Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP3CC Gene 0 157.16 78.64 67.54 64.26 101.19 173.15 70.21 84.82 90.51 56.91 119.69 164.48 191.74 108.19 158.04 114.39 82.08 33.67 24.74 44.72 52.65 87.97 49.88 2 240139 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 289963 Transcript 1 98.39 31.84 47.40 17.65 16.55 20.27 34.89 14.29 17.94 15.69 58.91 45.16 61.03 25.13 132.64 21.45 26.37 25.58 16.94 8.31 48.50 63.87 56.85 4 397775 Transcript 0 0.08 0.00 0.08 0.20 0.10 1.24 0.03 0.04 0.02 0.06 0.21 0.00 0.41 0.24 0.07 0.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 6.70 5.28 8.05 4.64 8.67 29.58 9.25 10.32 21.54 10.79 26.54 3.60 4.40 41.30 39.39 19.45 15.04 11.17 3.57 13.60 24.47 12.79 18.14 6 E1a_E2a KnownJunction 0 25.12 23.55 33.00 23.11 32.26 141.85 68.85 44.98 74.97 29.17 87.65 18.76 34.09 94.18 109.03 81.77 56.66 21.18 3.76 41.42 65.18 30.98 44.47 7 I1_SR1 SilentIntronRegion 0 4.82 1.12 1.53 5.47 2.61 3.05 7.74 3.39 2.23 2.33 1.28 5.07 11.76 2.80 8.68 16.49 3.30 3.23 0.99 4.62 2.13 0.87 13.38 8 I1_AR3 ActiveIntronRegion 1 24.55 2.59 5.34 4.32 9.30 10.73 24.05 7.65 8.10 8.20 2.11 37.59 32.24 0.78 14.87 13.99 11.36 1.03 4.67 10.99 0.94 2.53 12.19 9 I1_AR6 ActiveIntronRegion 0 22.17 8.32 7.62 12.48 13.79 17.04 16.66 15.26 19.04 9.63 2.08 19.58 12.92 0.22 15.18 15.18 3.05 0.00 1.18 7.17 0.54 3.33 2.98 10 ER2a ExonRegion 0 58.50 35.56 46.58 38.77 47.79 132.88 51.37 75.89 94.79 45.40 141.02 119.15 114.10 114.75 131.70 90.09 113.11 29.55 12.64 51.40 39.86 84.44 54.08 11 E2a_E3a KnownJunction 0 75.57 50.19 44.59 46.15 75.13 114.82 53.04 84.61 134.69 61.68 170.36 170.31 162.49 124.26 153.16 124.58 153.62 27.48 13.74 68.58 25.27 103.30 69.40 12 ER3a ExonRegion 0 100.95 80.99 67.36 65.84 67.19 150.46 65.10 92.52 113.60 59.75 168.89 234.76 190.68 105.72 152.91 109.61 119.47 18.65 17.00 73.74 38.82 120.19 52.65 13 E3a_E4a KnownJunction 0 113.65 114.19 69.54 74.38 93.55 173.71 88.50 93.11 104.34 58.91 137.88 218.62 199.99 83.23 117.44 115.10 99.58 17.04 35.58 87.31 13.47 183.88 47.21 14 E3a_E5a NovelJunction 0 14.00 6.18 0.00 0.00 0.00 0.00 2.25 0.00 6.13 1.16 4.84 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 3.67 15 I3_AR4 ActiveIntronRegion 0 11.78 3.75 2.94 5.44 7.33 5.42 19.84 4.78 3.03 2.16 0.73 8.22 22.21 0.95 3.58 7.57 8.13 1.74 0.80 4.38 1.44 0.10 4.87 16 I3_SR4 SilentIntronRegion 0 14.11 5.42 3.68 10.90 5.35 6.42 24.27 4.90 4.94 0.00 0.00 12.27 37.52 0.27 3.87 20.80 9.90 0.00 0.00 2.13 2.20 4.17 8.32 17 I3_AR5 ActiveIntronRegion 0 12.35 5.42 3.68 10.22 8.03 10.39 25.16 3.74 4.94 0.19 0.00 13.71 32.05 0.00 5.80 20.80 7.70 0.00 0.00 2.13 2.20 4.17 8.81 18 ER4a ExonRegion 0 176.41 86.17 84.58 76.78 120.03 250.12 96.79 86.89 120.24 74.36 178.05 343.77 306.95 130.07 167.29 151.68 134.25 32.29 33.11 71.88 53.07 158.35 55.74 19 E4_Da NovelBoundary 0 9.56 6.71 11.21 19.48 25.55 12.10 6.27 20.45 13.43 7.06 0.00 31.06 7.14 2.47 0.00 0.00 3.46 0.00 0.00 6.33 2.41 5.14 4.35 20 E4a_E5a KnownJunction 0 158.99 129.25 93.31 64.36 89.13 195.74 122.20 90.03 116.69 69.38 184.15 353.97 400.62 157.57 176.28 231.99 92.29 42.24 25.98 84.63 16.62 168.88 67.27 21 I4_SR2 SilentIntronRegion 0 39.87 9.78 2.76 8.21 12.13 5.60 14.00 7.31 9.36 3.64 2.62 15.89 24.96 1.94 10.09 12.01 5.60 1.62 2.16 5.90 3.60 3.08 6.61 22 ER5a ExonRegion 0 182.22 125.16 85.87 81.04 135.91 274.12 112.86 91.95 114.95 71.79 198.23 324.21 332.19 144.56 166.36 178.49 132.10 45.16 37.90 70.40 78.71 147.70 93.57 23 E5a_E6a KnownJunction 0 165.73 157.41 93.40 85.34 284.72 338.33 149.31 105.72 133.82 82.63 208.21 379.32 482.44 220.61 157.49 206.27 128.75 51.11 47.91 75.93 92.54 180.82 101.58 24 ER6a ExonRegion 0 143.92 92.88 80.16 70.13 118.59 242.97 87.14 113.16 134.87 83.23 188.78 296.01 376.74 185.76 196.97 205.95 131.12 68.02 53.42 64.48 106.63 143.52 99.74 25 E6a_E7a KnownJunction 0 154.99 106.89 103.10 73.18 103.90 258.66 100.47 126.51 168.40 85.96 275.33 241.88 348.03 126.38 138.95 146.80 159.70 30.68 17.98 55.03 109.41 93.56 67.35 26 ER7a ExonRegion 0 190.05 106.29 76.04 69.77 137.94 228.92 111.08 112.24 135.29 73.61 184.67 186.78 356.62 177.09 172.22 156.04 120.78 35.75 33.04 36.88 93.43 121.14 82.49 27 E7a_E8a KnownJunction 1 220.41 108.60 91.19 83.04 135.48 162.52 118.84 137.27 167.56 86.84 163.46 112.84 364.42 195.95 105.07 100.49 122.02 28.56 16.38 41.80 56.09 74.28 35.51 28 ER8a ExonRegion 0 326.86 153.55 76.40 62.51 166.32 328.08 127.64 112.51 111.77 65.82 161.16 212.10 391.40 151.16 178.20 143.23 130.23 25.23 52.14 38.28 73.93 104.77 51.56 29 E8_Da NovelBoundary 0 9.93 3.03 11.86 2.96 19.35 6.98 30.91 11.54 14.81 2.77 7.11 27.91 32.63 11.95 14.09 12.39 12.16 0.00 0.00 2.43 0.00 16.59 18.18 30 E8a_E9a KnownJunction 0 288.57 157.87 69.84 63.99 163.58 262.01 126.70 97.67 76.01 59.79 118.03 165.95 252.42 93.71 114.72 90.32 95.56 12.23 21.08 21.86 49.98 49.35 19.72 31 I8_AR3 ActiveIntronRegion 0 28.39 6.48 5.20 19.25 13.54 7.13 8.77 7.61 10.41 9.37 4.61 8.12 9.15 3.16 7.81 6.69 6.16 2.89 0.00 6.16 2.16 3.77 11.19 32 I8_AR4 ActiveIntronRegion 0 10.02 5.69 7.35 11.72 20.93 19.19 11.92 12.14 2.72 8.82 5.97 5.48 11.57 0.14 6.38 8.59 7.70 1.85 0.00 5.48 4.55 1.06 6.26 33 E9_Aa NovelBoundary 0 31.41 6.45 10.35 28.37 19.27 8.35 12.37 7.72 8.42 8.38 2.58 0.00 13.64 4.65 4.45 6.75 20.38 2.57 4.71 6.52 8.22 2.94 11.44 34 ER9a ExonRegion 0 263.88 125.15 112.68 109.31 152.20 233.58 113.71 120.39 114.42 75.06 154.62 226.95 332.96 137.02 198.46 131.48 112.36 28.82 31.30 55.61 65.41 110.24 58.48 35 E9a_E10a KnownJunction 0 237.60 97.48 141.33 91.76 195.08 282.73 118.40 111.89 119.04 84.45 190.42 243.08 230.34 106.95 195.32 117.66 113.98 39.67 21.84 52.35 66.66 104.89 43.28 36 E10_Aa NovelBoundary 0 3.78 11.18 7.48 23.47 14.43 0.00 12.81 5.42 5.79 1.29 0.00 24.01 19.32 2.35 4.45 4.02 4.11 0.00 0.00 0.00 0.00 3.12 0.00 37 ER10a ExonRegion 0 205.27 111.54 114.40 106.13 165.56 242.60 111.53 122.29 123.68 84.30 146.20 266.44 340.16 133.49 252.69 189.02 80.14 65.16 31.99 50.12 66.72 104.12 60.98 38 E10_Da NovelBoundary 0 10.89 30.32 7.04 32.23 21.65 5.56 18.99 7.48 23.64 9.32 4.37 24.31 26.95 5.42 8.90 8.63 4.30 0.00 0.00 8.56 2.84 0.00 4.35 39 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E10a_E12a KnownJunction 1 269.75 91.37 100.53 91.73 194.65 225.72 112.04 109.34 116.17 71.10 133.09 229.27 406.63 144.15 272.70 141.76 41.70 72.88 38.59 60.40 48.74 99.75 72.56 41 I10 Intron 0 19.19 6.01 8.87 17.09 16.35 17.81 11.63 8.34 10.13 3.94 2.11 8.36 16.20 5.01 10.12 6.98 4.68 2.09 0.90 4.39 4.10 7.08 6.66 42 I10_SR2 SilentIntronRegion 0 33.14 5.31 13.86 17.34 23.17 21.75 12.09 10.08 7.64 4.87 2.06 4.14 9.00 4.60 10.89 10.58 9.00 3.82 0.38 5.30 8.62 6.42 12.54 43 I10_AR4 ActiveIntronRegion 0 18.80 8.61 10.09 32.98 21.55 24.56 15.01 12.70 23.64 7.28 2.41 7.18 28.83 6.81 14.60 7.26 4.33 2.57 1.18 4.93 1.81 11.92 4.53 44 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER11a ExonRegion 0 0.24 0.00 0.23 0.61 0.30 1.29 0.10 0.13 0.05 0.17 0.64 0.00 1.22 0.72 0.21 0.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 I11 Intron 0 20.72 14.35 7.69 26.59 17.06 24.74 23.89 16.71 21.06 10.41 5.28 16.75 25.75 7.52 12.94 20.30 12.21 8.16 2.36 6.42 11.28 13.99 14.04 47 I11_SR1 SilentIntronRegion 0 20.77 14.38 7.71 26.65 17.10 24.79 23.94 16.75 21.10 10.43 5.29 16.79 25.81 7.54 12.97 20.35 12.24 8.18 2.36 6.43 11.30 14.03 14.07 48 E12_Aa NovelBoundary 0 26.52 35.78 3.61 14.92 33.53 67.12 28.97 12.65 11.89 5.75 0.00 0.00 47.72 9.36 19.66 19.99 4.68 7.42 4.61 2.68 2.41 15.74 4.35 49 ER12a ExonRegion 0 264.82 109.24 99.21 97.61 143.35 269.88 97.05 97.45 112.06 75.19 140.39 260.77 323.96 141.00 232.31 191.56 98.95 74.65 25.44 47.35 72.45 105.78 65.36 50 E12a_E13a KnownJunction 0 253.60 128.86 92.46 72.42 133.96 294.38 95.35 90.12 113.31 80.96 155.20 169.26 211.03 137.62 207.43 196.87 129.78 68.15 31.81 52.22 78.33 86.83 52.41 51 E13_Aa NovelBoundary 0 13.78 5.59 21.11 20.51 8.32 2.10 8.97 6.70 13.89 2.71 0.00 0.00 19.97 4.94 10.14 7.26 4.77 8.79 0.00 0.00 5.62 9.37 3.59 52 ER13a ExonRegion 0 134.44 82.63 86.83 73.94 83.55 187.96 81.73 91.98 83.81 71.27 106.86 195.53 188.85 118.76 237.28 151.00 68.07 46.72 41.67 49.89 73.06 78.88 48.24 53 E13_Da NovelBoundary 0 28.97 3.09 0.00 11.32 14.94 17.38 8.44 9.20 8.16 9.27 14.85 50.87 64.93 24.37 17.80 45.03 17.30 12.23 4.24 12.34 20.57 16.66 10.41 54 E13a_E14a KnownJunction 1 79.20 25.26 50.89 38.92 53.57 82.23 41.12 56.31 53.59 54.56 16.27 66.47 55.35 45.03 107.55 39.90 26.83 11.28 31.53 23.84 7.91 5.69 0.00 55 E13a_E15a KnownJunction 1 98.39 31.84 47.40 17.65 16.55 20.27 34.89 14.29 17.94 15.69 58.91 45.16 61.03 25.13 132.64 21.45 26.37 25.58 16.94 8.31 48.50 63.87 56.85 56 I13 Intron 0 38.22 12.42 7.11 21.98 33.97 41.96 30.03 20.69 28.64 12.67 18.31 46.38 62.46 23.54 21.92 32.78 19.16 3.48 2.27 8.84 5.82 13.04 8.64 57 I13_SR1 SilentIntronRegion 0 32.85 9.53 5.62 12.56 21.76 24.71 24.34 13.81 15.62 3.25 10.96 36.44 46.14 25.61 21.46 29.25 11.36 4.07 2.43 5.15 10.93 7.75 11.96 58 I13_AR1 ActiveIntronRegion 0 19.06 5.05 9.47 14.93 18.10 40.33 22.53 12.57 18.50 6.45 14.21 32.19 41.93 30.76 24.81 31.69 12.49 5.65 4.28 4.49 8.02 6.83 6.99 59 I13_AR2 ActiveIntronRegion 0 17.47 9.81 4.35 19.96 37.77 45.11 36.62 19.90 27.17 9.81 13.55 51.52 75.07 15.88 13.80 26.33 9.63 1.60 0.48 4.67 2.64 12.02 7.35 60 I13_SR3 SilentIntronRegion 0 25.83 15.09 5.40 28.79 21.56 41.84 26.80 26.49 30.57 20.46 19.71 61.39 95.16 23.50 15.32 28.49 24.22 1.40 0.83 8.54 2.70 11.57 12.09 61 I13_AR3 ActiveIntronRegion 0 50.49 7.84 4.90 27.06 43.96 61.56 31.59 17.53 33.70 16.88 28.44 60.61 123.28 18.10 17.82 40.34 31.59 3.70 0.00 10.03 2.20 15.18 8.81 62 I13_AR4 ActiveIntronRegion 1 29.40 8.36 6.40 24.99 24.97 29.95 26.92 12.29 28.54 15.42 12.03 48.11 116.21 17.32 5.80 32.69 23.84 1.85 0.00 8.51 1.22 16.67 5.22 63 I13_AR5 ActiveIntronRegion 0 19.75 15.32 7.19 24.35 21.05 24.21 24.63 16.59 27.25 18.12 13.92 55.42 113.50 18.08 13.35 32.30 23.11 0.74 0.00 8.51 2.20 15.70 6.85 64 I13_AR6 ActiveIntronRegion 0 17.21 26.44 7.22 24.21 26.83 42.08 35.82 22.24 37.93 17.08 21.92 74.06 64.43 33.51 22.68 32.93 20.85 0.00 0.00 10.47 1.39 11.08 15.84 65 I13_AR7 ActiveIntronRegion 0 12.65 8.17 6.71 20.96 29.10 38.67 30.99 11.55 32.46 12.29 19.91 48.65 66.34 21.66 19.12 33.58 20.97 3.07 0.00 12.83 6.12 13.08 9.01 66 I13_AR8 ActiveIntronRegion 0 60.64 16.58 8.14 27.32 44.18 46.69 31.79 27.75 35.08 16.39 22.96 50.03 61.97 24.95 26.33 38.10 24.29 4.12 3.41 11.72 4.17 17.93 8.01 67 I13_AR9 ActiveIntronRegion 0 123.93 22.60 11.98 26.05 49.65 61.94 48.69 30.54 26.07 18.10 19.76 81.30 66.70 25.26 11.93 57.79 30.44 7.39 9.56 8.51 10.77 30.10 11.75 68 I13_SR5 SilentIntronRegion 0 54.42 11.40 6.67 10.84 34.09 38.13 26.52 15.63 14.37 7.64 10.62 20.66 37.98 18.49 23.38 22.25 16.25 3.21 2.38 3.75 16.16 3.77 7.98 69 ER14a ExonRegion 1 83.74 32.67 53.30 37.25 32.20 106.12 27.45 57.56 50.56 49.62 28.80 99.14 111.31 53.22 127.66 55.78 29.93 11.83 14.33 23.33 4.70 8.61 1.76 70 I14 Intron 0 115.11 24.14 13.29 30.13 56.94 59.52 32.04 22.93 20.57 16.01 16.67 21.95 19.98 19.21 32.98 36.10 16.07 7.80 2.36 7.50 10.82 12.37 9.80 71 I14_SR1 SilentIntronRegion 0 23.53 3.64 0.68 7.19 22.15 25.33 15.89 9.73 7.07 3.95 9.62 6.04 8.62 8.35 16.80 6.22 13.36 1.85 0.00 1.68 3.79 4.22 9.01 72 I14_AR1 ActiveIntronRegion 0 113.64 22.67 12.86 31.37 56.16 61.18 36.26 23.73 18.65 15.23 16.37 24.23 21.09 18.53 31.96 33.64 17.09 4.55 2.00 6.15 7.91 12.15 10.10 73 I14_SR2 SilentIntronRegion 0 138.36 31.03 16.56 33.40 66.06 63.46 27.93 24.43 27.20 20.06 19.00 20.74 19.91 22.88 37.62 45.87 14.81 14.20 3.59 10.99 17.31 14.14 9.60 74 I14_AR2 ActiveIntronRegion 0 36.64 9.59 5.34 7.72 28.86 37.29 20.17 12.18 7.88 6.17 9.20 14.43 15.86 10.25 26.94 22.29 14.54 9.41 0.00 4.51 7.56 9.48 8.25 75 E15_Aa NovelBoundary 0 185.96 48.35 28.44 34.29 76.23 69.68 27.16 24.77 24.13 20.09 16.32 12.60 33.44 44.09 70.21 31.79 18.23 12.31 9.04 14.32 32.49 0.00 12.29 76 ER15a ExonRegion 0 242.61 96.93 82.08 88.84 146.37 167.71 67.17 110.41 91.92 64.59 94.42 111.05 119.53 91.36 195.77 106.82 56.26 35.11 22.99 40.35 42.52 81.25 37.74 77 IG13 Intergenic 0 10.94 5.42 3.34 5.05 8.20 8.60 5.83 4.53 6.99 2.65 1.06 6.25 3.57 3.16 3.03 3.41 3.36 1.41 1.17 3.71 2.16 2.26 5.37 78 IG13_AR1 ActiveIntergenicRegion 0 17.48 10.63 3.92 8.26 15.09 15.50 10.83 7.57 13.33 5.27 2.55 14.19 7.09 5.14 5.86 5.19 4.61 1.99 1.62 7.03 2.06 3.94 5.74 79 IG13_SR1 SilentIntergenicRegion 0 21.51 14.11 2.63 6.24 16.19 10.54 8.43 5.84 8.43 2.30 0.79 1.85 1.59 1.61 5.50 8.62 4.22 2.03 0.66 4.31 2.24 1.29 5.44 80 IG13_AR2 ActiveIntergenicRegion 0 16.85 8.80 6.19 8.29 18.43 11.27 9.46 3.62 10.97 1.40 2.12 5.04 2.59 2.60 3.30 5.42 0.87 6.11 1.34 5.43 4.48 2.10 4.93 81 IG13_SR2 SilentIntergenicRegion 0 29.09 13.09 6.35 7.81 14.35 13.74 7.53 5.37 12.89 2.52 3.41 7.08 0.00 3.13 11.66 2.92 2.70 8.80 2.20 1.90 0.00 0.49 1.60 82 IG13_AR3 ActiveIntergenicRegion 0 24.44 10.51 5.71 10.21 13.81 14.65 4.87 11.90 13.48 4.66 1.08 1.56 1.70 4.96 4.15 6.31 7.18 3.98 6.54 10.24 7.37 2.06 7.12 83 IG13_SR3 SilentIntergenicRegion 0 16.14 18.30 3.68 3.41 8.70 12.84 5.46 6.91 8.65 8.03 0.00 2.16 0.00 9.54 8.70 13.37 3.30 11.09 0.00 5.85 7.44 0.00 5.87 84 IG13_AR4 ActiveIntergenicRegion 0 12.70 16.68 3.84 6.09 7.49 14.06 7.06 6.91 9.39 7.88 0.00 4.33 0.00 11.15 4.45 12.68 0.00 6.78 0.00 2.70 6.61 1.11 3.13 85 IG13_AR5 ActiveIntergenicRegion 0 14.71 15.05 6.16 10.53 5.35 16.78 11.02 8.94 8.31 7.40 0.63 2.38 0.00 7.27 0.87 13.89 6.44 3.83 2.31 5.74 9.59 5.10 0.15 86 IG13_SR4 SilentIntergenicRegion 0 17.88 11.13 9.42 8.00 18.10 12.88 12.89 10.73 5.49 3.83 1.93 0.00 0.00 1.71 0.15 6.34 9.56 1.85 3.35 4.48 7.83 4.39 2.94 87 IG13_AR6 ActiveIntergenicRegion 0 25.94 8.12 3.42 8.02 18.14 15.05 8.30 13.90 13.95 4.16 0.67 5.38 6.53 3.68 5.58 5.76 5.51 3.19 2.66 5.20 2.54 4.52 7.21