Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RNF170 Gene 0 28.69 50.55 31.99 53.10 51.72 89.26 40.78 46.85 50.86 36.89 38.56 83.08 124.37 68.23 85.29 41.91 36.24 32.03 35.21 47.56 35.76 59.01 36.97 2 240159 Transcript 1 27.26 62.69 35.04 45.78 36.42 46.34 26.32 50.85 47.48 47.36 39.90 63.17 233.75 110.60 147.23 50.84 62.27 40.71 48.00 49.73 40.71 77.58 29.79 3 319073 Transcript 0 0.00 8.62 4.49 0.00 7.72 5.11 1.99 8.95 8.30 4.32 19.85 12.60 33.60 12.42 50.56 0.00 4.11 13.31 0.00 9.46 2.97 9.19 16.13 4 319104 Transcript 0 1.82 1.50 1.80 1.25 0.99 1.38 0.82 1.59 2.27 1.68 0.71 0.88 5.44 0.81 2.88 0.73 2.03 2.04 3.56 3.41 1.08 0.27 1.10 5 ER1a ExonRegion 0 12.82 13.99 12.95 17.72 23.22 57.34 24.23 18.14 20.56 14.82 26.32 6.61 44.01 49.98 41.81 52.83 34.26 19.03 38.39 27.44 33.01 31.08 64.42 6 E1a_E2a KnownJunction 0 6.82 9.47 23.00 17.15 7.30 10.85 0.00 16.18 24.51 20.39 20.53 12.00 58.11 35.55 56.49 12.82 13.65 16.79 24.47 19.69 32.31 13.96 37.05 7 I1_AR2 ActiveIntronRegion 0 4.90 6.55 1.30 6.70 4.48 3.68 6.38 3.47 3.62 3.62 1.94 6.14 10.44 4.92 4.30 5.91 5.53 7.06 3.49 14.06 8.22 1.39 5.65 8 I1_AR3 ActiveIntronRegion 0 9.24 7.70 3.23 5.43 22.63 5.57 6.78 2.67 6.43 0.79 0.00 4.14 8.71 8.36 5.18 3.04 1.72 2.93 5.53 9.59 3.15 0.46 7.09 9 I1_AR4 ActiveIntronRegion 0 7.49 8.09 2.45 6.27 6.20 5.47 6.25 2.44 3.33 2.50 1.62 3.42 10.85 5.70 2.52 1.81 2.82 3.44 1.94 11.03 7.67 1.27 2.12 10 I1_SR4 SilentIntronRegion 0 12.34 19.20 4.40 11.32 11.86 6.64 9.09 5.05 5.46 4.65 2.12 7.50 9.07 5.09 3.60 4.16 3.34 4.31 3.22 11.50 6.26 2.75 5.73 11 I1_AR5 ActiveIntronRegion 0 10.44 22.06 1.79 6.82 11.13 5.57 8.28 4.44 4.37 3.54 3.23 7.17 10.71 3.02 2.83 3.98 2.65 2.22 3.41 7.90 1.97 1.67 2.89 12 I1_SR5 SilentIntronRegion 0 5.94 19.52 0.31 3.73 5.54 3.22 4.32 2.01 4.05 1.82 1.49 9.26 8.46 1.81 7.34 0.00 0.00 1.61 1.87 4.74 0.00 2.44 5.13 13 E2_Aa NovelBoundary 0 18.08 12.43 0.00 4.63 24.28 2.73 15.68 10.64 7.52 11.90 2.53 0.00 0.00 7.00 4.45 3.50 0.00 3.86 4.80 2.75 5.50 0.00 7.77 14 ER2a ExonRegion 0 19.15 24.69 35.08 48.42 17.02 46.27 14.64 37.71 57.53 41.10 70.19 51.35 94.88 95.12 78.03 87.88 54.12 59.63 49.86 56.84 68.53 57.57 79.07 15 E2a_E3a KnownJunction 1 33.93 33.02 41.63 62.00 63.07 157.13 56.84 39.84 61.80 29.82 104.82 155.75 236.84 120.49 107.18 233.61 44.97 103.18 107.20 64.62 94.89 67.72 244.74 16 E2a_E4a NovelJunction 0 0.00 3.22 3.90 0.00 0.00 0.00 2.08 0.00 6.45 0.00 5.11 6.30 20.29 7.42 6.30 8.03 4.77 4.23 8.75 11.95 3.15 0.00 4.10 17 E3_Aa NovelBoundary 0 16.74 0.00 1.69 8.66 0.00 8.01 13.20 8.50 1.79 6.21 0.00 0.00 0.00 2.47 0.00 3.59 0.00 4.15 0.00 5.88 0.00 0.00 0.00 18 ER3a ExonRegion 0 17.99 45.46 38.26 56.25 91.64 162.29 56.02 34.25 57.95 37.18 80.75 95.53 174.09 101.68 127.20 93.00 50.16 93.04 60.82 54.87 96.91 60.53 110.12 19 E3a_E4a KnownJunction 0 13.34 65.25 37.11 46.55 67.49 112.38 72.56 32.20 68.89 49.08 94.66 93.18 207.78 113.37 149.58 29.99 60.31 74.53 80.19 65.52 83.09 58.85 43.54 20 ER4a ExonRegion 0 19.07 69.53 33.70 47.49 55.97 126.43 58.32 42.94 63.98 45.39 87.35 89.09 195.09 130.14 132.53 79.87 81.16 71.45 56.28 77.06 115.40 55.09 53.99 21 E4_Da NovelBoundary 0 5.93 13.42 1.42 21.24 6.28 5.34 0.00 12.77 3.50 11.20 0.00 6.30 0.00 2.47 28.56 0.00 0.00 1.95 11.77 9.20 11.06 0.00 11.69 22 E4a_E5a KnownJunction 0 18.82 42.82 33.17 50.21 88.54 91.25 56.79 47.03 56.19 27.96 93.13 45.01 135.06 116.78 125.22 84.59 95.93 56.00 61.65 68.90 144.37 68.40 52.84 23 E4a_E6a KnownJunction 1 0.00 8.62 4.49 0.00 7.72 5.11 1.99 8.95 8.30 4.32 19.85 12.60 33.60 12.42 50.56 0.00 4.11 13.31 0.00 9.46 2.97 9.19 16.13 24 ER5a ExonRegion 0 18.13 45.21 38.81 41.16 31.78 55.98 28.27 47.46 53.16 43.07 57.39 100.46 159.08 102.82 141.10 50.57 70.61 51.94 43.78 62.08 77.34 66.42 46.55 25 E5_Da NovelBoundary 0 6.30 11.97 4.64 12.12 4.33 10.56 5.52 5.30 11.92 8.00 0.00 0.00 26.46 2.47 23.98 3.25 10.85 1.70 0.00 15.66 0.00 0.00 18.35 26 E5a_E6a KnownJunction 1 27.26 62.69 35.04 45.78 36.42 46.34 26.32 50.85 47.48 47.36 39.90 63.17 233.75 110.60 147.23 50.84 62.27 40.71 48.00 49.73 40.71 77.58 29.79 27 E5a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E6_Aa NovelBoundary 0 0.00 0.00 3.10 4.76 12.14 24.76 17.80 16.63 6.92 8.62 4.53 36.91 55.84 0.00 10.14 4.10 0.00 0.00 8.85 11.63 3.15 2.57 3.33 29 ER6a ExonRegion 0 54.25 45.05 35.24 67.30 66.34 144.56 54.37 59.25 72.00 42.68 89.61 121.42 232.90 166.48 146.55 87.37 87.67 52.60 58.28 82.08 83.11 84.34 68.36 30 E6_Da NovelBoundary 0 17.11 27.30 15.05 28.17 22.41 20.61 15.06 16.22 20.92 17.81 11.79 6.00 63.31 31.49 13.97 43.83 16.64 24.33 4.61 11.38 11.74 11.21 20.06 31 E6a_E7a KnownJunction 0 55.34 30.13 27.08 47.71 71.65 83.59 59.00 44.73 38.28 44.05 62.38 78.93 125.15 98.65 133.88 78.87 53.86 24.79 44.52 36.30 21.68 73.73 42.68 32 I6 Intron 0 11.56 22.88 10.14 22.08 19.65 36.64 19.22 14.73 16.72 12.63 11.42 17.47 41.94 17.44 17.15 11.89 10.57 7.60 7.50 19.63 4.10 8.63 8.98 33 I6_SR1 SilentIntronRegion 0 14.57 14.69 9.46 19.85 16.15 27.12 13.62 11.60 12.36 8.13 6.41 9.16 27.13 18.12 14.20 11.37 8.14 9.77 7.32 13.20 4.68 5.49 7.49 34 I6_AR1 ActiveIntronRegion 0 11.19 25.24 9.16 21.47 16.17 33.68 18.44 14.42 16.50 12.36 10.76 18.42 43.75 16.99 16.40 12.97 8.14 6.28 6.62 21.85 3.78 9.80 9.66 35 I6_SR2 SilentIntronRegion 0 15.64 30.60 16.74 34.82 26.65 49.26 27.44 22.52 24.98 17.75 29.84 34.64 57.46 18.57 22.18 14.01 24.58 12.15 9.96 27.84 7.72 10.43 17.42 36 I6_AR2 ActiveIntronRegion 0 8.14 25.73 10.13 21.47 24.94 45.44 23.10 15.91 18.81 15.73 11.85 19.47 49.46 17.07 19.40 10.62 11.80 5.91 8.02 20.88 2.96 9.74 7.36 37 E7_Aa NovelBoundary 0 39.86 58.48 13.39 23.84 46.10 60.36 32.50 33.80 30.38 8.89 5.21 23.86 74.02 12.48 19.16 12.73 8.42 9.58 4.80 17.71 3.15 17.33 0.00 38 ER7a ExonRegion 0 36.18 66.29 37.82 66.94 65.35 102.63 49.92 59.38 58.38 43.44 29.63 105.25 137.56 59.76 89.54 30.34 27.93 24.54 31.62 48.88 19.68 70.55 24.48 39 E7_Da NovelBoundary 0 273.83 191.81 91.51 152.53 177.08 167.01 213.57 84.53 81.54 102.75 47.06 32.41 27.27 43.20 33.38 160.56 84.53 103.97 139.11 136.08 55.78 93.50 113.62 40 I7 Intron 0 52.00 53.59 32.47 75.02 65.34 95.62 39.80 52.63 48.79 36.82 19.29 50.90 38.37 30.27 43.00 18.33 16.07 18.38 25.75 37.80 19.38 36.23 20.37 41 I7_AR1 ActiveIntronRegion 0 71.23 73.86 45.16 103.85 90.48 133.60 54.49 73.10 67.68 51.34 26.58 71.29 52.25 42.30 59.20 25.03 21.96 24.79 34.81 51.79 26.46 50.66 27.99 42 ER8a ExonRegion 0 3.64 3.01 3.60 2.50 1.98 2.76 1.64 3.17 4.53 3.37 1.43 1.76 4.06 1.62 5.76 1.46 4.05 4.08 7.12 6.82 2.15 0.54 2.20