Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MCM4 Gene 0 105.99 260.19 284.01 224.40 305.38 289.53 442.89 237.18 137.79 368.77 1249.43 615.99 282.47 1038.65 632.60 818.23 888.74 634.10 280.58 459.97 87.46 150.96 105.30 2 396826 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 262105 Transcript 0 0.13 2.12 1.89 0.15 0.48 2.70 2.09 2.45 0.19 3.28 8.95 1.04 0.00 5.14 1.56 10.69 5.11 11.92 0.54 3.02 0.41 0.69 1.78 4 429229 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 19.86 53.32 24.27 12.92 40.66 135.11 141.52 16.64 13.24 52.11 257.17 2.41 0.00 316.04 153.77 385.28 281.92 341.54 90.92 148.91 25.36 35.39 38.83 6 E1_Da KnownBoundary 0 0.00 6.58 4.88 0.00 0.00 4.77 0.00 0.00 0.00 2.50 8.16 0.00 0.00 0.00 0.00 12.56 4.11 20.81 0.00 0.00 0.00 0.00 4.01 7 E1a_E1b KnownJunction 1 26.52 49.93 46.15 18.05 40.83 71.78 97.82 31.63 23.03 77.44 157.25 23.71 0.00 140.21 52.04 305.22 174.10 568.49 68.14 103.23 16.49 42.43 21.94 8 ER1b ExonRegion 0 0.13 2.12 1.89 0.15 0.48 2.70 2.09 2.45 0.19 3.28 8.95 1.04 0.00 5.14 1.56 10.69 5.11 11.92 0.54 3.02 0.41 0.69 1.78 9 E1_Ab KnownBoundary 0 0.00 0.00 5.50 0.00 0.00 0.00 0.00 4.35 0.00 3.33 14.69 6.30 0.00 2.12 0.00 3.25 17.86 9.29 0.00 0.00 2.66 3.06 0.00 10 ER1c ExonRegion 0 3.44 19.33 16.43 7.72 8.67 27.31 22.79 18.97 12.75 46.69 181.09 9.65 2.37 124.88 44.95 110.72 114.90 171.24 39.38 66.34 26.50 17.15 9.13 11 E1b_E2a KnownJunction 1 3.41 3.03 16.44 17.45 3.48 13.23 6.36 35.45 27.00 76.72 508.81 22.36 0.00 171.70 40.05 75.88 291.26 74.08 16.57 142.41 61.96 14.39 20.32 12 ER2a ExonRegion 1 13.08 46.72 72.79 67.86 37.35 72.03 74.39 76.07 53.57 163.45 676.83 51.90 38.20 554.42 229.29 362.44 492.03 409.51 106.74 294.11 63.73 76.53 51.38 13 E2a_E3a KnownJunction 1 16.15 95.18 96.77 81.51 198.47 275.30 313.42 128.81 76.47 257.96 1071.75 249.98 94.96 752.08 209.90 461.59 577.47 479.20 172.62 377.37 93.35 76.79 33.29 14 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 1 21.17 92.57 89.65 78.83 168.57 282.92 352.92 121.68 80.33 241.03 1034.10 118.97 68.29 806.15 209.93 450.22 640.77 471.03 171.12 373.96 98.37 103.43 44.99 16 ER3b ExonRegion 1 29.58 128.22 119.30 107.11 125.35 255.65 335.30 151.13 85.19 249.58 941.32 221.58 71.91 880.94 316.46 500.54 674.65 525.14 178.30 392.91 83.01 120.10 78.08 17 E3_Ab KnownBoundary 0 23.93 186.35 123.59 140.81 149.58 220.67 256.50 168.77 97.80 256.13 930.66 386.08 104.54 945.50 377.28 555.32 653.76 578.27 179.21 409.26 65.61 104.46 93.56 18 ER3c ExonRegion 1 34.22 180.44 135.38 135.87 110.21 190.26 222.58 185.15 104.94 314.17 1235.47 261.28 181.46 926.41 321.17 601.38 820.27 574.10 189.85 391.55 102.76 124.78 77.88 19 E3b_E4a KnownJunction 1 42.75 140.90 149.58 122.96 135.91 254.06 292.49 192.35 103.21 354.77 1166.08 283.59 196.74 1056.10 296.81 619.07 875.36 559.41 255.35 435.08 90.07 160.00 89.55 20 ER4a ExonRegion 0 55.26 152.94 179.29 176.57 196.27 228.83 367.66 256.74 142.70 411.14 1635.86 477.81 254.73 1160.91 437.46 794.14 1040.56 650.79 321.19 511.22 96.49 215.32 92.50 21 E4a_E5a KnownJunction 0 109.72 195.49 259.30 270.13 273.26 325.21 522.62 324.81 211.89 493.75 1983.66 750.99 384.72 1179.47 651.09 1168.92 1283.87 676.19 483.21 615.71 103.29 377.26 113.11 22 ER5a ExonRegion 0 77.45 187.17 246.11 230.46 240.65 284.16 493.87 318.79 212.30 509.89 1979.43 925.87 452.10 1173.60 507.57 960.46 1318.26 528.86 351.15 585.10 67.56 288.72 109.45 23 E5a_E6a KnownJunction 0 53.42 242.72 253.10 230.44 299.41 320.16 541.08 370.32 187.44 531.68 1985.45 827.07 512.30 1267.65 562.34 855.59 1264.05 370.22 299.40 604.78 39.04 308.07 113.11 24 ER6a ExonRegion 0 65.33 241.13 239.20 245.93 293.97 341.33 452.15 334.31 221.56 534.65 2121.38 1207.15 694.42 1180.94 551.36 880.03 1351.79 445.13 308.75 591.97 40.17 271.73 101.99 25 E6a_E7a KnownJunction 0 73.27 199.04 264.30 279.48 265.62 262.58 456.64 341.16 224.45 563.59 1797.72 1380.45 963.25 1199.08 565.92 814.23 1253.01 520.65 288.57 643.13 33.79 206.17 93.81 26 ER7a ExonRegion 0 63.66 186.68 238.55 232.52 222.53 293.91 469.77 319.30 197.05 522.49 1926.54 1541.98 590.44 1125.91 570.84 1003.40 1321.90 639.81 367.67 660.74 72.85 250.77 135.95 27 E7a_E8a KnownJunction 0 120.24 193.32 262.03 233.80 246.69 281.03 524.21 307.11 208.85 543.12 2140.17 1390.95 609.54 1302.14 621.30 1295.73 1586.44 996.00 340.15 713.70 110.58 184.01 146.91 28 E7a_E10a NovelJunction 0 0.00 6.31 1.83 5.96 0.00 10.56 6.54 2.09 4.14 11.34 7.00 18.01 0.00 4.36 5.44 10.94 8.88 8.46 27.48 2.62 0.00 0.00 0.00 29 ER8a ExonRegion 0 50.81 161.03 192.08 191.33 164.94 254.16 355.02 201.49 139.93 346.84 1404.74 1112.56 456.48 1152.71 529.42 992.39 1037.56 888.84 295.58 502.52 114.32 144.54 128.95 30 E8a_E9a KnownJunction 0 63.05 311.59 241.39 232.97 247.88 336.34 533.75 225.83 116.58 339.86 1233.47 488.26 180.83 1315.74 647.01 1070.15 1023.75 1042.72 368.20 380.18 100.70 134.22 116.86 31 ER9a ExonRegion 0 93.91 351.99 207.42 205.80 299.88 304.56 549.17 217.41 135.59 356.37 1551.32 596.50 248.34 1242.18 538.07 940.86 1136.71 850.00 293.74 491.75 123.23 135.33 131.15 32 E9a_E10a KnownJunction 0 67.12 495.70 227.99 309.62 318.17 323.05 658.60 233.05 120.25 365.32 1472.16 720.38 301.44 1224.92 781.14 851.23 1043.38 813.94 261.37 593.02 100.33 139.92 145.37 33 ER10a ExonRegion 0 102.76 408.72 369.96 356.22 386.53 379.19 631.77 313.76 169.64 491.84 1730.20 1069.68 387.09 1429.64 729.81 1183.21 1292.33 821.73 402.90 664.91 123.90 203.61 157.97 34 E10a_E11a KnownJunction 0 188.26 757.63 379.85 301.23 579.20 516.18 961.78 271.91 195.17 497.11 1599.62 1131.82 487.47 1263.35 916.38 885.15 1071.81 578.73 327.07 654.77 120.03 177.21 143.41 35 ER11a ExonRegion 0 117.14 394.48 367.82 270.88 305.16 313.91 517.37 268.08 167.11 429.81 1400.93 700.18 283.17 1212.62 793.28 1005.66 993.48 911.96 297.25 631.43 120.99 158.58 132.73 36 E11a_E12a KnownJunction 0 184.11 576.08 441.91 356.76 353.14 331.46 467.06 329.54 213.94 448.25 1865.89 515.27 323.36 1192.84 1133.69 1357.17 1210.47 1143.49 410.65 807.34 151.17 162.94 151.69 37 ER12a ExonRegion 0 128.03 249.91 435.47 327.84 245.58 303.57 409.61 334.47 188.38 485.29 1781.56 625.91 290.38 1345.43 920.15 1278.20 1170.22 1059.09 353.53 671.52 126.75 208.56 152.98 38 E12a_E13a KnownJunction 0 216.78 214.11 474.55 316.91 243.72 321.80 395.61 303.37 227.98 521.12 1878.48 695.18 408.90 1442.29 749.62 1076.30 1284.71 792.51 323.68 685.26 155.86 181.37 133.59 39 ER13a ExonRegion 0 134.19 245.03 341.31 247.82 240.89 301.36 437.23 229.12 144.82 391.47 1164.78 563.87 216.96 1081.28 775.85 835.64 911.71 748.21 246.15 488.06 100.67 134.39 97.60 40 E13a_E14a KnownJunction 0 159.95 350.86 362.91 258.61 572.33 597.84 1170.58 239.63 117.76 371.74 1029.21 398.38 223.04 1326.22 879.04 904.29 822.07 811.99 264.85 446.46 90.38 147.02 84.51 41 I13 Intron 0 24.74 17.37 25.35 19.09 26.30 13.47 35.50 26.54 11.59 18.43 75.90 62.94 58.48 52.92 40.93 64.51 47.72 51.50 18.85 31.87 5.68 12.33 9.53 42 I13_AR2 ActiveIntronRegion 0 27.89 18.94 30.73 23.75 31.60 15.56 40.10 30.62 12.87 21.75 87.53 74.00 69.65 54.57 45.47 67.90 51.96 54.18 20.34 37.97 5.57 15.05 9.32 43 I13_AR3 ActiveIntronRegion 0 29.19 19.44 15.63 10.14 19.46 9.36 38.67 25.35 12.21 12.75 52.85 46.96 46.54 56.70 25.10 73.04 52.54 62.82 17.62 18.69 7.83 5.74 13.70 44 ER14a ExonRegion 0 156.06 287.95 472.16 352.86 531.84 390.94 593.63 326.87 170.61 510.74 1518.26 537.97 378.15 1519.32 1144.17 1058.04 1175.81 698.20 364.90 508.98 124.74 171.24 135.83 45 E14a_E15a KnownJunction 0 166.55 269.69 491.20 334.79 358.57 357.07 522.97 306.37 178.79 478.76 1517.91 502.06 430.17 1039.44 823.17 880.37 1095.46 725.14 312.57 457.39 98.16 147.70 96.46 46 ER15a ExonRegion 0 316.04 497.39 599.19 461.28 1097.99 659.18 1196.82 444.88 224.99 616.27 1909.52 1013.94 701.05 1817.95 1371.77 1276.77 1305.18 858.16 462.31 625.42 123.47 218.49 181.46 47 E15a_E16a KnownJunction 0 257.53 403.09 610.33 384.77 760.53 434.92 819.97 400.80 184.08 506.16 1383.88 748.14 450.78 1201.55 971.76 912.67 1017.58 655.38 345.61 536.65 62.02 190.37 112.51 48 ER16a ExonRegion 0 148.89 307.37 310.92 205.38 377.75 305.35 440.90 226.03 121.91 312.69 870.71 427.86 185.46 831.30 629.72 658.11 613.79 459.49 278.48 334.70 59.47 125.80 84.49 49 IG10 Intergenic 0 40.74 120.26 97.59 92.55 124.43 70.24 109.03 108.19 39.69 113.16 60.35 88.72 29.64 74.61 78.01 46.00 34.50 29.80 32.03 78.39 1.46 37.62 9.32 50 IG10_AR1 ActiveIntergenicRegion 0 80.64 232.99 193.07 180.66 240.44 137.76 210.44 211.41 77.62 218.51 120.35 171.47 58.31 147.52 153.68 90.38 66.82 56.41 62.53 151.63 2.92 75.33 17.51 51 IG10_SR1 SilentIntergenicRegion 0 3.46 15.58 3.44 7.55 17.79 6.24 16.53 7.78 2.09 8.03 1.28 17.49 2.79 4.30 4.70 2.93 7.32 4.37 3.96 7.39 0.00 0.03 0.00