Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAB2A Gene 0 121.44 262.17 120.55 152.70 208.78 351.63 164.13 198.01 199.08 177.97 91.65 160.70 128.18 104.37 117.26 66.32 72.36 67.96 63.27 128.23 97.25 289.41 138.85 2 262646 Transcript 0 60.38 120.53 49.14 60.72 71.66 168.85 62.89 83.02 73.95 62.80 51.59 49.00 50.17 60.03 70.96 33.34 48.60 42.61 33.70 58.09 81.72 98.71 65.29 3 481569 Transcript 0 4.32 3.39 2.97 8.73 4.23 2.12 9.92 8.16 10.11 7.95 1.73 5.08 7.58 1.16 3.37 6.00 5.11 2.89 2.28 13.96 2.34 1.79 4.45 4 466595 Transcript 0 2.64 0.57 0.01 0.04 0.74 1.00 1.47 1.20 1.41 1.48 2.07 0.05 2.13 3.84 0.60 5.93 6.52 2.39 1.66 0.62 4.24 2.67 1.68 5 429861 Transcript 0 22.62 11.89 8.77 17.79 14.48 7.25 21.00 10.46 9.26 7.87 4.92 15.12 21.93 2.25 3.78 11.53 5.20 3.35 3.27 13.82 1.86 4.69 16.85 6 396697 Transcript 0 5.38 6.85 8.63 5.51 7.36 22.16 7.23 7.78 11.32 9.13 10.39 5.41 5.28 12.45 13.42 10.28 9.44 17.48 7.57 16.50 14.51 17.32 24.59 7 452437 Transcript 0 1.41 1.79 4.03 1.12 8.82 5.72 7.46 3.98 5.53 4.28 1.04 11.36 13.25 0.62 1.13 2.30 3.64 0.81 1.36 3.06 0.49 3.46 1.62 8 396696 Transcript 0 5.18 6.02 4.14 14.21 10.01 6.47 16.42 8.27 15.51 9.39 3.31 7.48 16.21 2.82 5.12 6.84 8.07 5.40 3.96 12.51 3.53 9.04 9.24 9 IG38_AR8 ActiveIntergenicRegion 0 2.28 0.00 1.23 8.28 2.68 1.83 0.00 1.33 3.99 3.00 0.00 4.33 0.00 0.00 0.00 0.00 3.30 1.85 3.19 6.06 8.81 0.00 2.94 10 IG38_AR9 ActiveIntergenicRegion 0 0.42 0.00 1.23 7.27 2.68 1.83 0.00 1.38 5.93 2.29 0.00 5.48 0.00 0.00 0.00 0.00 2.86 1.60 3.61 7.38 7.64 0.00 2.74 11 ER1a ExonRegion 1 25.90 33.62 14.07 12.74 25.25 189.45 35.38 28.36 37.02 36.20 81.24 13.11 30.68 93.03 94.81 47.67 75.25 70.96 37.99 65.70 145.52 62.46 85.89 12 E1_Ab KnownBoundary 1 33.71 76.43 51.62 62.06 35.48 261.21 66.29 114.02 133.22 122.25 179.05 19.81 108.43 224.21 211.14 111.77 166.90 325.78 86.87 200.38 247.85 188.84 234.32 13 ER1b ExonRegion 1 67.29 109.81 94.69 75.90 65.78 411.42 69.54 130.39 160.72 153.11 212.34 49.88 123.80 331.83 273.75 227.18 182.86 418.40 140.69 222.16 439.59 305.93 555.09 14 E1a_E4b KnownJunction 0 108.32 136.42 197.36 140.74 220.71 608.51 174.84 173.87 273.87 222.87 209.74 83.13 145.93 332.28 347.74 209.77 171.67 427.67 190.31 316.84 292.52 384.91 562.46 15 ER1c ExonRegion 1 123.82 165.23 151.74 106.53 129.10 585.29 112.87 150.95 208.22 192.01 239.04 59.89 195.03 381.13 387.32 315.29 206.31 480.26 191.92 300.18 498.59 391.88 834.99 16 ER1d ExonRegion 1 105.45 153.36 180.13 116.57 159.13 549.38 140.57 166.54 248.40 202.53 248.32 76.40 185.95 359.12 374.60 291.09 204.07 473.35 183.25 313.14 386.30 380.30 770.96 17 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 0.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.82 0.00 0.64 0.00 19 ER4a ExonRegion 0 16.14 20.08 25.89 16.52 22.07 66.48 21.68 23.33 33.97 27.38 31.17 16.24 15.83 37.35 40.25 30.84 28.06 52.43 22.70 48.67 43.52 51.31 73.78 20 ER4b ExonRegion 0 119.18 156.13 207.61 161.09 194.99 522.81 179.87 183.14 288.11 248.77 332.05 170.74 174.98 306.20 268.67 252.21 254.63 348.08 194.89 369.07 417.03 478.45 469.70 21 E4_Da KnownBoundary 0 3.19 9.60 1.45 4.43 0.00 0.00 10.95 4.97 9.14 8.73 2.26 0.00 6.66 0.00 6.06 0.00 4.39 5.76 0.00 8.63 3.15 0.00 4.35 22 E4a_E5a KnownJunction 0 173.36 187.47 215.43 204.87 247.88 892.38 299.25 177.40 275.69 289.41 468.70 180.96 153.56 456.30 344.40 286.85 346.80 297.72 240.85 389.64 654.78 666.53 508.42 23 ER4c ExonRegion 0 4.32 3.39 2.97 8.73 4.23 2.12 9.92 8.16 10.11 7.95 1.73 5.08 7.58 1.16 3.37 6.00 5.11 2.89 2.28 13.96 2.34 1.79 4.45 24 I4_AR1 ActiveIntronRegion 0 4.75 2.60 3.85 3.86 6.35 2.89 13.79 16.14 21.96 10.11 2.79 5.69 16.88 1.99 4.91 11.95 14.57 3.32 5.36 22.27 4.74 2.75 8.53 25 I4_AR5 ActiveIntronRegion 0 9.39 9.02 3.04 6.00 13.84 2.37 15.17 11.90 10.54 1.26 1.79 6.73 8.62 2.63 3.83 13.73 7.32 4.43 2.94 8.26 2.85 2.69 2.71 26 ER5a ExonRegion 0 119.05 244.75 206.02 163.85 185.61 781.68 260.02 216.31 278.26 277.53 438.09 174.90 289.06 434.98 365.17 245.86 411.11 254.20 176.32 354.63 555.79 653.86 435.79 27 E5a_E6a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 2.55 2.55 1.53 2.53 0.00 0.00 6.83 0.00 12.22 0.00 2.07 0.00 0.00 3.15 3.12 0.00 28 E5a_E7a KnownJunction 0 136.84 294.42 245.79 193.95 144.23 570.24 293.33 283.86 378.27 337.52 301.76 198.51 217.19 352.64 312.50 214.47 329.59 243.41 159.44 271.07 457.89 653.36 432.19 29 E6_Aa NovelBoundary 0 10.59 12.76 4.08 29.03 22.84 2.78 12.63 63.01 13.86 28.61 0.00 5.40 35.55 0.00 22.25 27.34 4.77 6.96 13.46 23.07 2.84 5.69 12.63 30 ER6a ExonRegion 0 4.13 1.72 0.02 0.13 2.22 3.01 4.41 1.05 1.68 1.68 3.68 0.14 6.38 2.39 1.81 5.57 15.63 2.54 4.98 1.86 9.57 2.08 5.05 31 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 2.30 0.00 0.00 3.93 2.57 0.00 0.00 0.00 2.82 0.00 32 ER7a ExonRegion 0 197.01 291.49 297.03 223.76 274.89 639.62 230.85 264.16 359.34 318.09 408.07 230.50 258.74 406.34 370.91 251.91 329.49 322.87 192.12 374.42 429.22 651.11 536.31 33 E7a_E8a KnownJunction 0 264.42 364.47 359.98 324.87 320.20 805.33 228.37 362.48 385.24 360.33 425.79 326.36 254.69 344.17 310.28 331.28 341.47 353.02 231.44 407.02 341.75 775.28 599.59 34 ER8a ExonRegion 0 230.43 465.23 237.05 276.89 328.77 794.35 264.79 358.31 444.11 398.99 406.62 429.97 353.27 461.18 418.50 285.93 338.18 232.22 190.92 386.34 407.54 817.05 488.43 35 E8a_E9b KnownJunction 0 210.19 730.59 267.85 260.61 384.64 893.18 404.66 361.12 457.55 464.68 327.40 555.48 361.99 492.91 446.51 231.82 233.94 142.31 211.21 362.67 283.25 740.62 458.06 36 E8a_E10a NovelJunction 0 3.33 8.42 5.32 5.19 7.39 16.30 0.00 2.38 9.55 4.41 2.00 0.00 0.00 0.00 13.60 4.36 0.00 1.95 4.80 12.21 2.47 11.27 7.77 37 I8_SR1 SilentIntronRegion 0 47.70 18.12 3.27 18.39 14.71 4.98 19.14 7.41 3.94 12.71 0.90 6.58 13.73 2.10 8.09 3.58 5.64 0.77 1.42 9.98 0.91 2.83 4.13 38 I8_AR3 ActiveIntronRegion 0 35.02 12.39 2.01 16.97 20.68 1.83 32.26 7.86 2.13 15.22 1.93 8.66 9.38 0.44 1.05 5.94 4.50 0.00 6.37 12.77 1.80 4.17 3.74 39 I8_SR2 SilentIntronRegion 0 35.01 15.57 4.64 16.48 24.61 13.81 27.81 9.89 2.71 12.30 1.01 14.12 15.56 0.00 7.21 4.93 5.06 0.75 2.48 5.64 0.73 3.16 5.15 40 I8_AR4 ActiveIntronRegion 0 24.49 16.27 11.90 15.38 15.29 4.98 18.54 13.83 3.18 9.83 1.93 14.84 24.12 0.00 12.85 4.67 6.60 0.00 12.74 7.29 0.00 5.06 0.84 41 I8_SR3 SilentIntronRegion 0 29.70 15.90 9.88 12.84 5.35 8.61 20.98 13.15 9.24 8.93 2.46 10.63 16.06 0.00 12.75 2.43 9.40 0.00 11.20 4.26 0.00 6.57 2.94 42 I8_AR5 ActiveIntronRegion 0 24.67 9.02 9.41 19.86 13.66 12.00 22.80 10.84 11.09 9.23 2.25 19.11 28.63 0.26 9.95 9.17 6.64 2.62 4.41 12.00 2.38 4.87 3.71 43 ER9a ExonRegion 0 5.18 6.02 4.14 14.21 10.01 6.47 16.42 8.27 15.51 9.39 3.31 7.48 16.21 2.82 5.12 6.84 8.07 5.40 3.96 12.51 3.53 9.04 9.24 44 E9_Ab KnownBoundary 0 3.19 3.09 6.71 28.07 4.16 0.00 14.00 8.71 12.76 9.62 5.37 6.30 0.00 0.00 4.45 0.00 4.77 6.09 0.00 2.68 2.72 0.00 4.35 45 ER9b ExonRegion 0 198.40 523.05 271.90 300.73 524.57 948.93 398.54 396.95 468.16 432.33 370.84 632.77 433.13 394.06 414.75 280.37 280.93 250.13 188.14 317.54 263.47 691.33 480.68 46 E9_Da KnownBoundary 0 65.34 30.26 14.67 17.41 50.42 22.60 52.16 21.15 21.79 12.14 8.53 44.11 45.61 9.59 4.45 15.55 12.44 1.91 8.94 20.45 5.19 3.12 31.24 47 E9a_E10a KnownJunction 0 233.15 517.87 250.97 272.83 551.10 862.91 382.40 411.77 423.64 468.96 302.81 539.13 322.38 433.58 474.32 260.44 205.98 253.53 151.91 305.46 208.68 579.88 517.47 48 ER9c ExonRegion 0 22.62 11.89 8.77 17.79 14.48 7.25 21.00 10.46 9.26 7.87 4.92 15.12 21.93 2.25 3.78 11.53 5.20 3.35 3.27 13.82 1.86 4.69 16.85 49 I9_SR1 SilentIntronRegion 0 11.25 14.73 5.53 19.63 15.43 5.71 21.10 14.65 15.05 13.88 2.47 26.05 29.32 2.45 6.21 13.38 14.96 2.32 5.65 13.62 2.82 8.21 9.98 50 I9_AR1 ActiveIntronRegion 1 17.10 13.59 4.69 26.40 12.72 10.70 23.97 10.01 17.51 11.85 3.03 29.39 39.98 3.39 4.42 11.92 7.55 2.84 4.61 15.13 3.71 7.78 9.73 51 ER10a ExonRegion 0 298.21 642.82 300.30 358.56 657.23 1036.26 471.43 524.27 508.97 500.75 447.06 544.89 415.37 512.42 497.92 362.43 318.23 309.91 292.41 360.65 466.93 1162.69 604.61 52 E10_Da KnownBoundary 0 0.00 0.00 0.00 0.00 8.40 9.03 7.38 0.00 4.28 1.40 2.11 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 E10a_E11a KnownJunction 0 303.61 732.76 395.34 442.33 549.75 839.18 514.36 615.99 612.20 583.15 601.31 729.99 435.85 437.99 396.94 243.53 420.10 310.94 314.46 374.87 764.12 850.78 516.36 54 ER10b ExonRegion 0 1.41 1.79 4.03 1.12 8.82 5.72 7.46 3.98 5.53 4.28 1.04 11.36 13.25 0.62 1.13 2.30 3.64 0.81 1.36 3.06 0.49 3.46 1.62 55 ER11a ExonRegion 0 241.15 645.81 233.63 278.93 485.94 895.32 376.82 396.02 427.84 406.54 253.58 385.63 214.54 304.54 302.69 210.59 193.91 253.09 192.89 292.05 424.28 689.79 422.59 56 E11_Da KnownBoundary 0 89.35 336.58 91.92 171.31 385.99 672.74 317.57 185.57 257.98 234.21 95.13 135.34 144.31 74.70 59.34 91.60 73.21 83.16 62.40 155.96 154.88 400.28 162.53 57 E11_Db KnownBoundary 0 180.18 350.27 136.22 203.87 349.58 488.58 342.70 235.81 317.16 244.95 88.18 221.92 97.40 99.54 97.53 62.29 41.33 66.16 105.60 205.94 42.50 401.39 193.35 58 ER11b ExonRegion 0 165.51 485.62 185.28 320.55 516.42 878.76 446.97 371.10 498.74 414.49 144.97 312.59 218.56 193.92 141.29 120.37 92.09 135.99 150.67 283.19 157.34 616.93 302.77 59 ER11c ExonRegion 0 306.43 648.89 292.51 419.20 598.15 944.68 456.41 538.38 543.74 495.14 142.26 407.81 315.34 166.23 217.46 79.25 90.90 65.69 104.67 303.89 87.57 737.72 212.93 60 E11_Dc KnownBoundary 0 187.74 426.11 370.00 499.60 451.27 856.72 330.91 676.45 528.03 518.27 104.97 351.26 305.50 128.44 205.45 66.48 76.02 40.17 88.76 260.33 69.19 735.54 159.37 61 ER11d ExonRegion 1 94.87 207.45 84.20 108.70 118.08 148.25 90.39 137.68 110.88 89.40 21.94 84.89 69.66 27.04 47.12 19.01 21.95 14.26 29.41 50.47 17.92 134.96 44.68