 8.13 15.84 65.41 81.11 3.15 6.18 12.29 13 E2a_E4a NovelJunction 0 9.71 2.96 12.63 7.26 0.00 0.00 4.20 13.97 11.55 9.89 0.00 11.55 0.00 0.00 9.64 15.47 0.00 6.67 13.18 17.39 2.72 0.00 0.00 14 ER3a ExonRegion 0 20.34 17.91 55.41 46.00 16.05 44.62 11.33 68.85 63.33 53.84 3.92 57.61 8.99 14.89 90.74 103.61 6.42 39.06 86.98 92.08 1.47 3.59 18.84 15 E3a_E4a KnownJunction 0 28.45 31.38 42.58 42.45 42.11 74.28 14.79 60.99 54.25 54.29 5.21 76.07 8.28 22.37 117.07 113.82 8.23 59.69 93.18 103.74 0.00 2.63 20.06 16 ER4a ExonRegion 0 27.78 81.87 49.28 42.35 83.90 157.43 63.32 64.67 67.05 55.08 4.30 110.56 37.07 16.95 81.68 117.06 8.53 62.79 67.17 64.67 3.50 3.44 7.09 17 E4_Da NovelBoundary 0 28.45 28.09 28.33 41.25 37.35 37.99 10.02 25.51 42.22 17.19 0.00 28.96 8.28 5.47 29.54 28.45 0.00 16.21 21.46 61.23 0.00 3.12 8.28 18 E4a_E5a KnownJunction 0 61.34 125.57 45.03 55.87 48.22 170.07 57.99 53.77 56.13 53.13 2.37 143.90 40.09 19.54 93.83 99.46 0.00 32.21 48.66 47.94 11.37 0.00 0.00 19 I4 Intron 0 5.29 16.63 13.37 13.22 26.70 12.22 9.01 11.53 12.77 6.49 0.11 17.90 5.82 0.83 7.76 7.54 0.38 4.42 6.17 11.83 0.43 0.44 1.19 20 I4_AR1 ActiveIntronRegion 0 8.30 16.16 16.25 18.07 34.31 14.21 11.78 16.51 16.55 8.83 0.00 31.09 10.82 1.84 14.19 6.83 0.32 7.13 9.45 16.49 0.00 0.00 2.53 21 I4_AR2 ActiveIntronRegion 0 6.06 17.79 16.26 18.39 47.20 14.66 15.78 22.93 18.89 9.03 0.00 12.49 11.24 0.40 6.05 6.73 0.00 1.39 4.81 9.63 0.00 0.63 1.33 22 I4_SR3 SilentIntronRegion 0 4.45 17.43 12.59 11.34 21.55 11.75 7.23 8.25 11.00 5.58 0.18 15.43 3.43 0.65 6.27 8.34 0.50 4.40 5.73 11.42 0.67 0.57 0.81 23 E5_Aa NovelBoundary 0 6.45 12.70 15.49 6.86 21.31 20.67 11.31 17.25 25.14 4.16 0.00 18.91 12.66 2.47 9.27 20.34 0.00 8.79 17.32 20.96 2.97 0.00 3.84 24 ER5a ExonRegion 0 38.16 52.03 52.82 49.25 94.66 129.74 51.15 55.49 69.35 57.41 4.02 123.82 55.11 21.69 91.57 117.89 6.06 48.75 59.77 53.76 6.72 4.32 4.43 25 E5_Da NovelBoundary 0 0.00 9.67 9.64 12.25 18.85 16.87 10.73 25.42 10.01 5.64 0.00 5.55 8.28 2.47 31.03 23.50 0.00 9.16 13.08 24.16 0.00 2.88 4.35 26 E5a_E6a KnownJunction 0 70.23 30.98 55.94 62.16 83.62 126.80 62.18 55.70 83.13 57.81 2.53 220.87 106.97 21.07 138.20 141.93 0.00 16.95 99.20 69.48 3.03 4.71 3.16 27 E6_Aa NovelBoundary 0 17.11 19.01 38.23 21.88 136.76 94.15 56.00 29.12 43.89 9.72 0.00 37.36 19.80 0.00 33.99 28.03 0.00 32.46 56.47 44.55 3.03 0.00 0.00 28 ER6a ExonRegion 0 38.12 63.38 88.05 74.80 113.71 135.93 57.65 75.64 97.47 58.30 4.05 158.11 65.16 30.33 104.26 133.12 7.61 28.90 85.87 69.41 4.16 2.73 7.11 29 E6a_E7a KnownJunction 0 86.31 161.94 97.99 82.01 261.71 319.36 132.49 93.53 96.61 62.83 12.32 98.88 19.97 40.85 58.47 196.36 4.68 45.14 146.07 112.30 6.30 2.88 8.71 30 E7_Aa NovelBoundary 0 28.60 11.91 22.12 36.93 12.39 23.91 17.05 26.21 17.39 24.42 0.00 20.26 6.98 0.00 4.45 7.52 0.00 2.40 3.86 17.45 0.00 0.00 0.00 31 ER7a ExonRegion 0 24.72 60.71 54.21 49.00 110.51 127.01 62.03 46.45 55.80 29.67 4.58 112.06 45.90 23.70 68.05 85.44 12.31 23.32 56.87 52.55 2.25 1.36 4.28 32 E7_Da NovelBoundary 0 18.30 24.93 52.78 40.35 34.63 54.06 38.47 22.96 37.07 17.73 2.68 43.21 0.00 4.77 4.45 4.10 0.00 2.11 22.97 20.33 2.35 0.00 0.00 33 E7a_E8a KnownJunction 0 6.82 30.32 16.03 17.15 15.79 38.44 2.25 21.93 20.23 11.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.68 0.00 5.31 0.00 0.00 0.00 34 E7a_E9a NovelJunction 0 24.30 9.67 10.56 9.59 16.55 23.05 4.20 18.11 8.07 9.54 5.05 60.47 13.64 12.07 88.76 90.92 8.13 4.73 40.38 3.26 8.71 3.12 0.00 35 I7 Intron 0 6.82 22.17 18.53 21.44 22.72 23.71 14.42 17.39 22.63 15.59 0.30 17.56 7.32 1.66 12.43 18.29 1.04 13.62 21.01 20.78 0.95 0.33 1.59 36 I7_AR1 ActiveIntronRegion 1 0.00 6.84 3.07 7.97 16.50 11.28 3.71 10.10 9.28 5.75 0.00 41.25 6.65 1.50 5.07 16.66 1.85 2.07 7.21 11.92 0.00 0.00 0.00 37 I7_AR2 ActiveIntronRegion 0 15.80 30.85 38.58 35.47 36.23 27.15 23.96 30.64 32.84 24.43 0.00 18.76 9.25 2.44 13.50 17.68 0.00 9.43 15.32 22.89 0.84 0.26 0.74 38 I7_SR2 SilentIntronRegion 0 16.42 26.17 41.29 41.85 30.52 15.07 17.11 22.57 30.14 19.39 0.59 17.01 19.74 1.25 19.53 22.40 0.00 19.23 30.17 30.26 2.22 0.63 1.89 39 I7_AR3 ActiveIntronRegion 0 14.83 43.12 38.15 45.57 42.78 29.95 24.64 41.70 46.60 25.17 0.31 29.34 10.59 1.57 19.38 22.67 1.32 18.12 29.30 26.47 1.01 0.17 1.85 40 I7_SR3 SilentIntronRegion 0 5.40 20.33 15.05 17.65 20.65 22.50 13.22 14.68 20.32 14.11 0.29 16.69 6.82 1.65 11.76 17.81 1.03 12.89 20.36 19.79 0.80 0.36 1.56 41 I7_AR4 ActiveIntronRegion 0 7.60 20.76 22.04 29.33 18.87 37.64 14.77 16.45 20.35 20.29 0.67 11.85 5.33 1.41 12.78 20.18 2.00 23.24 25.59 25.83 2.10 0.18 2.80 42 ER8a ExonRegion 0 7.16 14.16 12.11 14.68 17.70 32.02 6.01 22.07 17.15 10.72 0.00 1.17 0.00 0.94 2.79 0.69 0.00 12.93 6.49 10.72 0.00 0.00 0.00 43 I8 Intron 0 4.65 15.64 13.47 13.06 16.38 15.83 15.99 9.70 12.42 10.46 0.00 18.14 3.55 1.51 8.38 21.92 0.52 4.18 18.99 13.36 0.00 0.66 0.92 44 I8_AR2 ActiveIntronRegion 0 4.23 4.58 3.68 1.36 14.38 7.34 12.74 5.19 7.41 9.18 0.00 3.79 0.00 0.00 6.89 5.94 0.00 1.85 22.30 13.83 0.00 0.00 0.00 45 I8_AR3 ActiveIntronRegion 0 4.23 10.93 3.68 1.36 17.06 18.22 15.14 5.19 7.41 9.18 0.00 4.33 0.00 2.84 13.06 7.62 0.00 1.85 28.07 17.69 0.00 0.00 0.00 46 I8_AR4 ActiveIntronRegion 0 2.59 12.20 3.68 1.36 17.54 23.23 15.59 5.19 7.41 9.18 0.00 6.73 0.00 3.25 14.83 6.60 0.00 1.85 28.67 14.89 0.00 0.00 0.00 47 I8_AR5 ActiveIntronRegion 0 0.00 11.28 3.68 1.36 12.41 19.00 12.64 5.19 7.41 9.18 0.00 7.08 0.00 3.25 12.92 5.94 0.00 1.85 15.93 7.16 0.00 0.00 0.00 48 I8_AR9 ActiveIntronRegion 0 6.11 20.16 19.95 22.76 19.41 20.94 18.33 13.25 20.07 12.96 0.00 31.48 5.76 2.52 8.40 30.16 1.48 6.14 28.86 21.28 0.00 1.88 2.63 49 E9_Aa NovelBoundary 0 17.63 18.62 25.66 20.21 37.69 35.55 17.44 30.27 17.42 25.20 0.00 18.61 0.00 0.00 32.02 49.39 0.00 11.15 22.40 20.01 0.00 0.00 4.35 50 ER9a ExonRegion 0 14.21 17.62 31.76 26.08 44.99 38.51 15.39 26.64 26.44 22.29 2.73 38.53 13.46 6.68 44.14 34.05 3.63 13.92 28.51 24.77 2.07 0.98 4.15 51 IG24 Intergenic 0 4.31 8.16 23.99 16.20 22.49 18.69 8.81 17.13 25.38 13.64 0.37 3.91 2.42 1.27 5.57 7.06 0.29 12.52 20.81 15.79 0.46 0.34 1.26 52 IG24_SR1 SilentIntergenicRegion 0 4.31 8.17 24.03 16.23 22.53 18.71 8.82 17.16 25.42 13.66 0.37 3.92 2.42 1.27 5.58 7.07 0.29 12.54 20.84 15.81 0.46 0.34 1.26