Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC090691.1 Gene 0 6.83 1.85 2.46 3.59 4.98 6.54 5.41 4.68 3.28 1.44 2.81 5.77 7.44 2.41 1.58 4.05 3.26 7.28 6.23 13.22 10.83 2.19 7.13 2 499740 Transcript 0 5.11 1.39 1.76 2.46 3.53 4.65 3.74 3.20 2.33 0.92 2.22 4.23 6.03 1.98 1.16 2.39 2.00 4.80 4.44 8.81 6.85 1.34 5.11 3 IG7 Intergenic 0 13.04 5.91 6.41 11.55 9.13 14.94 6.26 9.19 4.70 1.80 3.09 5.50 4.86 3.23 2.88 3.02 2.06 8.56 4.63 16.24 9.85 4.07 8.67 4 IG7_AR1 ActiveIntergenicRegion 0 12.31 13.72 11.86 20.12 9.20 26.10 6.53 9.97 7.23 3.56 4.30 0.47 1.17 2.48 5.12 1.10 0.43 7.16 6.08 28.30 12.69 2.27 8.06 5 IG7_SR2 SilentIntergenicRegion 0 13.86 11.23 9.69 21.52 10.13 30.72 7.17 13.44 8.41 3.89 4.45 3.20 1.85 3.85 5.54 0.78 0.79 10.36 5.64 31.93 13.61 3.92 16.57 6 IG7_AR2 ActiveIntergenicRegion 0 7.41 11.83 5.74 14.36 6.60 28.24 4.94 17.11 4.59 1.87 1.06 2.96 0.00 3.33 6.33 0.00 0.00 8.81 2.12 32.06 7.13 6.29 3.92 7 IG7_SR3 SilentIntergenicRegion 0 3.85 5.64 6.22 9.18 4.83 19.09 5.00 7.14 5.43 1.55 3.51 4.33 4.33 4.94 3.80 1.23 0.43 11.96 6.85 19.31 6.57 2.69 12.53 8 IG7_AR3 ActiveIntergenicRegion 0 39.42 25.93 16.83 41.30 35.88 49.11 18.69 17.84 10.50 5.29 6.83 26.29 16.12 7.13 3.35 1.56 1.44 15.12 7.10 27.82 16.67 7.88 15.31 9 IG7_SR4 SilentIntergenicRegion 0 32.08 13.34 14.80 25.42 22.43 28.30 11.96 15.05 8.23 2.64 6.28 6.74 13.28 5.31 4.62 4.43 2.19 11.00 5.45 29.34 17.36 5.29 11.84 10 IG7_AR4 ActiveIntergenicRegion 0 16.97 7.20 14.99 17.54 9.93 12.72 8.42 13.41 7.02 3.77 3.77 4.80 4.19 4.93 3.92 4.90 1.95 13.17 3.77 23.77 17.05 4.87 13.56 11 IG7_SR5 SilentIntergenicRegion 0 12.03 4.89 11.87 21.09 15.92 15.74 9.31 15.66 10.49 2.15 5.31 10.61 5.48 5.53 4.01 3.37 4.23 15.53 8.80 25.49 18.53 6.76 12.18 12 IG7_AR7 ActiveIntergenicRegion 0 8.52 2.10 6.70 6.55 3.05 5.82 3.48 11.03 4.74 0.84 3.40 2.31 3.54 3.45 3.54 2.10 1.46 7.94 5.63 14.30 17.22 1.74 7.55 13 IG7_SR9 SilentIntergenicRegion 0 14.83 4.03 5.65 8.95 6.93 13.34 6.56 9.00 5.48 1.86 5.18 8.65 8.63 4.31 4.01 4.46 3.56 11.58 7.47 21.32 18.34 3.77 13.89 14 IG7_AR8 ActiveIntergenicRegion 0 51.42 3.54 7.03 22.16 33.50 10.93 10.44 12.87 4.76 4.33 6.37 6.57 11.46 7.94 7.09 5.39 6.60 15.40 11.92 37.82 22.04 8.95 13.81 15 IG7_SR10 SilentIntergenicRegion 0 19.31 4.66 6.24 10.42 12.14 11.92 6.33 6.29 4.07 3.07 3.17 9.07 8.81 2.72 2.91 4.16 3.70 8.11 6.86 23.75 13.00 2.73 10.66 16 ER1a ExonRegion 0 9.94 2.74 3.10 3.96 6.15 8.15 6.15 5.15 4.04 1.20 4.72 7.88 13.36 4.48 2.15 2.38 2.31 7.02 7.80 13.18 8.79 1.56 9.09 17 E1_Da NovelBoundary 0 9.41 0.00 0.00 3.40 0.00 9.09 0.00 0.00 0.00 1.34 0.00 0.00 6.82 0.00 0.00 0.00 4.11 4.39 0.00 9.27 8.40 6.18 16.13 18 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 Ix Intron 0 3.83 0.82 1.29 2.25 1.88 4.98 2.80 1.55 1.30 0.52 2.92 0.70 1.92 2.71 3.97 3.59 2.66 8.78 3.52 11.34 9.98 2.10 7.68 20 Ix_SR1 SilentIntronRegion 0 3.84 0.82 1.29 2.25 1.89 4.99 2.80 1.56 1.30 0.52 2.92 0.70 1.93 2.72 3.97 3.59 2.66 8.79 3.53 11.37 9.99 2.10 7.69 21 E2_Aa NovelBoundary 0 21.63 3.35 4.76 3.20 0.00 9.77 0.00 8.87 17.22 8.30 0.00 0.00 0.00 6.00 0.00 4.02 0.00 18.86 12.80 17.77 11.24 0.00 3.67 22 ER2a ExonRegion 0 5.40 1.44 2.16 3.43 4.45 5.81 5.07 4.46 2.94 1.56 1.94 4.80 4.73 1.46 1.32 4.81 3.69 7.39 5.52 13.24 11.76 2.47 6.23 23 IG8 Intergenic 0 8.82 2.21 2.76 4.85 5.17 6.65 6.52 6.07 3.34 1.86 1.87 4.26 7.02 2.40 2.54 4.40 2.99 6.38 5.10 13.82 8.58 2.58 7.54 24 IG8_SR1 SilentIntergenicRegion 0 9.25 2.41 2.70 5.07 5.01 7.10 6.74 6.26 3.57 1.97 1.97 4.39 6.87 2.35 2.62 4.69 3.26 6.88 5.34 14.19 9.26 2.46 7.81