Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 STAR Gene 0 7.19 9.69 9.36 17.42 7.36 6.27 9.33 10.02 26.59 8.47 1.58 4.90 5.74 2.80 7.91 5.53 6.28 9.49 9.25 15.83 27.01 26.62 9.09 2 397188 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 276449 Transcript 0 0.50 4.70 10.20 15.21 0.49 3.70 2.41 8.01 32.43 3.82 0.81 3.31 0.00 2.36 2.11 0.00 3.06 7.29 9.38 9.01 60.82 53.11 17.30 4 ER1a ExonRegion 0 1.36 2.21 6.38 6.06 0.83 3.13 1.44 3.54 13.32 2.00 0.00 0.55 0.60 0.21 0.64 0.00 0.00 7.48 9.56 10.57 30.47 14.24 6.39 5 E1a_E2a KnownJunction 0 0.00 0.00 2.96 7.99 0.00 5.79 0.00 1.81 24.68 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.50 13.93 12.27 45.47 50.70 0.00 6 ER2a ExonRegion 0 0.87 1.66 1.93 6.09 2.65 2.90 1.42 2.21 22.68 5.12 0.00 0.00 0.00 0.00 0.00 1.33 2.95 5.64 5.28 13.62 29.44 29.63 9.20 7 E2a_E3a KnownJunction 0 0.00 5.06 3.28 6.79 3.57 8.63 2.21 2.05 15.51 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.60 0.00 9.97 28.91 11.70 4.27 8 I2 Intron 0 1.03 0.33 1.49 1.32 0.44 0.60 0.43 3.36 4.50 0.28 0.63 1.16 0.63 0.44 1.00 1.45 0.00 2.85 1.04 1.39 8.26 7.13 1.44 9 I2_AR1 ActiveIntronRegion 0 1.04 0.33 1.50 1.33 0.44 0.60 0.43 3.38 4.53 0.28 0.63 1.17 0.63 0.44 1.01 1.46 0.00 2.86 1.04 1.40 8.31 7.17 1.44 10 E3_Aa NovelBoundary 0 6.96 2.96 0.00 3.43 0.00 0.00 3.62 3.53 1.71 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 3.86 3.26 2.53 13.29 4.35 11 ER3a ExonRegion 0 2.86 3.27 6.44 9.25 2.78 5.47 6.07 1.28 23.21 4.18 0.00 0.00 0.00 0.00 1.63 0.00 4.31 4.30 5.23 13.13 43.01 16.57 6.42 12 E3_Da NovelBoundary 0 3.78 0.00 1.36 5.66 0.00 5.62 0.00 9.24 4.66 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 5.50 2.47 14.63 4.35 13 E3a_E4a KnownJunction 0 3.78 6.58 8.84 18.35 3.40 0.00 0.00 0.00 27.03 7.68 0.00 0.00 0.00 0.00 0.00 0.00 4.11 9.20 17.41 18.54 41.70 44.76 9.90 14 I3 Intron 0 1.45 0.32 0.29 2.88 1.55 1.16 2.65 3.11 5.13 0.54 0.10 0.16 0.65 0.00 0.32 0.47 1.04 2.61 1.84 3.13 5.91 8.76 2.16 15 I3_AR1 ActiveIntronRegion 0 0.72 0.86 0.39 5.81 2.40 1.56 3.08 3.98 7.38 0.36 0.00 0.00 0.82 0.00 0.44 0.00 0.00 3.83 1.35 2.71 5.61 9.40 3.74 16 I3_SR1 SilentIntronRegion 0 1.69 0.14 0.26 1.93 1.28 1.03 2.51 2.85 4.41 0.60 0.14 0.21 0.60 0.00 0.29 0.63 1.39 2.22 2.01 3.29 6.04 8.60 1.65 17 E4_Aa NovelBoundary 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 3.59 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 5.13 10.96 4.35 18 ER4a ExonRegion 0 3.07 2.66 7.98 14.22 1.41 3.64 0.47 0.83 22.47 3.33 0.00 1.14 0.00 0.86 2.24 0.95 4.32 9.80 4.63 15.54 53.75 30.90 5.54 19 E4a_E5a KnownJunction 0 0.00 0.00 13.87 16.58 8.40 2.44 0.00 0.00 21.70 6.37 0.00 0.00 0.00 0.00 0.00 0.00 4.58 11.36 23.25 15.53 42.81 51.37 10.67 20 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 0.37 0.36 14.78 16.03 2.68 2.05 1.71 2.85 24.27 5.33 0.00 0.00 0.00 0.00 0.00 0.00 3.30 9.46 17.24 15.77 57.81 58.95 7.26 22 ER5b ExonRegion 0 0.50 4.70 10.20 15.21 0.49 3.70 2.41 8.01 32.43 3.82 0.81 3.31 0.00 2.36 2.11 0.00 3.06 7.29 9.38 9.01 60.82 53.11 17.30 23 E5_Ab KnownBoundary 0 3.19 3.35 3.40 20.01 3.48 10.45 2.21 8.54 36.72 5.61 2.68 0.00 0.00 0.00 0.00 0.00 4.49 4.15 8.66 14.45 39.66 30.43 22.37 24 ER5c ExonRegion 0 1.87 0.90 6.47 16.69 1.21 3.05 3.35 2.65 33.12 4.78 0.48 3.22 0.00 0.06 1.75 2.68 0.93 4.55 3.78 8.04 37.91 26.22 8.06 25 E5_Db NovelBoundary 0 3.78 6.71 1.48 5.29 0.00 8.52 0.00 15.53 8.77 0.00 0.00 0.00 0.00 0.00 0.00 3.85 4.02 5.84 4.05 0.00 8.28 34.23 0.00 26 E5b_E6a KnownJunction 0 3.11 3.35 5.80 15.32 0.00 4.77 0.00 0.00 30.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 9.41 6.20 40.90 30.68 8.02 27 I5 Intron 0 0.79 2.03 1.59 4.31 0.67 0.46 1.98 2.89 5.51 1.70 0.48 0.98 0.58 0.00 0.51 1.85 0.41 3.66 1.19 4.51 6.87 12.21 3.30 28 I5_AR1 ActiveIntronRegion 0 0.80 2.04 1.60 4.33 0.67 0.46 1.99 2.90 5.54 1.71 0.48 0.99 0.59 0.00 0.51 1.85 0.41 3.68 1.20 4.53 6.90 12.27 3.30 29 E6_Aa NovelBoundary 0 3.78 3.03 0.00 7.66 0.00 4.43 0.00 1.60 9.32 0.00 0.00 0.00 0.00 0.00 4.45 4.36 0.00 6.47 9.13 3.26 0.00 16.72 8.71 30 ER6a ExonRegion 0 2.68 1.00 11.41 14.17 0.00 2.69 0.72 2.32 31.93 5.82 2.41 0.00 0.00 0.00 0.00 0.00 7.09 1.10 9.18 6.04 45.62 32.69 9.78 31 E6_Da NovelBoundary 0 0.00 3.35 0.00 11.19 3.74 0.00 1.68 7.11 2.95 3.95 0.00 0.00 0.00 0.00 10.75 0.00 0.00 0.00 12.71 11.82 5.68 43.11 0.00 32 E6a_E7a KnownJunction 0 6.22 2.57 8.28 13.32 0.00 0.00 0.00 2.34 33.97 4.38 5.11 0.00 0.00 0.00 0.00 0.00 4.21 4.48 8.56 0.00 43.00 31.29 3.67 33 I6 Intron 0 1.43 2.52 0.82 3.90 1.21 1.45 2.09 2.33 4.36 1.54 0.22 1.15 0.44 0.60 1.10 1.34 1.49 2.80 4.67 6.00 3.48 12.22 3.31 34 I6_AR1 ActiveIntronRegion 0 1.44 2.54 0.83 3.91 1.21 1.45 2.10 2.34 4.38 1.55 0.22 1.15 0.44 0.61 1.10 1.35 1.50 2.81 4.69 6.02 3.50 12.28 3.33 35 E7_Aa NovelBoundary 0 0.00 9.14 2.75 12.69 12.99 0.00 6.09 10.23 3.01 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.49 3.67 6.52 5.19 16.84 0.00 36 ER7a ExonRegion 0 10.38 14.18 10.80 21.66 10.97 7.96 13.68 14.42 29.19 11.35 2.33 7.31 9.07 4.27 12.01 8.49 8.51 11.38 10.49 18.54 19.23 27.68 9.93 37 IG37 Intergenic 0 22.79 38.21 21.17 41.51 42.20 47.99 24.68 42.43 41.94 29.14 6.78 13.24 12.31 7.32 11.91 11.06 9.46 19.82 14.48 23.69 5.71 11.95 9.05 38 IG37_SR3 SilentIntergenicRegion 0 17.18 8.02 0.07 9.12 2.57 3.28 8.91 2.99 4.66 1.96 0.71 0.00 0.00 0.69 0.50 7.03 1.14 4.41 3.06 3.56 1.14 4.85 2.71 39 IG37_AR2 ActiveIntergenicRegion 0 25.17 37.90 23.31 49.39 48.60 56.49 28.88 49.76 50.73 35.91 7.48 15.16 14.34 7.66 13.57 9.40 9.27 18.46 14.73 25.50 4.46 14.04 9.07 40 IG37_SR2 SilentIntergenicRegion 0 11.07 20.14 10.80 19.36 15.51 31.57 3.42 13.17 9.60 9.52 6.32 7.78 4.94 4.57 4.90 10.52 10.17 17.03 18.94 17.71 3.72 6.11 8.81 41 IG37_AR1 ActiveIntergenicRegion 0 18.23 47.39 19.35 24.96 32.51 30.03 17.58 30.21 25.22 14.97 5.46 10.04 8.96 7.72 9.55 17.21 11.19 27.12 14.40 21.94 10.88 7.36 9.96