Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA1967 Gene 0 129.30 168.70 268.61 246.31 149.31 263.20 149.82 215.41 165.14 438.24 427.31 102.29 91.14 387.76 344.98 386.37 294.97 353.05 300.60 238.54 197.34 154.41 158.31 2 308511 Transcript 1 69.47 100.98 79.27 43.61 74.77 223.16 123.67 60.87 55.78 152.14 211.44 13.87 12.27 88.29 85.61 165.99 150.07 185.72 270.16 126.80 72.37 59.28 70.47 3 389279 Transcript 0 4.79 6.93 11.29 1.68 3.94 16.66 8.41 15.54 13.62 48.03 52.32 6.75 8.56 48.10 30.16 24.80 24.41 15.71 16.01 20.30 28.58 13.04 8.98 4 413738 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 1 41.37 52.32 40.35 22.47 36.73 112.71 63.54 24.97 25.60 81.19 118.69 4.64 12.03 90.89 93.10 118.61 86.12 69.32 166.09 68.24 38.00 31.06 46.87 6 E1a_E3a KnownJunction 1 97.57 149.64 118.18 64.76 112.82 333.61 183.81 96.77 85.97 223.09 304.18 23.11 12.50 85.70 78.13 213.36 214.03 302.11 374.22 185.36 106.75 87.50 94.07 7 E1a_E4a NovelJunction 0 0.00 2.63 1.83 0.00 0.00 9.31 5.43 2.55 0.00 3.22 0.00 0.00 0.00 0.00 0.00 4.10 0.00 2.57 13.65 0.00 0.00 0.00 4.35 8 ER2a ExonRegion 0 2.92 1.88 8.67 1.70 4.06 8.96 7.95 9.39 10.06 31.38 38.56 7.19 4.47 30.57 34.36 22.25 16.75 15.71 19.78 16.81 24.24 13.16 13.60 9 E2a_E3a KnownJunction 0 6.67 11.97 13.90 1.66 3.82 24.36 8.88 21.69 17.19 64.68 66.07 6.30 12.66 65.63 25.96 27.34 32.07 15.71 12.24 23.78 32.93 12.92 4.35 10 ER3a ExonRegion 0 33.93 46.56 88.99 44.29 40.33 85.29 61.36 98.00 86.19 231.16 331.11 87.04 67.13 182.07 115.36 128.70 217.17 146.40 124.23 136.64 182.15 57.86 53.04 11 E3a_E4a KnownJunction 1 33.86 25.06 114.43 66.46 41.00 54.63 24.11 106.30 117.01 347.94 728.24 97.08 67.37 238.04 192.10 194.39 512.39 135.59 131.11 248.45 347.99 101.28 70.85 12 ER4a ExonRegion 0 28.55 36.56 193.08 103.93 42.78 88.82 43.22 164.35 156.31 421.39 568.08 98.21 97.47 404.25 387.38 473.86 383.44 395.74 544.45 311.03 223.63 169.99 227.30 13 E4a_E5a KnownJunction 1 36.08 49.93 219.09 152.10 35.74 186.54 93.62 212.76 162.32 436.88 387.05 116.14 107.14 342.05 385.81 557.38 195.23 561.61 384.48 307.38 162.60 142.74 182.68 14 ER5a ExonRegion 0 25.49 62.49 195.03 131.16 143.71 278.24 133.46 188.63 166.50 458.86 600.73 115.91 94.57 388.41 298.39 354.88 393.17 415.12 321.13 274.56 223.63 135.66 125.03 15 E5a_E6a KnownJunction 0 35.78 125.70 207.41 141.44 145.67 437.36 208.23 183.89 156.74 459.31 546.88 200.47 112.33 400.85 436.49 432.28 352.31 469.83 464.01 314.34 222.46 141.88 124.54 16 ER6a ExonRegion 0 67.38 144.35 239.92 201.99 99.77 298.21 162.29 259.90 195.41 607.00 724.85 202.32 151.30 503.36 485.77 619.24 474.47 559.47 619.79 361.81 281.00 248.94 232.99 17 E6a_E7a KnownJunction 0 164.77 159.25 256.44 140.54 81.66 185.35 90.67 264.43 197.48 691.94 795.46 230.48 168.01 591.62 477.53 458.51 582.05 422.49 389.28 345.98 366.15 205.50 162.62 18 ER7a ExonRegion 0 84.06 130.57 185.82 165.73 82.25 233.46 101.51 250.12 188.08 556.11 626.38 166.02 153.00 522.02 367.59 476.36 447.70 546.52 558.22 303.65 281.85 202.69 191.33 19 E7a_E8a KnownJunction 0 253.82 154.31 223.53 250.02 205.26 445.08 237.42 265.42 223.35 700.99 721.71 200.02 162.65 476.49 640.34 971.88 463.58 857.50 943.37 456.88 298.01 310.21 399.93 20 ER8a ExonRegion 0 80.89 118.72 177.82 149.10 136.77 294.86 149.87 205.12 164.60 469.43 534.28 160.86 158.59 519.67 382.46 594.15 372.56 482.74 467.03 268.61 237.18 181.80 174.11 21 E8_Da NovelBoundary 0 17.11 6.25 13.63 22.08 12.14 24.25 24.11 38.98 41.64 59.18 26.64 5.25 53.73 23.60 33.25 20.08 34.78 53.10 58.35 60.72 37.07 3.12 41.06 22 E8a_E9a KnownJunction 0 44.01 104.32 160.31 129.15 79.37 295.68 127.76 200.19 142.79 385.50 467.59 129.34 127.43 528.70 423.76 488.25 382.70 305.47 349.94 237.52 196.02 133.06 131.80 23 I8 Intron 0 24.00 25.76 17.43 42.59 40.88 34.20 39.84 35.28 30.14 45.13 25.91 30.24 36.24 27.43 23.49 33.64 30.68 40.42 41.22 46.63 24.04 29.64 35.65 24 I8_AR1 ActiveIntronRegion 0 27.68 36.26 21.20 42.87 41.02 29.47 46.18 43.79 35.51 44.78 28.31 43.16 49.60 28.62 28.47 31.83 35.73 54.03 46.51 56.65 19.58 34.36 45.65 25 I8_SR2 SilentIntronRegion 0 14.71 20.82 13.04 29.35 27.90 23.85 32.55 22.82 21.11 34.72 27.06 18.58 23.99 21.11 20.65 31.72 26.51 28.55 39.36 33.37 17.84 21.64 25.05 26 I8_AR2 ActiveIntronRegion 0 35.07 21.28 19.38 51.91 49.82 42.26 49.44 35.89 33.69 52.68 28.03 35.31 37.62 33.00 21.65 34.41 38.47 37.71 44.00 55.87 28.73 30.43 35.44 27 I8_SR3 SilentIntronRegion 1 60.96 32.23 21.87 66.44 55.39 30.62 57.53 53.50 40.94 66.12 44.94 50.44 19.93 32.81 25.97 47.70 31.69 54.88 41.73 71.49 39.56 31.57 44.05 28 I8_AR3 ActiveIntronRegion 0 30.66 33.70 28.02 69.05 50.30 55.82 51.50 59.37 48.77 69.02 36.56 39.27 48.02 43.72 33.47 54.91 44.69 74.90 63.66 73.60 49.12 37.58 54.63 29 I8_SR4 SilentIntronRegion 0 16.25 18.43 10.22 31.99 39.66 28.59 28.01 22.43 19.51 37.16 15.07 19.03 28.49 15.77 14.48 24.20 15.92 15.39 24.05 22.32 12.13 27.00 20.87 30 I8_AR4 ActiveIntronRegion 0 12.55 16.59 0.00 0.00 31.64 14.91 14.62 0.00 0.00 0.00 11.35 13.68 11.42 16.83 23.55 6.55 14.59 5.46 7.06 28.28 6.45 24.58 28.17 31 E9_Aa NovelBoundary 0 225.37 93.08 96.42 123.69 205.18 154.23 153.55 118.95 74.54 126.60 60.12 76.98 69.48 56.45 84.68 85.28 50.86 54.30 126.12 65.13 46.64 69.68 56.00 32 ER9a ExonRegion 0 85.81 137.57 226.53 191.00 120.61 295.21 152.69 217.84 182.62 458.66 500.27 148.65 142.77 480.09 325.40 452.33 360.68 419.85 340.12 262.98 238.04 182.22 170.99 33 E9_Da NovelBoundary 0 34.23 35.72 67.89 119.47 74.96 55.59 51.27 75.99 55.41 110.75 16.43 24.31 40.58 33.73 46.11 67.25 37.68 74.57 64.28 79.90 34.22 78.13 39.18 34 E9a_E10a KnownJunction 0 79.13 111.56 189.56 190.32 120.20 264.51 144.06 200.85 176.71 437.45 369.62 66.62 69.15 386.25 270.35 434.25 281.72 351.03 308.90 238.09 222.27 143.29 124.20 35 I9 Intron 0 60.00 57.99 44.40 88.24 73.17 73.50 76.41 64.37 48.17 74.55 24.98 37.30 36.93 20.03 20.56 34.90 18.27 37.01 55.59 43.90 15.53 51.38 31.04 36 I9_AR1 ActiveIntronRegion 0 72.57 71.48 57.43 114.14 88.23 90.70 91.94 83.25 62.29 96.44 31.87 44.49 47.78 20.66 19.47 42.52 20.76 47.07 64.99 53.54 17.22 59.68 33.75 37 E10_Aa NovelBoundary 0 55.49 139.19 70.96 147.60 77.50 82.28 86.69 122.24 48.18 127.16 41.38 31.06 26.62 28.72 35.35 49.47 30.57 73.04 89.98 53.05 19.46 43.97 69.06 38 ER10a ExonRegion 0 118.91 179.70 282.24 233.09 184.11 301.15 171.11 246.72 223.47 526.63 505.54 117.81 152.60 517.12 342.37 486.51 390.73 447.44 369.77 288.97 266.98 170.44 194.73 39 E10_Da NovelBoundary 0 53.27 50.78 46.66 47.81 91.26 34.30 57.23 52.99 32.75 63.45 25.59 18.01 14.93 24.13 13.23 19.99 34.60 39.92 21.46 40.59 46.95 13.90 32.35 40 E10a_E11a KnownJunction 0 128.99 138.20 224.86 218.19 159.00 263.20 158.90 195.31 189.15 497.78 467.43 131.74 104.21 505.56 308.05 413.99 369.80 377.35 259.02 287.12 234.51 149.47 182.42 41 E11_Aa NovelBoundary 0 60.16 47.56 46.24 53.37 46.60 23.00 26.54 60.99 34.00 84.53 21.74 30.46 21.43 11.48 28.93 26.92 22.07 67.94 12.52 37.78 48.25 21.00 32.18 42 ER11a ExonRegion 0 164.07 180.63 323.09 245.59 156.16 281.86 183.58 209.11 199.60 534.57 598.96 146.94 145.51 559.82 423.40 466.62 413.65 472.04 327.87 280.81 283.76 166.19 188.59 43 E11_Da NovelBoundary 0 38.15 56.50 70.96 103.52 83.19 63.49 63.20 66.95 66.64 101.43 29.80 17.71 6.82 31.37 34.12 62.97 15.61 75.36 61.37 50.17 43.00 52.78 50.19 44 E11a_E12a KnownJunction 0 175.36 221.67 350.17 233.67 130.22 323.56 160.53 227.80 175.03 501.27 639.95 136.24 167.20 687.10 530.81 407.50 435.16 439.53 309.37 268.00 264.90 145.18 115.58 45 I11 Intron 0 45.57 36.01 58.55 67.92 51.89 47.60 36.39 65.68 48.05 82.99 30.69 15.94 11.50 28.46 36.04 52.64 36.79 71.40 57.88 49.38 42.71 52.81 52.91 46 I11_AR1 ActiveIntronRegion 0 45.84 36.23 58.90 68.32 52.20 47.89 36.60 66.08 48.34 83.48 30.88 16.04 11.56 28.62 36.26 52.96 37.02 71.81 58.23 49.67 42.96 53.13 53.23 47 E12_Aa NovelBoundary 0 66.90 35.91 91.90 62.13 71.14 53.61 59.97 74.51 65.83 133.34 35.54 0.00 25.00 25.02 24.48 46.83 43.10 78.47 49.51 54.52 39.48 27.86 68.21 48 ER12a ExonRegion 0 100.57 144.00 289.76 239.24 103.39 307.16 146.91 220.00 189.77 542.19 472.46 146.67 121.48 455.83 409.48 400.77 302.07 439.75 280.02 271.51 228.12 160.62 180.50 49 E12_Da NovelBoundary 0 50.53 35.13 94.53 80.04 30.73 27.60 20.14 57.18 71.24 103.18 23.74 12.45 6.82 26.61 36.96 56.14 44.13 75.07 56.00 57.78 33.85 41.52 42.25 50 E12a_E13a KnownJunction 0 64.09 77.22 273.97 203.24 72.33 208.23 98.13 180.11 153.99 467.91 381.52 124.39 92.53 363.00 349.84 250.36 232.54 304.14 226.27 284.37 157.59 137.41 103.63 51 I12 Intron 0 55.12 33.10 63.41 56.32 45.17 48.42 41.98 57.45 47.05 92.32 40.55 16.61 12.71 36.85 41.80 63.43 36.61 88.38 60.30 51.05 45.42 36.42 53.82 52 I12_AR1 ActiveIntronRegion 0 55.38 33.25 63.71 56.59 45.37 48.64 42.18 57.72 47.27 92.74 40.74 16.69 12.77 37.02 42.00 63.73 36.79 88.80 60.58 51.29 45.63 36.60 54.07 53 E13_Aa NovelBoundary 0 47.79 39.86 104.08 66.79 69.19 74.73 61.17 96.40 66.00 139.57 46.91 19.36 13.15 63.63 53.77 57.42 26.93 122.33 35.86 44.29 66.53 7.78 82.03 54 ER13a ExonRegion 0 73.46 139.62 292.24 256.92 96.48 215.13 129.02 245.22 203.63 561.07 472.74 165.63 144.87 472.36 472.23 486.34 337.17 352.39 331.65 294.04 226.15 216.95 195.80 55 E13a_E14a KnownJunction 0 124.32 193.91 252.00 199.24 165.11 245.71 148.65 205.21 211.43 579.12 568.62 130.09 136.03 401.56 369.12 277.53 449.46 326.90 161.13 223.52 245.01 119.90 138.89 56 ER14a ExonRegion 0 170.94 253.34 350.56 345.90 197.79 356.18 210.93 310.69 240.26 583.77 533.42 202.30 197.65 536.72 447.68 542.25 425.80 444.08 399.15 322.89 260.22 238.29 257.78 57 E14_Da NovelBoundary 0 41.79 41.44 47.28 25.67 60.36 18.51 51.23 43.21 24.45 52.33 7.90 6.15 0.00 7.12 10.51 32.64 18.14 27.77 49.32 37.90 16.80 39.68 32.01 58 E14a_E15a KnownJunction 0 214.85 258.44 355.96 371.11 281.32 285.63 266.17 272.16 211.75 546.02 529.19 235.43 261.35 631.18 562.71 560.54 403.93 431.45 555.22 360.68 257.24 195.09 209.57 59 ER15a ExonRegion 0 205.69 263.89 374.06 351.19 251.65 337.17 217.77 270.88 197.04 544.53 475.46 154.56 162.35 507.08 390.94 456.37 394.95 453.41 384.79 257.73 235.98 214.19 199.01 60 E15_Ab KnownBoundary 0 280.64 372.96 455.28 385.30 331.66 430.66 262.72 312.53 219.76 596.44 452.17 191.01 89.44 448.82 382.72 476.63 411.13 462.62 435.59 286.80 218.38 204.27 210.33 61 ER15b ExonRegion 0 171.37 308.72 302.02 293.84 253.36 382.78 221.20 233.88 167.36 500.59 419.82 147.62 136.04 464.02 317.06 391.33 335.39 363.33 365.87 263.32 241.01 171.28 165.86 62 E15a_E16a KnownJunction 0 149.29 255.15 311.67 351.44 258.91 302.04 192.11 247.31 145.43 450.23 403.73 189.66 100.32 446.94 422.15 478.85 259.47 471.70 289.04 287.05 236.36 163.74 175.76 63 E16_Aa NovelBoundary 0 24.52 46.04 55.73 34.46 80.14 53.61 48.05 65.10 39.18 71.24 10.11 0.00 6.82 19.01 9.27 18.88 9.07 30.68 22.31 27.16 24.96 34.54 26.97 64 ER16a ExonRegion 0 147.05 252.32 342.71 398.57 309.35 357.16 216.95 292.20 205.74 560.80 548.22 148.69 91.08 532.05 382.49 491.43 378.85 492.55 404.63 304.37 291.35 209.98 207.12 65 E16_Da NovelBoundary 0 66.23 40.39 58.34 47.41 70.20 47.42 61.65 57.05 34.61 72.02 10.06 6.30 12.66 19.31 17.80 22.73 25.15 36.02 49.79 38.22 23.97 27.68 50.96 66 E16a_E17a KnownJunction 0 202.04 285.54 358.68 429.88 353.40 510.90 259.90 280.29 183.77 485.85 590.36 99.18 73.86 430.46 358.12 495.85 354.00 427.09 296.48 311.40 271.33 197.23 201.03 67 I16 Intron 0 40.38 44.34 31.27 30.05 17.71 9.99 27.83 39.13 29.38 23.29 7.53 8.33 4.51 8.29 11.49 8.10 15.42 17.89 24.80 17.39 18.87 28.39 23.99 68 I16_SR1 SilentIntronRegion 0 40.97 45.02 31.76 30.50 17.94 10.15 28.21 39.71 29.83 23.63 7.64 8.46 4.58 8.42 11.65 8.23 15.66 18.15 25.19 17.66 19.17 28.83 24.36 69 E17_Aa NovelBoundary 0 57.42 86.43 63.92 61.70 26.57 31.69 40.50 87.08 51.88 90.07 14.85 24.76 0.00 36.08 33.01 23.58 40.95 84.94 36.99 38.54 41.08 27.07 35.17 70 ER17a ExonRegion 0 159.68 295.85 380.12 398.82 263.77 454.14 249.64 273.70 212.51 560.13 621.32 105.05 83.40 499.62 424.53 547.66 415.00 515.83 396.10 338.12 285.37 204.01 196.15 71 E17_Da NovelBoundary 0 12.59 36.70 79.83 72.48 39.56 49.06 26.54 104.78 50.38 116.39 13.37 24.91 0.00 21.60 19.78 46.91 16.46 81.54 72.10 25.44 43.43 81.38 59.24 72 E17a_E18a KnownJunction 0 216.11 230.42 400.28 385.90 314.52 442.13 277.17 345.43 243.95 642.51 613.68 119.29 106.00 518.87 478.40 521.74 405.33 512.90 474.27 383.95 244.64 259.63 211.19 73 E17a_E19a NovelJunction 0 3.78 0.00 0.00 0.00 0.00 8.23 1.77 0.00 0.00 0.00 12.32 7.65 0.00 2.47 25.59 16.49 3.65 0.00 0.00 0.00 0.00 0.00 0.00 74 I17 Intron 0 44.45 38.13 44.97 41.13 39.47 40.11 42.70 48.94 38.19 73.50 14.74 10.86 20.59 21.01 18.73 39.01 32.60 50.75 48.97 27.66 31.94 40.10 42.21 75 I17_AR1 ActiveIntronRegion 0 57.78 48.30 59.70 53.48 50.02 42.23 48.80 63.71 47.85 96.99 15.68 11.07 21.26 22.66 21.37 44.66 36.63 65.29 54.38 34.01 38.03 46.26 47.00 76 I17_SR1 SilentIntronRegion 0 29.36 13.66 22.62 25.62 19.21 21.25 25.53 23.40 15.42 29.14 9.32 6.11 19.84 17.66 9.60 17.99 30.72 19.61 53.91 21.22 19.89 22.28 28.91 77 I17_AR2 ActiveIntronRegion 0 16.03 21.56 15.65 15.38 20.24 42.50 34.12 20.83 22.31 30.22 14.64 12.35 19.50 18.33 15.68 33.02 23.34 25.45 33.78 13.95 21.10 31.56 35.59 78 E18_Aa NovelBoundary 0 81.13 70.58 84.24 61.50 47.45 58.43 55.73 83.79 49.45 98.23 15.79 12.60 0.00 21.13 28.56 63.74 22.35 68.36 92.99 19.81 28.91 42.01 46.61 79 ER18a ExonRegion 0 192.91 185.69 371.08 301.37 199.77 343.49 185.11 263.40 186.44 529.65 581.21 105.67 100.66 459.76 447.07 478.90 344.80 451.68 355.87 299.96 249.15 192.62 187.01 80 E18a_E19a KnownJunction 0 127.50 145.04 422.28 369.32 192.28 243.78 113.98 309.04 186.11 543.36 596.94 86.88 52.11 439.29 477.16 483.21 281.91 520.20 379.02 246.59 208.38 138.63 115.24 81 ER19a ExonRegion 0 118.35 136.58 344.95 270.90 131.09 238.69 130.27 219.96 181.47 454.52 458.79 54.81 50.12 412.19 423.58 379.74 282.96 362.84 246.13 247.00 199.99 131.89 139.91 82 E19a_E20a KnownJunction 0 170.33 201.08 361.70 287.11 114.52 338.67 129.09 230.26 157.26 444.51 453.59 69.47 71.59 497.50 466.90 559.00 288.45 529.19 223.82 251.77 177.98 110.53 198.38 83 E20_Aa NovelBoundary 0 44.01 8.42 22.41 35.29 21.14 17.77 34.71 21.03 24.36 47.81 9.11 6.30 6.01 21.84 22.25 27.60 20.48 33.74 12.61 20.52 13.41 13.53 60.44 84 ER20a ExonRegion 0 119.68 150.96 315.91 252.96 127.64 287.02 137.47 207.46 159.60 401.09 388.08 43.78 49.83 413.18 386.31 381.42 293.67 412.16 234.86 208.88 182.95 126.82 137.39 85 E20a_E21a KnownJunction 1 145.80 107.68 263.44 263.84 127.16 208.63 124.23 223.03 161.14 453.13 348.51 11.55 6.66 209.96 261.08 215.84 259.56 256.14 109.56 216.49 155.86 87.56 93.56 86 ER21a ExonRegion 0 123.85 126.72 238.93 166.29 93.21 173.62 107.73 137.08 102.78 323.54 283.79 32.37 29.55 303.72 325.10 232.62 210.95 189.45 153.45 152.63 135.08 96.40 104.51 87 E21_Da NovelBoundary 0 45.19 38.68 82.08 70.85 12.31 83.93 37.54 49.25 54.80 76.61 48.59 24.76 0.00 39.50 14.96 47.25 41.61 121.75 48.00 56.44 35.15 24.86 38.93 88 E21a_E22a KnownJunction 0 197.22 190.03 220.04 182.49 201.44 190.91 141.67 171.48 104.19 357.13 278.44 24.61 25.49 314.56 297.30 261.21 205.05 268.49 231.54 146.63 97.79 96.99 92.96 89 I21 Intron 0 33.60 16.55 44.59 32.25 10.09 23.30 18.39 42.44 28.88 46.48 29.93 5.56 6.92 21.77 25.30 33.62 28.82 74.90 31.62 29.99 27.99 22.33 39.04 90 I21_AR1 ActiveIntronRegion 0 33.86 16.68 44.94 32.51 10.17 23.48 18.54 42.77 29.11 46.84 30.16 5.60 6.97 21.94 25.50 33.88 29.05 75.48 31.87 30.23 28.21 22.50 39.35 91 E22_Aa NovelBoundary 0 67.27 40.85 85.66 82.07 39.56 45.43 58.25 56.35 37.62 77.12 22.53 12.45 6.82 38.38 41.29 86.64 13.74 96.09 44.42 46.40 48.68 27.56 28.77 92 ER22a ExonRegion 0 236.54 254.38 373.02 397.06 217.45 330.15 200.12 288.41 194.83 483.43 401.41 75.39 52.28 349.88 397.55 407.30 251.10 344.49 275.96 253.25 167.91 168.59 171.99