Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOOK3 Gene 0 55.23 126.12 63.21 85.71 105.51 149.60 81.98 100.38 99.66 75.36 87.35 110.74 156.43 93.32 84.99 75.66 98.91 57.33 48.61 76.56 55.31 141.14 100.91 2 307602 Transcript 0 32.93 93.25 42.49 65.28 72.19 108.80 81.53 78.38 87.23 70.88 170.33 215.58 325.23 176.85 102.95 132.01 210.29 87.30 53.96 128.74 110.02 136.95 141.36 3 ER1a ExonRegion 0 7.53 14.80 7.42 8.13 6.22 21.10 13.58 9.02 7.37 9.98 39.25 12.70 13.03 51.91 29.99 38.98 43.52 29.19 13.27 22.76 50.13 19.67 37.89 4 E1a_E2a KnownJunction 0 7.56 46.70 36.96 44.82 7.13 23.17 18.20 60.71 42.74 46.90 81.97 49.67 68.18 190.54 97.41 212.42 154.09 160.47 54.03 74.02 104.77 79.54 218.53 5 E2_Aa NovelBoundary 0 38.90 3.35 6.89 6.06 8.66 10.11 5.96 12.16 5.12 6.31 2.37 13.35 6.82 4.77 0.00 0.00 12.34 5.84 4.14 5.50 5.37 0.00 3.84 6 ER2a ExonRegion 0 13.12 59.71 31.87 45.64 22.40 58.40 37.81 63.75 46.24 60.67 84.53 42.34 80.77 142.58 71.65 144.80 112.19 140.51 37.93 78.06 58.89 88.77 146.73 7 E2_Da NovelBoundary 0 11.04 21.18 16.82 15.92 11.04 17.89 14.31 27.36 35.50 14.21 10.53 0.00 0.00 4.83 4.45 3.85 17.95 8.42 4.42 22.88 0.00 3.06 0.00 8 E2a_E3a KnownJunction 0 9.48 47.89 21.64 56.30 35.06 99.94 26.90 72.58 34.52 67.88 81.34 78.63 143.01 61.04 45.12 70.32 94.06 82.20 31.91 45.32 54.18 83.95 60.35 9 I2_SR1 SilentIntronRegion 0 22.72 63.37 20.46 23.28 22.87 12.19 18.66 22.42 17.25 15.82 3.94 9.78 18.49 2.71 10.54 6.96 7.94 6.16 3.72 11.27 0.80 2.93 4.42 10 I2_AR1 ActiveIntronRegion 1 31.65 41.71 26.92 35.66 34.87 24.96 19.40 37.60 21.28 18.82 6.83 10.75 18.24 4.39 20.22 9.81 8.12 11.30 12.06 15.54 2.56 2.72 6.08 11 ER3a ExonRegion 1 15.02 53.76 30.65 36.42 49.08 129.30 76.81 57.68 54.67 50.46 101.94 132.55 165.82 153.67 63.91 78.50 125.30 79.58 40.10 97.84 48.66 109.88 88.18 12 E3a_E4a KnownJunction 1 20.89 67.16 38.23 25.90 35.23 61.21 75.87 46.99 63.31 52.27 137.30 164.30 208.91 156.22 60.20 116.98 141.47 66.95 25.69 131.16 53.13 122.04 124.80 13 ER4a ExonRegion 0 49.22 60.49 39.43 43.40 54.83 83.02 85.93 65.24 73.09 75.45 170.85 226.49 230.82 184.51 83.91 137.88 169.70 72.32 38.54 127.28 84.17 165.86 124.89 14 E4a_E5a KnownJunction 1 60.83 66.96 30.75 67.86 67.32 79.44 96.58 62.72 72.45 68.85 215.63 289.29 249.01 209.14 89.99 126.12 199.81 74.16 55.91 149.44 98.10 180.82 113.53 15 ER5a ExonRegion 0 32.80 67.40 31.56 52.28 51.68 69.41 55.45 50.24 82.70 55.40 179.02 225.82 285.18 167.13 73.23 105.59 194.13 107.32 36.48 129.24 138.85 137.76 133.76 16 E5a_E6a KnownJunction 0 16.52 49.66 29.04 44.45 69.44 101.93 37.85 47.73 89.96 46.98 215.32 165.95 321.08 139.91 63.91 89.04 213.46 112.17 44.99 138.25 172.61 124.61 145.37 17 I5_SR1 SilentIntronRegion 1 5.50 6.90 3.64 9.52 4.45 4.95 12.33 4.73 4.94 3.59 0.79 22.51 7.82 0.68 5.76 2.77 1.12 0.99 0.54 4.22 1.50 0.11 0.50 18 I5_AR3 ActiveIntronRegion 0 12.49 7.63 2.94 6.13 8.03 5.50 13.84 3.46 3.21 4.70 0.00 4.33 13.13 1.38 5.51 14.56 6.60 0.00 0.00 3.83 0.00 4.17 2.94 19 ER6a ExonRegion 0 12.42 59.99 31.25 62.81 55.25 74.65 46.09 61.69 106.86 57.97 185.05 240.35 327.75 154.10 79.70 116.96 199.07 88.96 49.37 143.62 143.66 132.09 150.50 20 E6a_E7a KnownJunction 0 19.04 102.15 45.33 68.59 41.09 72.46 55.07 79.27 124.85 85.80 180.78 317.50 258.10 151.04 70.96 117.92 243.48 110.56 65.70 221.47 153.89 142.98 190.27 21 ER7a ExonRegion 0 20.66 87.64 34.49 60.27 62.77 105.37 81.71 85.54 127.33 85.09 192.83 281.07 326.22 200.98 98.64 155.02 256.21 123.15 62.54 188.31 196.48 135.43 205.05 22 E7a_E8a KnownJunction 0 42.38 112.81 23.59 73.45 107.73 185.40 101.22 96.98 126.73 70.41 191.73 339.71 347.70 245.75 134.12 179.61 182.98 139.70 60.90 156.02 194.85 140.96 189.76 23 ER8a ExonRegion 0 36.06 88.00 29.89 61.80 64.31 88.07 83.00 90.27 113.26 70.26 208.73 302.70 390.33 223.08 101.61 148.78 248.98 129.76 65.15 176.06 173.44 133.07 175.11 24 E8_Da NovelBoundary 0 37.64 3.29 3.19 3.46 18.51 0.00 28.13 11.34 9.66 11.71 0.00 0.00 6.82 2.47 9.64 16.58 0.00 0.00 4.33 2.68 0.00 0.00 3.16 25 E8a_E9a KnownJunction 1 52.38 92.81 46.60 64.66 84.38 82.62 109.88 80.26 107.84 76.23 251.33 177.66 456.14 299.20 87.64 166.79 290.14 105.58 70.40 223.58 191.51 142.31 199.07 26 ER9a ExonRegion 0 47.18 76.67 33.98 68.78 93.10 126.16 92.52 87.39 108.27 69.50 225.62 306.73 506.29 192.65 100.96 173.54 269.47 113.05 99.19 168.45 152.18 137.28 199.19 27 E9a_E10a KnownJunction 0 40.67 89.72 23.77 56.74 91.17 169.96 110.41 88.97 109.92 91.17 228.95 417.14 501.43 236.86 109.03 225.33 323.23 65.99 113.70 186.13 145.92 148.19 191.55 28 ER10a ExonRegion 1 27.39 75.69 25.67 51.84 68.87 142.50 103.05 84.98 92.06 81.15 222.96 289.71 514.04 205.03 84.42 155.56 319.98 88.81 82.62 168.25 152.63 136.80 178.22 29 E10a_E11a KnownJunction 1 39.41 77.49 30.69 43.38 95.67 52.75 71.68 95.54 90.36 76.72 148.25 247.43 663.11 165.93 71.82 117.15 256.01 68.19 116.14 124.00 95.88 116.22 134.70 30 ER11a ExonRegion 0 50.59 67.14 28.81 52.30 73.97 126.97 84.91 89.85 93.10 74.46 183.68 298.67 577.38 219.56 97.75 128.17 272.55 73.49 55.51 145.13 124.30 135.39 139.14 31 E11a_E12a KnownJunction 0 31.71 47.62 28.15 47.51 43.89 157.81 114.38 77.79 75.84 68.07 122.29 217.42 313.13 192.83 94.57 110.74 195.42 63.22 12.24 107.83 111.88 128.04 145.97 32 ER12a ExonRegion 0 54.13 86.77 32.48 67.53 74.15 155.49 130.00 86.44 83.34 75.61 211.82 262.26 510.92 247.55 126.61 148.79 267.34 73.48 44.65 135.19 123.39 148.34 135.32 33 E12a_E13a KnownJunction 1 20.67 77.68 27.47 62.10 85.14 103.92 84.79 56.11 81.86 84.32 166.25 230.48 385.04 186.95 80.97 129.37 201.68 73.41 36.14 98.05 148.51 145.31 152.03 34 ER13a ExonRegion 0 18.78 68.15 37.58 50.67 58.71 133.45 73.98 63.09 72.80 65.88 184.46 214.85 396.84 190.72 88.69 137.36 177.57 90.62 34.71 116.73 158.37 113.62 126.48 35 E13a_E14a KnownJunction 0 23.34 112.28 30.22 65.76 40.58 117.77 50.48 66.58 72.68 65.19 182.99 204.37 310.53 126.32 117.56 122.36 201.87 113.67 42.73 117.03 141.41 116.77 147.08 36 I13_SR2 SilentIntronRegion 0 8.00 5.42 1.23 12.27 0.30 1.83 5.30 5.95 3.71 5.10 0.00 0.00 0.00 2.17 8.70 16.84 4.40 7.39 3.19 2.13 2.20 2.08 3.26 37 ER14a ExonRegion 0 21.71 105.37 25.61 67.79 48.66 99.34 60.94 76.55 81.75 65.49 196.85 205.65 314.17 178.95 92.18 134.34 218.05 93.94 46.82 119.45 148.22 155.25 158.62 38 E14a_E15a KnownJunction 0 43.04 89.66 16.26 74.12 37.86 98.92 86.38 93.07 91.64 75.97 214.42 115.39 297.06 216.55 127.08 125.86 222.35 74.82 45.84 128.28 160.62 175.86 134.70 39 E14a_E16a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 1.45 0.00 6.30 0.00 4.94 0.00 0.00 4.21 2.57 0.00 6.46 13.53 2.69 0.00 40 ER15a ExonRegion 0 37.08 94.15 47.46 76.20 85.68 114.16 86.35 92.85 105.92 71.70 213.91 220.19 319.92 155.89 98.89 134.82 235.18 89.49 37.77 144.85 97.87 155.70 141.08 41 E15a_E16a KnownJunction 0 33.41 133.86 49.55 80.84 56.88 126.97 93.05 89.21 89.90 63.39 183.94 244.28 270.27 143.74 109.40 111.08 232.16 75.90 34.73 133.97 66.35 155.90 130.95 42 E15a_E18a NovelJunction 0 0.00 2.57 1.36 0.00 0.00 7.72 8.17 2.01 0.00 4.62 0.00 6.30 12.82 2.18 0.00 0.00 0.00 1.70 0.00 5.37 2.78 12.98 0.00 43 ER16a ExonRegion 0 36.05 86.40 33.24 50.98 37.34 85.19 72.35 62.05 72.00 45.69 205.35 186.27 287.42 141.48 91.22 95.48 221.80 39.75 25.48 95.26 77.76 139.07 107.35 44 E16_Da NovelBoundary 0 20.82 10.92 1.21 15.35 8.06 2.61 21.77 21.60 22.95 6.10 6.05 25.21 36.20 2.41 0.00 12.65 13.37 16.21 4.52 13.87 0.00 6.25 0.00 45 E16a_E17a KnownJunction 0 38.08 9.08 35.10 29.33 22.75 11.07 21.07 15.69 44.82 34.25 128.82 150.80 254.20 155.51 99.51 91.34 113.60 2.57 0.00 3.26 85.19 136.18 93.73 46 E16a_E18a NovelJunction 0 3.33 0.00 0.00 2.06 0.00 0.00 5.08 2.14 1.65 0.00 0.00 19.66 0.00 2.35 0.00 0.00 0.00 2.57 4.80 0.00 0.00 0.00 3.24 47 I16 Intron 0 5.58 15.15 7.07 18.22 11.42 13.29 18.05 12.67 14.41 8.48 6.44 18.57 28.42 5.62 10.01 14.38 14.72 8.14 7.88 17.55 1.89 3.91 7.02 48 I16_SR1 SilentIntronRegion 0 3.80 13.73 9.93 23.35 10.13 15.71 21.14 16.68 17.00 8.59 6.69 20.53 36.55 5.97 9.05 15.74 14.28 11.04 8.88 23.12 1.96 4.02 7.47 49 I16_AR2 ActiveIntronRegion 0 7.06 15.51 9.12 27.87 22.93 23.44 32.05 12.83 12.69 7.82 6.21 17.00 35.00 7.26 15.01 20.79 17.37 11.07 17.08 21.08 2.00 4.84 10.04 50 I16_SR3 SilentIntronRegion 0 3.49 8.03 5.12 17.67 5.07 17.02 13.72 5.94 7.88 2.29 3.80 1.37 4.16 3.48 6.03 9.91 20.62 6.24 3.63 10.13 1.97 4.92 4.71 51 I16_AR4 ActiveIntronRegion 0 8.47 2.37 3.27 20.44 11.59 11.31 7.94 5.19 9.47 5.35 4.51 5.77 15.63 5.14 10.64 11.89 16.50 2.16 6.37 18.44 0.00 2.08 13.70 52 I16_SR4 SilentIntronRegion 0 6.60 7.56 5.47 23.79 2.12 5.37 6.69 8.14 13.23 9.55 8.09 12.15 15.10 6.10 8.43 18.51 19.23 5.32 4.57 12.87 3.04 6.93 7.99 53 E17_Aa NovelBoundary 1 3.78 36.11 3.64 5.56 16.38 10.39 23.63 11.83 14.61 1.48 7.32 12.60 79.70 9.77 4.45 12.56 18.05 5.02 0.00 12.40 5.99 0.00 3.76 54 ER17a ExonRegion 0 33.50 72.10 32.59 39.29 62.69 59.00 53.56 27.11 34.97 20.94 168.00 184.81 308.20 135.73 104.28 90.86 139.96 13.20 29.12 52.64 66.43 138.05 100.52 55 E17a_E18a KnownJunction 0 39.27 173.52 60.76 80.98 117.91 136.91 110.67 104.94 63.92 52.97 161.78 221.47 386.18 144.62 152.30 107.15 169.14 51.90 62.31 131.41 47.07 158.35 82.03 56 I17 Intron 0 11.12 14.88 5.50 11.76 14.22 9.09 11.90 16.23 12.09 10.10 3.69 11.59 24.76 2.91 7.98 9.05 6.11 4.45 4.47 11.05 1.84 4.35 6.66 57 I17_SR1 SilentIntronRegion 0 11.13 14.89 5.51 11.78 14.24 9.10 11.91 16.25 12.10 10.12 3.70 11.60 24.79 2.92 7.98 9.06 6.12 4.45 4.48 11.07 1.84 4.36 6.67 58 ER18a ExonRegion 0 40.16 147.35 72.93 85.52 104.61 130.44 105.52 100.81 82.13 71.72 135.37 262.48 358.82 121.73 140.13 104.45 199.92 40.54 58.14 129.76 62.55 156.34 113.11 59 E18a_E19a KnownJunction 0 46.08 184.51 87.40 111.07 149.92 143.50 109.74 117.47 91.32 128.51 141.61 315.55 284.07 172.47 165.77 102.28 235.62 47.42 57.04 153.66 54.67 168.88 127.11 60 ER19a ExonRegion 0 47.67 181.43 96.77 117.42 107.24 126.31 110.47 122.74 108.53 101.69 191.36 238.12 389.78 185.21 137.45 126.33 233.19 53.22 66.55 143.50 78.92 171.14 111.27 61 E19a_E20a KnownJunction 0 50.68 263.57 97.93 122.76 159.00 200.23 163.09 108.23 112.24 114.30 188.52 248.63 409.71 133.15 165.03 174.06 254.70 79.55 56.66 134.74 58.94 158.47 138.46 62 ER20a ExonRegion 0 39.95 163.60 73.23 98.50 123.95 204.23 131.98 91.20 113.05 95.04 141.65 274.24 365.47 150.41 135.64 138.25 236.94 94.15 48.69 131.55 55.68 110.23 122.56 63 E20a_E21a KnownJunction 0 30.23 131.95 66.85 102.98 156.03 175.52 120.52 90.77 114.58 78.62 135.46 202.72 411.01 182.77 88.26 156.20 291.44 130.58 44.14 156.28 69.44 98.16 130.61 64 ER21a ExonRegion 0 20.14 94.45 73.73 95.84 97.55 100.02 76.27 109.52 138.16 103.62 208.97 164.76 330.58 290.11 184.71 244.99 288.42 173.02 111.80 140.57 113.18 209.57 210.26 65 E21a_E22a KnownJunction 0 29.63 87.02 82.23 98.96 83.62 86.09 102.68 135.01 148.75 113.73 240.59 206.32 323.19 321.50 226.96 217.98 317.25 194.62 156.52 199.29 170.44 191.60 227.58 66 ER22a ExonRegion 0 59.65 134.71 68.08 90.92 113.25 158.16 83.09 105.67 103.14 77.55 72.75 92.46 124.12 79.51 83.57 66.72 79.04 52.72 48.30 68.18 45.63 144.37 95.23