Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM66A Gene 0 0.28 7.48 3.84 4.67 1.41 4.34 2.87 8.80 20.21 1.80 0.00 0.00 0.00 0.35 0.00 0.00 0.22 11.11 8.16 11.89 1.01 0.82 0.77 2 433621 Transcript 0 0.33 9.75 4.05 8.27 1.92 3.52 4.45 8.11 25.12 1.24 0.00 0.00 0.00 0.18 0.00 0.00 0.03 15.10 16.08 16.07 0.92 0.63 0.36 3 ER1a ExonRegion 0 0.04 2.88 4.20 4.13 0.75 4.36 1.86 9.03 18.37 2.53 0.00 0.00 0.00 0.35 0.00 0.00 0.31 7.70 2.09 7.93 0.80 0.97 0.82 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 1.36 4.61 4.08 1.79 0.00 2.35 3.27 7.16 9.75 0.29 0.00 0.00 0.00 0.18 0.00 0.00 0.00 14.03 7.17 8.21 0.17 0.00 1.28 6 E2a_E3a KnownJunction 0 0.00 0.00 1.83 3.73 0.00 2.56 0.00 16.96 13.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 7 I2_SR6 SilentIntronRegion 0 3.10 19.19 6.13 18.94 5.34 5.90 4.24 7.82 18.79 0.03 0.00 0.20 0.00 0.12 0.05 0.00 0.12 5.04 4.20 9.28 0.72 0.00 0.63 8 I2_AR8 ActiveIntronRegion 0 1.36 23.03 2.35 11.92 4.89 9.03 4.85 5.84 14.38 0.00 0.00 0.00 0.00 0.14 0.00 0.00 0.41 1.49 0.98 9.48 0.00 0.00 1.45 9 I2_AR10 ActiveIntronRegion 0 0.00 26.40 9.27 29.60 9.67 5.47 15.81 21.20 38.81 12.90 0.00 0.00 0.00 2.05 0.00 0.00 0.00 54.40 31.55 45.35 6.14 1.67 3.54 10 E3_Aa NovelBoundary 0 0.00 0.00 1.36 5.93 0.00 2.78 0.00 2.34 18.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.48 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 7.35 1.28 5.65 0.86 1.06 1.56 11.15 21.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.13 7.40 7.69 0.00 0.64 1.09 12 E3_Da NovelBoundary 0 0.00 2.57 0.00 9.19 4.16 2.90 3.97 4.81 24.22 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.21 4.05 21.99 0.00 3.00 0.00 13 E3a_E4a KnownJunction 0 0.00 5.66 2.42 8.52 6.45 2.50 3.71 3.33 30.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.62 4.61 9.27 0.00 3.06 0.00 14 E3a_E5a NovelJunction 0 0.00 0.00 8.01 7.23 15.70 5.68 4.24 3.57 4.77 4.19 0.00 0.00 0.00 0.00 0.00 0.00 4.77 11.36 4.33 18.41 2.59 3.00 0.00 15 E4_Aa NovelBoundary 0 0.00 35.32 1.83 5.66 0.00 2.84 1.99 4.23 41.35 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 32.29 0.00 17.45 0.00 0.00 0.00 16 ER4a ExonRegion 0 1.59 49.05 4.13 11.12 9.25 11.38 10.38 9.66 45.94 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.00 38.45 51.67 47.53 4.96 0.98 0.00 17 E4a_E5a KnownJunction 0 0.00 14.14 16.68 35.33 0.00 7.38 13.82 12.90 69.79 8.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.92 51.01 45.89 2.35 0.00 0.00 18 I4 Intron 0 1.98 9.05 3.82 8.74 8.03 1.54 6.48 6.27 10.23 1.35 0.14 0.37 0.10 0.71 0.26 0.07 0.57 13.31 8.62 23.04 2.17 2.82 1.01 19 I4_SR1 SilentIntronRegion 0 1.98 9.07 3.82 8.76 8.04 1.54 6.49 6.28 10.25 1.35 0.14 0.37 0.10 0.72 0.26 0.07 0.57 13.33 8.63 23.07 2.17 2.82 1.01 20 Ix Intron 0 1.30 3.24 9.95 33.55 7.09 2.39 6.45 9.04 9.17 3.11 0.17 0.67 0.00 0.28 0.00 0.07 0.12 3.57 3.68 17.58 0.89 1.38 1.48 21 Ix_SR1 SilentIntronRegion 0 1.73 5.26 8.71 31.41 8.09 2.24 7.24 13.77 10.59 2.98 0.11 0.68 0.00 0.59 0.00 0.16 0.18 4.32 3.92 16.92 0.54 1.81 0.96 22 Ix_AR2 ActiveIntronRegion 0 2.21 0.49 11.43 67.65 14.22 4.75 11.50 13.56 11.01 3.98 0.51 0.18 0.00 0.00 0.00 0.00 0.00 2.28 2.43 25.48 0.52 0.87 2.58 23 Ix_SR2 SilentIntronRegion 0 0.54 1.33 11.45 30.05 4.72 2.04 4.59 3.39 7.62 3.21 0.16 0.80 0.00 0.00 0.00 0.00 0.09 2.58 3.03 17.32 1.32 0.94 1.86 24 I4 Intron 0 1.52 5.28 7.02 23.02 8.19 6.79 9.72 11.91 16.65 5.97 0.00 0.86 0.13 0.11 0.00 0.02 0.48 9.88 6.99 32.47 1.94 1.74 2.16 25 I4_AR2 ActiveIntronRegion 0 0.00 1.35 3.54 8.67 2.95 4.11 7.31 3.77 7.21 4.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.73 1.10 21.62 0.74 0.69 0.00 26 I4_AR3 ActiveIntronRegion 0 0.00 2.92 1.16 9.08 4.26 3.80 5.06 7.80 6.75 1.91 0.00 1.14 0.00 0.21 0.00 0.00 0.00 3.66 1.52 20.01 1.40 0.66 0.94 27 I4_SR4 SilentIntronRegion 0 0.66 4.32 2.67 14.74 4.85 4.02 9.36 9.83 15.16 3.54 0.00 1.66 0.14 0.04 0.00 0.09 0.80 9.49 7.61 35.54 1.74 1.08 2.32 28 I4_AR4 ActiveIntronRegion 0 0.37 3.28 3.44 15.05 3.58 5.30 7.62 5.81 13.82 3.91 0.00 1.75 0.00 0.13 0.00 0.00 0.66 9.38 4.61 25.05 1.10 0.63 2.04 29 I4_SR5 SilentIntronRegion 0 1.22 5.34 6.68 22.30 8.48 7.18 11.57 12.21 15.26 7.61 0.00 0.18 0.20 0.08 0.00 0.00 0.60 9.50 6.88 33.26 1.73 2.69 2.07 30 I4_AR5 ActiveIntronRegion 0 6.36 14.50 31.47 56.42 20.79 16.06 18.49 28.75 31.67 13.62 0.00 0.00 0.00 0.21 0.00 0.00 1.06 16.55 13.48 48.88 4.14 2.35 5.08 31 I4_SR6 SilentIntronRegion 0 3.90 8.74 13.54 45.66 16.93 12.04 11.57 18.74 28.43 8.80 0.00 1.18 0.18 0.25 0.00 0.00 0.00 16.32 10.53 40.59 2.50 2.46 3.05 32 E5_Aa NovelBoundary 0 16.52 31.05 28.77 90.17 60.95 40.72 12.54 35.32 122.63 56.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.65 26.64 48.26 27.86 6.25 12.04 33 ER5a ExonRegion 0 0.00 4.07 1.82 4.13 0.00 0.05 5.47 2.80 16.06 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 7.64 20.75 18.11 0.00 0.00 0.00