Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP2R2A Gene 0 85.81 209.97 64.09 101.08 83.56 123.19 99.35 59.69 49.73 91.85 181.22 256.90 225.75 151.26 127.43 123.97 153.96 50.87 52.61 81.64 47.59 111.40 52.32 2 380737 Transcript 1 9.89 95.90 22.51 36.75 14.31 25.33 27.06 26.17 22.88 34.18 81.09 21.67 55.73 75.38 51.37 54.21 74.32 52.05 34.77 85.13 38.76 31.72 32.08 3 315985 Transcript 0 1.44 0.00 0.00 0.00 1.78 0.00 0.82 2.01 0.00 0.00 0.18 0.00 0.00 0.18 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 5.34 27.75 7.56 9.47 9.68 20.40 9.39 7.65 7.01 12.80 36.99 6.12 13.57 36.40 23.26 26.30 40.08 15.76 11.29 29.39 33.91 13.90 8.58 5 E1a_E3a KnownJunction 0 14.45 164.05 37.46 64.03 18.93 30.27 44.74 44.69 38.74 55.55 125.19 37.21 97.88 114.37 79.49 82.12 108.56 88.34 58.26 140.87 43.61 49.54 55.57 6 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.37 0.00 0.00 0.35 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2a_E3a KnownJunction 0 2.89 0.00 0.00 0.00 3.57 0.00 1.63 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 0 29.57 157.05 43.39 101.11 43.56 57.31 30.72 59.67 55.14 100.10 231.97 135.89 166.34 156.89 118.56 137.43 211.39 59.74 54.24 128.31 95.70 106.73 67.70 9 E3a_E4a KnownJunction 0 33.49 176.55 70.43 137.91 31.66 88.24 25.04 75.95 64.99 134.93 289.65 262.59 285.70 190.54 121.39 171.41 232.26 40.33 22.87 141.96 85.75 108.02 28.26 10 Ix_AR6 ActiveIntronRegion 0 4.62 6.27 11.50 5.28 7.43 1.31 23.86 6.00 5.57 4.00 2.45 21.29 13.78 0.93 1.78 15.83 16.17 0.04 3.71 7.29 2.65 0.00 2.04 11 Ix_AR8 ActiveIntronRegion 0 16.89 25.20 17.39 19.92 15.30 1.31 15.18 7.29 3.46 3.60 0.67 11.77 7.38 0.60 6.20 6.01 5.73 2.37 3.33 5.42 0.00 0.21 3.56 12 Ix_SR6 SilentIntronRegion 0 27.23 23.83 13.84 22.40 17.21 2.11 20.99 12.43 1.69 5.50 1.33 13.22 8.94 0.57 2.55 9.56 6.07 7.17 3.66 6.35 1.01 0.00 8.10 13 Ix_AR9 ActiveIntronRegion 0 32.13 17.56 21.98 23.69 14.76 1.42 12.42 4.09 1.38 6.15 2.81 10.63 20.39 1.28 0.00 7.43 4.90 4.14 3.86 4.58 3.41 1.55 6.50 14 Ix_AR10 ActiveIntronRegion 0 8.10 9.61 11.42 16.85 10.47 2.23 22.49 7.48 2.79 4.33 2.80 18.81 12.13 1.12 1.69 6.15 6.37 3.10 2.10 6.56 2.30 0.62 2.55 15 ER4a ExonRegion 0 39.20 327.09 73.32 118.81 48.87 95.75 88.12 73.78 62.99 125.41 271.28 310.66 263.17 215.83 160.49 141.39 215.80 60.30 54.05 150.82 67.93 129.31 60.41 16 E4a_E5a KnownJunction 0 54.97 444.92 78.38 182.83 94.82 93.70 105.99 61.32 67.19 117.36 214.26 311.20 359.88 162.52 204.34 120.99 137.73 86.80 96.66 125.79 47.51 134.29 92.19 17 Ix_AR3 ActiveIntronRegion 0 4.39 5.00 4.84 10.28 3.98 4.75 15.38 5.18 4.18 5.81 10.89 10.27 12.39 6.18 3.01 5.19 10.64 7.93 3.86 5.30 10.08 7.49 4.50 18 Ix_SR5 SilentIntronRegion 0 4.56 6.58 2.59 5.29 6.64 8.22 20.31 7.46 7.14 4.23 7.94 19.44 19.96 5.40 3.58 8.39 10.10 4.22 3.78 4.77 1.27 7.31 1.28 19 Ix_SR6 SilentIntronRegion 0 12.70 8.01 4.14 17.63 6.27 11.06 31.98 10.32 2.01 9.32 8.58 34.50 15.10 5.02 4.53 8.27 2.37 6.18 2.79 2.93 1.86 18.10 5.05 20 Ix_AR5 ActiveIntronRegion 0 18.60 5.56 1.97 8.07 8.47 8.44 15.35 8.27 4.83 4.59 5.09 15.29 31.33 3.37 3.91 2.07 1.26 5.45 3.49 3.22 0.84 12.74 3.23 21 E5_Aa NovelBoundary 0 23.63 35.39 19.22 11.89 0.00 10.90 23.05 18.61 7.00 3.33 4.79 12.45 39.93 2.30 4.45 3.50 0.00 6.59 0.00 10.23 0.00 3.12 7.51 22 ER5a ExonRegion 0 84.02 380.49 107.56 185.11 132.09 173.13 138.20 112.14 92.80 161.99 287.19 580.17 538.99 260.20 231.19 182.16 252.28 65.42 89.80 162.82 45.79 233.27 85.18 23 E5a_E6a KnownJunction 0 130.17 530.50 128.14 197.91 174.87 319.42 283.83 145.40 98.00 213.77 274.86 597.19 536.49 249.63 311.02 144.32 252.64 63.51 85.65 182.74 33.55 209.91 99.36 24 ER6a ExonRegion 0 117.46 495.83 122.45 188.30 152.54 242.37 203.52 123.90 98.43 199.52 382.00 482.72 535.83 302.39 233.51 184.30 303.33 82.00 93.84 161.40 70.89 261.05 96.65 25 E6a_E7a KnownJunction 0 79.13 451.96 126.73 190.32 156.79 208.06 195.95 109.22 86.60 177.34 369.15 476.56 411.34 275.94 165.52 198.07 308.74 76.73 148.52 167.02 71.85 254.67 62.66 26 E6a_E10a NovelJunction 0 0.00 25.32 0.00 2.76 0.00 0.00 2.25 0.00 3.59 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 5.94 0.00 0.00 0.00 27 ER7a ExonRegion 0 113.69 251.27 132.18 180.97 166.62 231.88 190.15 127.68 110.15 208.29 503.64 597.00 517.70 374.92 268.25 277.89 413.35 97.79 136.67 158.80 112.30 263.74 126.66 28 E7a_E8a KnownJunction 0 129.21 153.53 123.53 190.12 168.51 239.58 187.12 111.02 87.61 177.26 351.14 567.63 510.19 311.32 320.05 276.42 412.72 102.31 150.03 117.10 116.88 244.02 133.25 29 Ix_SR1 SilentIntronRegion 0 19.84 8.55 6.73 11.45 9.86 11.38 21.56 5.06 4.88 5.14 5.96 25.23 13.96 18.00 9.87 14.47 9.76 0.89 4.18 14.76 0.00 13.43 1.70 30 Ix_AR1 ActiveIntronRegion 0 15.05 7.46 12.25 8.93 23.49 9.78 30.45 5.19 2.61 3.57 9.45 43.29 6.77 29.05 15.80 26.42 6.60 3.70 22.30 18.20 0.00 13.43 8.48 31 Ix_SR2 SilentIntronRegion 0 5.96 4.77 6.33 4.06 19.33 9.39 18.18 2.08 0.83 0.98 5.33 15.02 5.07 22.11 10.89 24.75 6.20 2.34 10.53 5.91 0.00 5.40 4.85 32 Ix_AR2 ActiveIntronRegion 0 19.01 8.51 5.26 7.17 7.72 12.34 14.44 6.61 1.77 2.19 4.34 2.29 16.37 25.39 8.54 13.35 6.35 1.77 3.05 9.54 0.00 1.34 5.65 33 E8_Aa NovelBoundary 0 69.72 18.42 14.01 15.92 7.81 11.07 35.82 0.00 1.50 11.12 5.00 0.00 45.45 16.36 8.90 22.39 8.60 4.06 0.00 19.94 0.00 14.08 0.00 34 ER8a ExonRegion 0 199.29 338.60 113.79 182.42 187.51 262.02 217.23 116.23 103.89 186.10 447.78 656.29 490.72 350.14 258.25 310.99 414.09 118.40 132.24 150.32 140.60 236.26 124.92 35 E8_Da NovelBoundary 0 24.23 30.39 11.80 7.16 34.63 21.07 43.85 11.79 11.60 17.27 12.63 37.81 41.72 27.02 29.30 43.66 22.44 10.78 28.71 24.93 5.50 19.41 8.71 36 E8a_E9a KnownJunction 0 271.16 533.06 156.29 270.13 260.95 357.63 241.79 125.07 104.11 190.45 385.20 631.11 541.04 351.05 299.40 351.02 281.25 111.55 152.19 143.05 145.24 189.46 143.41 37 E8a_E10a NovelJunction 1 6.08 15.26 14.25 6.66 4.16 0.00 23.41 9.00 6.28 1.24 0.00 0.00 0.00 0.00 19.66 8.29 8.60 13.51 4.52 0.00 3.15 6.18 6.83 38 Ix Intron 0 36.11 38.10 10.31 19.28 41.84 20.59 38.28 8.47 10.39 14.00 21.95 21.99 20.01 28.11 13.47 30.80 23.35 14.20 20.55 12.67 13.53 17.58 17.31 39 Ix_AR1 ActiveIntronRegion 0 36.16 38.15 10.32 19.30 41.89 20.62 38.33 8.48 10.40 14.01 21.97 22.02 20.03 28.14 13.48 30.83 23.38 14.22 20.58 12.69 13.54 17.60 17.33 40 E9_Aa NovelBoundary 0 97.50 111.82 16.74 21.81 64.26 70.19 108.73 12.08 13.02 17.62 30.85 32.41 12.50 24.37 27.69 12.73 34.69 7.01 13.27 22.95 12.36 21.19 12.29 41 ER9a ExonRegion 0 256.83 528.71 167.97 292.89 300.93 357.02 313.20 136.13 117.82 212.06 416.69 710.85 583.14 337.45 335.25 311.16 334.17 109.40 124.74 194.22 83.33 271.73 111.80 42 E9a_E10a KnownJunction 0 354.29 542.34 225.83 394.36 405.18 479.61 331.66 159.53 125.46 263.25 436.64 615.05 587.95 443.88 452.69 372.64 405.98 112.67 117.37 243.46 65.85 292.51 96.72 43 Ix Intron 0 11.84 27.50 7.32 12.08 12.61 18.49 19.94 6.81 12.65 10.01 9.70 11.86 10.56 12.75 8.64 14.66 16.14 17.05 7.15 14.62 11.84 17.34 7.63 44 Ix_AR1 ActiveIntronRegion 0 11.03 21.97 6.97 10.80 13.93 19.58 22.86 6.26 13.54 10.47 11.18 8.85 8.67 14.08 9.64 17.22 20.44 22.66 7.52 16.46 15.78 15.18 8.40 45 Ix_SR1 SilentIntronRegion 0 13.92 53.54 4.08 10.24 10.98 15.31 9.56 4.27 5.94 5.34 5.94 13.13 9.13 8.12 5.88 8.68 5.11 3.90 6.68 9.54 2.94 10.49 6.62 46 Ix_AR2 ActiveIntronRegion 0 13.75 30.44 11.45 19.10 8.43 16.61 16.06 11.25 14.34 11.90 6.53 23.76 19.84 10.95 6.70 8.73 6.84 3.92 6.04 11.02 2.35 32.18 5.23 47 E10_Aa NovelBoundary 0 52.23 27.89 15.61 36.89 23.34 36.51 43.59 17.37 11.05 15.77 14.64 12.60 6.33 9.18 23.12 21.19 0.00 2.49 0.00 3.26 2.72 8.33 8.37 48 ER10a ExonRegion 0 181.08 433.33 181.77 290.13 190.01 300.60 216.71 152.59 118.24 226.81 297.10 457.51 338.09 246.76 259.03 252.66 236.27 124.64 91.72 171.65 71.31 216.87 90.56 49 E10a_E11a KnownJunction 0 347.25 713.82 267.17 390.79 351.10 470.01 352.60 217.12 167.30 277.70 461.54 652.71 493.31 568.78 655.30 498.07 365.31 204.28 186.83 252.15 151.17 360.67 226.55 50 E11_Aa NovelBoundary 0 74.90 26.97 31.67 19.61 53.06 13.17 24.20 23.45 9.20 21.87 12.11 0.00 0.00 7.00 15.95 3.67 8.70 11.28 0.00 8.50 11.74 14.08 0.00 51 ER11a ExonRegion 0 57.71 102.19 21.79 29.65 21.10 46.76 35.83 17.43 12.70 22.55 26.88 45.62 45.94 36.89 37.99 37.27 23.45 19.72 12.12 15.30 10.36 22.07 16.37