Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPR124 Gene 0 52.78 21.60 122.62 53.01 38.80 37.97 31.69 54.98 45.51 62.37 0.71 0.60 0.68 1.52 0.92 0.35 1.64 70.11 20.53 28.55 654.81 255.31 379.92 2 428068 Transcript 0 0.39 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 416514 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 315215 Transcript 0 0.00 0.00 2.31 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 11.86 3.00 4.35 5 412232 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 21763 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 0.77 0.00 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 1.68 0.00 0.78 2.03 1.34 4.10 2.90 2.22 0.00 0.00 0.00 0.21 0.00 0.00 0.00 9.13 3.84 2.64 98.35 4.59 78.71 10 E2_Ab KnownBoundary 0 0.00 0.00 4.88 0.00 0.00 2.73 8.35 2.46 7.26 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.07 0.00 3.26 123.49 15.12 39.86 11 E2_Ac KnownBoundary 0 0.00 0.00 6.33 0.00 3.40 7.67 10.55 1.89 4.34 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 9.12 4.80 0.00 105.82 20.94 37.39 12 ER2b ExonRegion 0 0.00 0.00 7.82 0.00 2.06 7.05 9.47 2.53 9.98 4.06 0.00 0.00 0.00 2.12 0.00 0.00 0.00 12.51 3.19 2.13 161.04 25.48 66.19 13 ER2c ExonRegion 0 1.22 4.23 14.54 2.59 3.82 9.98 6.03 5.71 12.65 10.82 0.00 0.00 0.00 0.90 0.00 0.00 0.64 19.24 5.90 10.64 319.81 80.72 120.49 14 E2a_E3a KnownJunction 0 3.63 9.80 62.18 16.05 27.25 24.08 7.77 18.94 36.92 36.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61.06 12.52 31.32 605.54 200.54 377.73 15 E2a_E4a NovelJunction 0 3.26 0.00 1.63 1.80 0.00 0.00 2.25 0.00 3.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.01 15.37 3.84 16 ER3a ExonRegion 0 8.97 7.03 54.44 19.27 13.53 20.91 14.36 27.78 54.71 35.49 0.00 0.00 0.00 0.25 0.00 0.00 2.34 55.71 16.06 26.00 731.91 257.95 332.70 17 E3a_E4a KnownJunction 0 10.30 11.38 51.30 18.08 8.06 34.30 3.62 31.91 65.68 49.29 0.00 0.00 0.00 2.47 0.00 0.00 0.00 55.42 4.52 19.43 743.80 213.03 353.57 18 E4_Aa NovelBoundary 0 0.00 0.00 13.13 8.96 4.33 0.00 6.18 4.68 3.50 9.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.57 0.00 23.65 34.10 13.53 32.78 19 ER4a ExonRegion 0 8.64 10.90 66.90 27.88 11.11 21.11 6.97 35.89 57.86 39.17 0.00 0.00 0.00 1.24 0.00 0.00 0.00 83.87 12.92 30.94 835.21 286.83 382.29 20 E4a_E5a KnownJunction 0 15.93 28.28 114.04 49.18 22.67 48.49 13.60 38.81 61.34 44.86 0.00 0.00 0.00 2.47 0.00 0.00 0.00 113.87 43.39 43.53 869.95 338.62 471.46 21 ER5a ExonRegion 0 7.79 18.08 98.08 39.43 14.08 37.44 13.50 49.67 71.74 51.29 0.00 0.00 0.00 0.41 0.00 0.00 0.00 73.99 23.05 34.34 849.96 282.49 359.25 22 E5a_E6a KnownJunction 0 10.89 20.98 99.43 34.59 0.00 83.59 25.13 57.71 84.78 61.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.08 37.84 51.96 947.48 378.73 440.22 23 ER6a ExonRegion 0 12.26 17.31 101.93 34.39 11.93 45.28 24.42 51.06 85.67 60.59 0.00 0.00 0.00 0.92 0.00 0.00 2.34 94.34 41.81 42.26 991.98 362.42 542.22 24 E6_Da NovelBoundary 0 13.93 3.35 34.36 14.92 0.00 5.68 9.89 21.81 9.35 4.11 0.00 0.00 0.00 2.47 0.00 0.00 0.00 21.43 4.61 15.79 43.18 37.47 57.19 25 E6a_E7a KnownJunction 0 13.93 15.46 102.98 46.98 19.69 25.89 25.08 38.69 75.66 77.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 98.99 36.05 35.67 866.12 410.08 560.07 26 E6a_E8a NovelJunction 0 0.00 0.00 1.51 0.00 0.00 2.56 3.67 0.00 1.77 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 5.44 11.94 4.35 27 I6_SR1 SilentIntronRegion 0 10.39 6.30 22.82 8.25 1.11 6.02 4.41 4.97 3.11 5.48 0.00 0.00 0.00 0.00 0.00 0.00 2.95 15.40 9.82 12.00 28.74 14.11 56.99 28 E7_Aa NovelBoundary 0 0.00 6.64 26.49 13.35 0.00 0.00 16.74 11.54 1.79 4.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.92 4.42 12.08 11.74 21.13 15.88 29 ER7a ExonRegion 0 11.37 10.47 93.54 35.03 15.68 26.58 19.03 38.75 60.62 57.59 0.00 0.00 0.00 0.10 0.00 0.00 1.34 88.74 21.87 37.43 810.09 265.57 396.39 30 E7_Da NovelBoundary 0 12.59 14.80 100.41 24.07 18.85 16.01 21.55 29.86 53.44 52.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63.96 19.01 26.08 474.14 209.66 254.47 31 E7b_E8a KnownJunction 0 30.45 14.93 123.89 34.13 12.48 23.28 27.87 39.51 84.69 77.04 0.00 0.00 0.00 2.47 0.00 0.00 4.77 153.29 37.37 67.69 851.66 302.92 552.04 32 ER7b ExonRegion 0 16.53 14.14 108.07 24.14 13.76 19.30 23.14 32.92 66.46 65.43 0.00 0.00 0.00 1.62 0.00 0.00 3.30 105.76 27.00 53.70 723.45 278.30 423.72 33 ER8a ExonRegion 0 15.18 10.31 93.57 30.96 10.24 30.75 17.11 34.70 50.34 59.05 0.46 0.00 0.26 1.41 0.00 0.00 1.47 84.37 13.90 35.05 773.93 239.58 356.65 34 E8a_E9a KnownJunction 0 21.49 9.01 103.22 57.07 8.15 18.80 22.70 36.23 65.60 55.90 0.00 0.00 6.82 0.00 0.00 0.00 4.77 121.00 17.60 35.86 822.81 305.43 389.85 35 ER9a ExonRegion 0 14.23 12.51 93.15 36.59 8.25 20.86 19.55 40.84 55.84 68.44 0.00 0.00 2.05 2.50 0.00 0.83 0.60 84.03 21.53 40.40 814.69 274.03 422.20 36 E9a_E10a KnownJunction 0 17.48 14.67 64.78 31.00 16.21 32.59 12.59 49.29 71.76 60.14 0.00 0.00 0.00 2.24 0.00 0.00 0.00 104.21 12.61 37.26 708.71 296.86 376.02 37 E9a_E11a NovelJunction 0 3.78 0.00 12.33 9.06 0.00 8.35 2.12 3.90 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.44 0.00 0.00 5.81 20.27 11.52 38 ER10a ExonRegion 0 11.14 7.15 51.56 24.63 12.88 21.94 18.83 28.94 40.12 47.74 1.47 1.35 0.00 1.79 0.52 0.69 1.26 53.45 17.58 23.97 670.91 251.40 315.49 39 E10a_E11a KnownJunction 0 20.60 9.34 73.59 40.72 40.49 22.77 25.04 55.24 68.89 71.05 0.00 6.30 0.00 2.47 0.00 3.50 4.68 105.17 18.54 23.84 829.98 311.62 438.42 40 ER11a ExonRegion 0 15.28 12.07 72.96 36.93 23.35 21.64 26.56 52.52 58.98 75.60 0.68 1.85 0.00 1.01 0.70 0.20 0.57 90.54 17.82 27.26 829.23 252.30 375.71 41 E11a_E12a KnownJunction 0 34.97 6.58 82.43 40.75 26.32 43.72 9.10 55.00 49.85 86.28 0.00 0.00 0.00 4.94 0.00 0.00 0.00 95.05 21.65 18.28 809.72 331.40 445.34 42 ER12a ExonRegion 0 12.75 10.61 61.79 28.27 15.71 20.25 18.17 28.47 39.89 62.53 0.61 0.00 0.00 0.89 0.00 0.00 0.26 79.07 13.61 23.18 710.61 242.76 305.95 43 E12a_E13a KnownJunction 0 7.41 17.17 64.60 34.99 21.39 19.19 22.74 42.06 37.85 51.28 0.00 0.00 0.00 0.00 0.00 0.00 3.83 121.75 25.32 14.89 697.84 259.02 461.22 44 E12a_E16a KnownJunction 0 0.00 0.00 2.31 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 11.86 3.00 4.35 45 I12 Intron 0 4.26 3.77 15.74 7.69 4.10 6.64 10.56 3.94 3.71 4.68 0.00 0.00 0.00 0.22 0.00 0.48 0.00 14.13 4.62 9.94 36.22 9.57 24.13 46 I12_SR1 SilentIntronRegion 0 4.28 3.78 15.79 7.72 4.11 6.66 10.59 3.96 3.72 4.70 0.00 0.00 0.00 0.22 0.00 0.48 0.00 14.18 4.63 9.97 36.34 9.60 24.21 47 E13_Aa NovelBoundary 0 25.12 6.05 25.10 8.86 4.33 4.88 34.71 3.98 1.30 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.04 0.00 8.63 37.31 9.00 36.96 48 ER13a ExonRegion 0 12.46 12.41 84.38 27.72 14.79 27.53 22.53 33.99 44.17 51.52 0.57 0.00 0.00 1.29 0.00 0.67 1.79 108.89 14.99 26.93 710.67 259.73 393.43 49 E13a_E14a KnownJunction 0 38.45 15.39 106.09 27.04 12.56 31.12 43.99 37.05 46.24 69.71 2.42 0.00 0.00 2.30 0.00 0.00 4.58 168.47 12.71 37.65 833.93 367.95 469.24 50 ER14a ExonRegion 0 19.28 10.17 80.29 26.30 7.25 18.57 18.67 29.02 32.03 47.90 0.32 0.00 0.00 1.26 0.00 0.00 1.05 71.45 14.15 21.71 634.34 173.10 263.34 51 E14a_E15a KnownJunction 0 10.52 22.23 65.20 23.91 12.31 7.84 18.72 21.28 34.46 38.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.17 14.40 15.21 458.57 111.93 170.47 52 I14_SR1 SilentIntronRegion 0 7.58 1.99 13.20 9.10 2.24 2.90 4.87 2.28 5.16 4.85 0.00 0.00 0.18 0.34 0.10 0.00 0.61 16.20 4.15 9.31 39.46 12.67 35.87 53 ER15a ExonRegion 0 7.43 8.69 52.87 22.60 7.39 25.28 13.49 21.46 33.26 36.73 0.94 0.87 0.00 1.33 0.00 0.00 0.00 49.88 11.75 21.74 521.07 150.95 217.92 54 E15a_E16a KnownJunction 0 5.70 6.25 78.62 44.65 20.20 5.34 6.45 31.63 49.74 42.71 0.00 0.00 0.00 4.59 0.00 0.00 0.00 60.31 12.42 31.19 531.10 230.91 291.69 55 ER16a ExonRegion 0 16.62 11.55 82.01 44.04 18.71 27.12 24.67 44.35 48.60 60.37 1.31 0.00 0.00 1.48 0.00 1.18 0.00 112.55 22.80 38.36 819.81 292.90 412.94 56 E16a_E17a KnownJunction 0 2.89 6.71 98.64 55.74 51.19 64.79 38.55 70.28 53.53 70.22 2.42 0.00 0.00 0.00 0.00 0.00 0.00 62.84 3.67 42.82 878.54 179.48 307.14 57 ER17a ExonRegion 0 13.83 15.92 105.78 59.55 26.78 64.05 32.50 53.78 52.01 68.88 0.30 0.00 1.59 2.67 0.00 1.22 0.00 103.65 20.47 36.96 873.59 331.26 451.53 58 E17a_E18a KnownJunction 0 49.79 22.23 109.13 71.02 43.80 45.14 37.71 75.82 57.20 74.52 2.42 0.00 0.00 0.00 0.00 0.00 0.00 104.50 58.26 48.77 881.56 498.01 643.98 59 ER18a ExonRegion 0 14.84 16.27 124.87 52.20 20.20 24.43 19.98 61.60 61.82 76.10 0.62 0.00 0.13 2.59 0.00 0.00 1.06 92.77 29.63 42.95 914.81 295.35 424.75 60 E18a_E19a KnownJunction 0 6.22 20.06 129.42 68.56 52.89 36.63 15.32 42.88 63.48 92.75 0.00 0.00 0.00 2.47 0.00 0.00 0.00 61.81 29.18 38.16 994.24 237.95 371.76 61 E18a_E20a NovelJunction 0 0.00 0.00 1.57 0.00 0.00 0.00 0.00 3.86 2.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.20 0.00 0.00 22.49 27.74 15.37 62 E19_Aa NovelBoundary 0 7.04 12.76 24.13 21.18 0.00 2.73 3.97 5.87 5.61 8.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.66 0.00 11.06 15.01 8.63 15.11 63 ER19a ExonRegion 0 21.99 22.91 156.59 58.20 33.54 33.44 33.61 56.08 68.03 80.07 1.10 0.00 1.98 0.51 1.16 0.00 0.15 54.92 28.60 47.35 886.82 272.29 343.62 64 E19a_E20a KnownJunction 0 29.49 18.75 154.78 48.31 25.81 44.52 44.74 75.90 64.15 73.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.36 19.86 38.16 706.12 241.69 360.40 65 ER20a ExonRegion 0 100.78 35.40 187.51 83.52 69.65 56.31 49.41 83.14 52.29 82.38 1.03 1.02 1.17 1.93 1.84 0.47 2.69 76.39 26.58 32.43 700.87 318.82 480.53 66 ER20b ExonRegion 0 31.28 9.49 4.36 5.60 5.35 5.30 5.74 4.42 3.57 4.08 0.00 0.00 1.04 1.62 5.16 0.00 0.00 1.64 1.42 1.89 10.77 7.87 8.81 67 ER20c ExonRegion 0 2.65 1.53 0.92 1.70 0.00 0.00 0.00 2.16 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00