Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TM2D2 Gene 0 83.93 75.94 71.72 51.78 66.72 73.44 41.51 56.57 69.74 54.70 52.58 46.25 44.95 56.77 71.76 48.63 38.15 25.77 35.11 39.55 63.05 103.52 66.56 2 456397 Transcript 0 20.74 36.84 39.71 43.48 59.25 89.04 18.15 30.35 48.32 48.92 25.32 12.60 15.10 101.36 101.49 58.19 55.54 50.08 56.75 33.81 126.83 162.76 105.51 3 397070 Transcript 0 13.11 9.14 16.79 8.39 13.67 39.92 7.82 8.58 10.04 1.45 13.95 0.00 12.50 5.12 4.45 31.10 9.54 5.76 24.85 0.00 2.90 16.84 23.90 4 412303 Transcript 0 0.00 0.00 16.44 4.36 6.62 2.21 1.72 7.80 5.35 6.72 2.26 0.00 0.00 10.12 0.00 4.36 12.90 2.11 0.00 0.00 0.00 2.39 3.33 5 456845 Transcript 0 0.00 0.00 5.94 0.00 0.00 2.61 0.00 0.00 2.58 1.34 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 316221 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 1 128.42 44.07 52.95 31.49 40.70 159.80 50.40 32.23 46.57 41.83 89.32 1.96 22.95 62.09 102.69 186.79 66.27 107.03 106.37 65.61 127.41 144.24 272.57 8 E1_Da KnownBoundary 1 97.80 5.92 74.81 50.01 24.28 57.24 20.89 59.60 84.23 73.95 26.74 18.76 35.55 14.36 50.81 50.07 8.04 132.28 58.92 21.16 29.84 34.11 60.95 9 E1a_E2a KnownJunction 0 0.00 0.00 16.44 4.36 6.62 2.21 1.72 7.80 5.35 6.72 2.26 0.00 0.00 10.12 0.00 4.36 12.90 2.11 0.00 0.00 0.00 2.39 3.33 10 E1a_E2b KnownJunction 0 0.00 0.00 5.94 0.00 0.00 2.61 0.00 0.00 2.58 1.34 0.00 0.00 0.00 0.00 0.00 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E2d NovelJunction 0 0.00 0.00 14.13 6.79 4.16 7.84 1.72 16.72 6.54 12.44 0.00 0.00 13.15 2.47 0.00 0.00 0.00 3.90 0.00 2.56 0.00 0.00 3.84 12 ER1b ExonRegion 0 17.17 13.40 54.39 34.42 11.95 25.49 8.54 36.25 50.29 43.60 37.07 9.58 22.40 54.91 76.63 96.42 44.75 50.35 62.02 41.05 88.29 105.89 159.29 13 E1b_E2a KnownJunction 0 13.11 9.14 16.79 8.39 13.67 39.92 7.82 8.58 10.04 1.45 13.95 0.00 12.50 5.12 4.45 31.10 9.54 5.76 24.85 0.00 2.90 16.84 23.90 14 E1b_E2d KnownJunction 0 20.74 36.84 39.71 43.48 59.25 89.04 18.15 30.35 48.32 48.92 25.32 12.60 15.10 101.36 101.49 58.19 55.54 50.08 56.75 33.81 126.83 162.76 105.51 15 ER2a ExonRegion 0 17.55 19.98 32.41 8.98 26.18 98.23 25.05 23.54 13.16 13.95 34.62 14.64 18.16 18.02 9.76 37.06 23.24 13.44 6.93 9.53 18.10 18.12 18.80 16 E2_Ab KnownBoundary 0 19.34 28.48 69.19 15.88 49.15 49.91 22.39 34.83 21.99 19.53 44.54 24.91 28.73 24.60 14.83 47.34 28.42 13.43 4.14 13.87 32.93 20.70 19.38 17 ER2b ExonRegion 0 33.52 28.44 57.86 18.41 30.81 50.77 23.27 27.21 34.02 24.60 42.50 24.43 28.88 34.83 29.53 65.98 31.91 18.98 15.37 21.32 20.87 37.14 32.80 18 E2_Ac KnownBoundary 0 48.82 37.36 51.68 19.21 42.87 99.83 45.36 33.31 32.90 24.63 81.23 42.61 32.79 36.67 38.82 70.84 38.71 31.55 16.38 32.09 36.82 43.54 31.24 19 ER2c ExonRegion 0 33.28 24.51 55.68 19.50 31.54 60.80 31.91 27.02 30.37 25.14 57.43 39.19 24.84 55.52 36.68 67.09 36.07 26.79 22.49 32.05 32.31 45.01 44.98 20 E2_Ad KnownBoundary 0 63.20 27.56 68.00 24.17 49.83 52.36 31.44 37.25 33.48 24.87 65.54 25.06 21.26 62.75 38.07 40.67 23.66 18.99 14.31 32.41 44.42 43.35 64.88 21 ER2d ExonRegion 1 67.80 54.37 102.28 72.61 78.30 136.48 56.40 75.91 98.54 83.49 132.73 38.22 59.30 118.80 149.66 58.66 91.25 48.51 52.14 71.26 225.77 150.73 87.53 22 E2a_E3a KnownJunction 1 40.67 39.99 105.56 83.07 50.17 103.12 42.71 79.89 98.29 77.82 57.59 49.22 25.32 96.00 100.01 35.72 103.04 54.35 30.78 78.11 138.57 70.17 46.69 23 I2 Intron 0 10.49 4.98 14.40 3.60 11.11 7.56 5.75 7.46 7.17 5.73 16.80 18.50 12.41 10.81 6.75 14.83 9.04 0.92 4.31 5.82 3.76 4.90 3.88 24 I2_AR1 ActiveIntronRegion 0 10.51 4.98 14.42 3.60 11.13 7.57 5.76 7.47 7.18 5.73 16.82 18.52 12.43 10.82 6.76 14.85 9.05 0.92 4.31 5.83 3.77 4.90 3.88 25 E3_Aa NovelBoundary 0 6.59 3.16 25.55 5.79 4.33 0.00 3.97 6.12 12.79 0.00 6.74 0.00 0.00 9.71 10.75 14.70 0.00 2.16 0.00 11.89 0.00 2.76 0.00 26 ER3a ExonRegion 0 198.79 112.46 126.87 93.48 52.34 127.45 53.96 95.72 124.70 110.65 161.58 77.00 71.56 161.82 157.99 110.63 111.21 64.16 87.60 90.15 226.70 187.77 146.96 27 E3a_E4a KnownJunction 0 378.44 224.57 128.20 117.53 116.98 201.42 146.18 110.16 132.29 125.53 257.70 123.49 133.11 231.15 307.31 158.51 188.59 61.35 94.69 85.01 372.39 274.02 225.96 28 ER4a ExonRegion 0 185.58 207.77 170.82 118.55 149.54 129.25 91.42 119.81 134.16 113.20 128.04 110.98 97.85 135.67 183.60 88.21 89.00 52.67 64.99 84.91 150.96 224.62 120.72 29 E4_Da KnownBoundary 1 74.24 44.60 66.47 60.20 99.66 65.64 51.05 64.45 89.12 72.34 30.01 85.08 154.86 64.75 85.79 27.60 25.15 4.60 4.80 41.16 15.63 117.63 28.43 30 ER4b ExonRegion 0 55.48 43.86 37.29 33.46 50.54 48.80 27.60 39.29 52.82 36.71 16.08 30.92 30.51 22.73 28.66 15.81 12.03 7.03 17.69 20.52 15.69 62.82 27.29