Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SDCBP Gene 0 486.30 220.74 231.15 231.69 432.63 552.70 251.08 386.77 294.88 201.80 345.61 256.35 178.15 163.57 116.39 121.77 111.07 53.40 106.80 134.21 595.87 1399.47 898.50 2 260130 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 424270 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 413219 Transcript 0 63.20 9.21 3.05 5.56 50.08 32.59 25.75 16.96 20.69 5.48 28.85 6.30 14.45 25.60 11.25 37.68 19.07 4.52 8.09 5.82 106.38 133.37 381.66 5 447182 Transcript 0 22.00 28.02 12.45 30.03 117.57 238.61 68.10 61.53 59.37 35.48 85.07 68.57 39.45 31.55 4.45 12.48 9.54 24.46 19.01 22.50 196.02 197.29 140.17 6 422546 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 447267 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 19.87 34.75 6.35 4.76 24.86 186.48 23.63 8.31 8.14 9.41 16.81 0.00 0.00 4.72 2.84 8.47 6.00 6.14 16.92 14.12 49.88 30.20 43.13 9 E1_Ab KnownBoundary 0 130.47 174.71 19.01 22.34 124.79 565.81 154.17 39.27 47.80 36.29 85.23 5.40 0.00 24.02 4.45 36.83 16.08 41.74 90.64 74.85 202.32 151.61 198.90 10 ER1b ExonRegion 1 381.53 197.84 51.41 54.55 249.61 704.35 235.48 114.90 124.63 94.62 256.94 9.38 40.42 172.12 79.37 177.69 121.19 41.00 126.28 131.61 1030.02 741.53 2211.92 11 E1a_E2a KnownJunction 1 860.97 255.02 93.99 104.52 538.79 1115.83 412.57 201.84 206.28 153.87 473.65 17.71 60.22 384.07 148.34 378.45 266.85 75.45 180.24 196.35 1910.96 1301.95 5226.36 12 E1a_E2b KnownJunction 0 63.20 9.21 3.05 5.56 50.08 32.59 25.75 16.96 20.69 5.48 28.85 6.30 14.45 25.60 11.25 37.68 19.07 4.52 8.09 5.82 106.38 133.37 381.66 13 ER2a ExonRegion 1 534.42 185.06 71.68 88.59 377.28 801.83 289.29 158.59 176.62 138.49 412.19 20.56 69.18 296.00 96.47 323.96 217.86 69.75 152.10 157.45 1516.15 1120.93 4084.14 14 ER2b ExonRegion 1 318.01 106.99 67.09 85.68 262.53 486.58 188.21 172.18 185.13 132.21 287.78 80.19 98.38 134.80 47.34 228.92 158.29 65.68 94.04 94.68 904.87 722.18 2695.70 15 E2_Da NovelBoundary 1 41.34 15.98 39.06 66.79 45.84 69.11 29.72 98.66 110.62 80.67 31.17 110.89 136.19 16.95 4.45 16.66 20.57 47.46 9.04 12.14 109.96 95.52 130.43 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2b_E3a KnownJunction 0 55.42 28.68 24.42 31.00 79.20 131.46 63.99 101.90 108.33 73.33 107.19 112.69 134.24 33.96 15.20 21.28 42.36 23.84 31.15 45.00 340.27 152.10 218.96 18 ER2c ExonRegion 1 52.44 22.03 36.76 55.95 63.92 111.15 45.97 112.35 131.81 90.61 91.71 127.72 150.60 31.40 18.70 27.41 40.34 50.09 24.24 34.87 311.58 154.30 239.99 19 ER3a ExonRegion 1 64.51 25.95 72.75 58.85 74.28 106.41 49.69 171.64 167.21 119.45 492.52 108.73 57.17 87.91 44.55 61.51 166.59 52.46 106.93 116.16 1494.23 441.97 458.86 20 E3a_E4a KnownJunction 1 71.49 35.98 135.92 139.58 74.02 131.34 60.72 283.16 239.09 159.94 569.93 136.69 70.77 207.90 119.79 169.10 232.91 94.47 261.09 190.86 1410.93 1300.60 1469.36 21 ER4a ExonRegion 1 62.07 45.60 117.24 146.34 85.49 175.40 52.59 268.64 232.08 149.81 348.74 112.78 69.18 306.84 138.03 293.57 151.26 119.04 218.83 161.91 976.08 1495.65 2400.12 22 E4_Da KnownBoundary 1 83.94 52.23 106.12 164.35 126.23 325.10 74.46 286.61 259.57 155.26 224.43 167.60 121.91 308.32 143.52 400.75 89.85 142.97 184.48 168.29 758.13 1469.36 3130.69 23 E4a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER4b ExonRegion 0 118.25 123.12 97.19 119.31 255.00 549.48 103.55 246.13 241.66 142.58 265.99 167.74 120.33 178.26 67.89 235.27 106.62 110.71 107.94 145.87 850.73 1034.47 2588.48 25 E4b_E5a KnownJunction 0 79.27 95.18 85.36 80.74 335.82 706.98 164.11 170.13 161.14 110.59 211.69 92.28 77.92 74.40 52.91 55.71 57.60 17.91 53.37 80.60 621.36 577.68 384.65 26 E4b_E5b KnownJunction 0 22.00 28.02 12.45 30.03 117.57 238.61 68.10 61.53 59.37 35.48 85.07 68.57 39.45 31.55 4.45 12.48 9.54 24.46 19.01 22.50 196.02 197.29 140.17 27 E4b_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E5_Ac NovelBoundary 0 98.98 159.45 71.40 114.47 351.36 807.49 274.87 196.62 171.03 121.09 246.11 158.45 112.98 87.29 85.91 52.72 99.49 36.77 51.86 88.14 512.75 630.71 426.47 29 ER5a ExonRegion 0 67.20 97.61 85.47 74.28 289.65 620.74 145.30 175.87 164.27 111.25 225.67 127.72 69.18 86.48 54.40 49.78 63.54 28.18 51.76 90.43 639.63 615.68 399.38 30 ER5b ExonRegion 0 96.94 147.94 95.82 107.87 384.91 857.58 256.72 215.97 198.73 133.44 300.18 181.84 113.97 100.37 70.36 64.05 98.04 43.79 70.87 99.25 728.11 793.09 514.50 31 ER5c ExonRegion 0 336.33 306.45 115.21 161.51 296.91 619.80 257.49 260.38 243.21 176.10 391.83 228.36 121.16 180.80 77.64 115.70 138.42 84.42 103.73 133.80 791.67 1089.47 735.44 32 E5a_E6a KnownJunction 0 544.47 374.34 154.13 199.34 139.90 292.27 199.66 371.10 321.41 200.63 451.69 278.64 104.70 221.26 104.70 170.47 165.97 117.31 169.13 149.82 747.57 1732.05 1025.13 33 I5_SR6 SilentIntronRegion 0 59.53 38.10 9.86 21.37 36.32 9.44 18.77 20.91 12.29 7.03 7.77 24.93 51.68 6.62 7.83 21.50 10.06 4.00 7.45 21.21 5.07 46.20 15.25 34 E6_Ab NovelBoundary 0 319.39 236.87 118.45 145.67 153.74 212.83 155.01 221.96 201.24 116.53 196.68 78.93 45.13 102.54 79.49 48.79 81.72 67.03 115.02 96.20 548.46 884.82 592.51 35 ER6a ExonRegion 1 411.27 317.62 157.54 200.68 145.16 284.70 175.92 334.35 307.70 192.68 392.74 230.27 85.89 214.38 109.70 125.39 151.02 108.32 164.84 144.55 821.57 1569.93 974.60 36 ER6b ExonRegion 0 550.04 321.81 185.57 231.22 350.72 593.94 271.75 347.32 316.00 193.64 445.12 273.00 154.33 231.15 114.09 156.58 178.48 108.31 140.57 177.30 1229.39 1441.99 1078.81 37 E6a_E7a KnownJunction 0 410.96 231.01 198.69 278.75 739.81 1143.94 437.87 401.87 340.74 179.89 395.36 378.12 251.77 317.38 162.56 180.29 201.68 111.22 218.55 209.58 1361.88 1612.28 1253.30 38 I6_AR1 ActiveIntronRegion 0 15.52 36.60 2.04 13.63 14.27 0.00 2.65 5.19 12.35 1.15 2.90 5.05 4.69 12.99 0.00 0.50 9.90 17.86 10.62 17.02 2.94 15.28 23.49 39 ER7a ExonRegion 0 461.34 362.00 191.98 228.08 518.02 784.00 312.63 374.53 348.05 215.98 504.73 290.45 258.85 243.11 141.96 175.04 168.25 74.67 169.53 182.43 852.55 1696.20 1201.00 40 E7a_E8a KnownJunction 0 793.10 304.42 204.55 223.02 566.30 662.74 338.51 346.38 330.18 216.88 498.81 308.65 307.77 188.71 137.83 135.09 209.82 75.20 109.84 133.20 620.18 1294.78 1050.82 41 ER8a ExonRegion 0 549.42 255.52 212.03 234.34 456.56 648.47 320.70 376.48 350.71 215.23 501.21 339.72 319.58 225.63 125.10 173.22 168.92 72.79 154.07 165.54 701.83 1525.88 1126.49 42 E8a_E9a KnownJunction 0 857.11 333.95 260.16 264.80 788.37 876.26 413.54 486.07 419.15 243.64 488.81 428.24 288.13 333.39 167.38 239.25 197.10 91.40 245.28 188.88 950.26 2383.09 1638.29 43 ER9a ExonRegion 0 868.27 267.10 239.91 239.03 772.76 960.91 376.34 437.68 393.04 244.39 534.75 462.54 389.78 331.53 165.16 262.41 221.82 119.60 247.01 204.99 1248.66 2010.75 1714.04 44 E9_Da KnownBoundary 0 941.80 280.48 253.69 241.43 711.21 1109.87 408.81 444.71 374.04 255.16 485.60 523.52 461.82 324.62 237.59 257.37 213.74 110.14 244.15 179.29 1191.31 1613.50 1392.87 45 ER9b ExonRegion 0 609.18 219.46 322.34 300.48 537.15 551.92 283.01 496.32 334.82 238.58 310.98 298.87 197.00 141.85 138.11 94.35 81.07 31.11 86.27 127.97 320.39 1629.91 617.03 46 IG30_SR1 SilentIntergenicRegion 0 1.48 2.82 1.05 1.07 0.00 1.44 5.05 2.57 0.00 0.05 0.00 8.41 9.58 2.78 1.53 5.52 1.84 1.06 2.32 6.20 1.61 0.00 11.03 47 IG30_SR2 SilentIntergenicRegion 0 0.84 1.74 1.14 1.29 3.70 1.68 3.66 2.24 2.24 1.48 0.76 8.29 11.17 3.31 1.94 4.41 6.49 4.61 0.63 6.04 2.74 6.20 11.13 48 IG30_AR1 ActiveIntergenicRegion 0 0.00 2.03 0.00 0.00 0.00 1.83 2.65 3.46 1.24 2.10 0.00 12.99 21.89 3.52 0.48 2.97 0.00 1.85 0.00 2.84 4.41 10.42 2.94 49 IG30_SR3 SilentIntergenicRegion 0 0.25 2.19 2.64 0.00 3.62 4.17 3.17 2.88 1.24 1.46 0.00 11.55 15.45 1.72 0.00 1.57 0.00 3.01 1.25 4.84 3.28 11.60 7.72