Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC006019.2 Gene 0 4.13 5.05 2.87 7.27 9.04 3.04 20.58 49.79 61.18 33.89 0.77 1.45 1.56 2.11 1.33 1.45 2.06 18.78 40.25 10.86 3.86 2.95 4.39 2 425591 Transcript 0 2.21 3.66 0.94 1.96 5.09 2.64 12.82 22.75 37.57 14.14 0.59 2.19 1.18 1.89 1.60 1.09 0.89 8.57 17.01 5.81 2.03 1.66 3.06 3 366161 Transcript 0 0.37 0.36 0.00 0.00 2.35 0.97 2.96 0.49 0.01 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.38 0.00 0.00 0.00 4 454405 Transcript 0 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 446335 Transcript 0 0.00 0.00 0.00 1.93 0.00 0.28 0.08 0.49 1.61 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 2.08 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 4.41 7.31 1.88 3.92 10.19 5.29 25.64 42.95 73.35 28.28 1.18 4.37 2.37 3.78 3.20 2.19 1.78 17.13 34.02 11.62 4.05 3.32 6.12 7 E1_Ab KnownBoundary 0 3.26 9.08 13.63 45.68 47.37 17.94 133.02 411.73 452.19 250.73 0.00 0.00 0.00 0.00 0.00 0.00 7.85 183.85 280.48 103.80 2.59 0.00 11.61 8 ER1b ExonRegion 0 7.49 7.89 5.32 12.07 14.10 4.30 31.11 84.69 97.41 60.40 1.36 1.87 2.79 3.33 2.04 2.49 3.76 33.21 70.96 18.04 7.40 5.46 7.90 9 E1_Ac KnownBoundary 0 0.00 0.00 1.69 3.90 15.70 0.00 30.34 39.43 58.04 16.20 0.00 0.00 0.00 0.00 0.00 0.00 4.30 6.63 25.04 5.75 0.00 0.00 0.00 10 ER1c ExonRegion 0 2.06 4.95 1.41 6.53 6.36 1.78 23.76 69.01 73.27 24.30 0.00 0.94 0.00 2.19 0.12 0.78 2.42 12.21 32.21 7.49 0.00 1.10 0.76 11 E1_Da NovelBoundary 0 0.00 6.25 2.72 10.45 8.66 2.73 23.01 24.64 33.45 10.42 0.00 7.05 0.00 2.47 0.00 0.00 0.00 12.77 22.68 8.31 0.00 0.00 11.95 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2_Aa NovelBoundary 0 0.00 8.55 2.78 2.66 4.33 0.00 31.75 36.31 67.19 24.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.01 14.31 3.07 0.00 0.00 7.77 16 ER2a ExonRegion 0 1.50 1.44 0.00 0.00 9.40 3.90 11.18 1.94 0.05 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 1.51 0.00 0.00 0.00 17 E2_Da NovelBoundary 0 0.00 3.09 6.27 2.00 8.32 0.00 27.03 55.70 53.24 28.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 39.53 6.52 0.00 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 Ix Intron 0 0.20 3.46 1.21 4.52 11.01 2.00 23.49 33.63 34.74 18.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.78 19.74 6.14 0.00 0.10 0.42 20 Ix_SR1 SilentIntronRegion 0 0.20 3.47 1.21 4.52 11.02 2.00 23.51 33.66 34.77 18.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.79 19.76 6.15 0.00 0.10 0.42 21 E3_Aa NovelBoundary 0 0.00 3.35 0.00 3.76 10.87 0.00 51.76 35.57 29.31 17.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.19 12.33 5.88 0.00 0.00 0.00 22 ER3a ExonRegion 0 0.32 2.43 1.34 3.04 8.02 1.37 16.25 17.92 30.67 13.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.57 13.79 7.61 0.00 0.00 0.00 23 E3_Da NovelBoundary 0 0.00 3.03 0.00 3.83 12.65 4.54 16.38 26.41 20.46 8.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.31 20.14 2.56 0.00 0.00 0.00 24 ER3b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 Ix_AR1 ActiveIntronRegion 0 0.00 6.10 0.00 0.00 5.35 0.00 19.86 13.83 38.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.51 0.00 10.42 0.00 26 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER6a ExonRegion 0 0.00 0.00 0.00 2.43 0.00 1.19 0.00 2.02 2.48 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 1.12 0.00 0.00 0.00 0.00 32 E6_Da KnownBoundary 0 0.00 0.00 0.00 7.82 0.00 2.90 0.00 4.35 6.94 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.42 0.00 0.00 0.00 0.00 33 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6b ExonRegion 0 0.00 0.00 0.00 5.80 0.00 0.83 0.23 1.47 4.83 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.22 6.23 0.00 0.00 0.00 0.00 35 ER7a ExonRegion 0 0.00 0.00 0.00 0.98 0.00 0.00 0.00 0.00 0.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00