Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDK5 Gene 0 24.87 58.01 108.79 30.13 38.17 117.62 39.70 48.36 68.86 65.01 45.68 13.75 12.21 40.46 53.96 36.77 39.81 54.07 89.11 53.28 36.89 23.65 23.34 2 485972 Transcript 0 0.63 1.12 0.45 0.55 0.85 3.40 0.93 0.13 0.16 0.34 0.62 0.58 0.11 0.60 1.00 0.97 0.18 0.51 0.80 0.34 0.17 0.42 0.19 3 297518 Transcript 0 59.30 122.54 242.08 46.72 31.69 105.80 43.30 96.11 143.57 120.06 63.07 17.32 12.60 59.21 66.89 89.22 91.29 124.94 173.36 116.52 59.43 41.57 57.41 4 469108 Transcript 0 0.98 2.70 3.75 0.74 3.64 6.69 2.96 2.15 2.29 2.32 1.43 0.54 0.12 1.39 1.05 1.15 2.38 1.22 4.16 1.95 0.58 0.53 0.50 5 453907 Transcript 0 3.78 40.26 57.33 16.41 56.28 137.82 84.88 22.84 22.31 15.12 7.48 18.16 0.00 9.65 18.67 24.69 21.13 28.06 56.47 32.15 8.09 0.00 11.87 6 487703 Transcript 0 0.14 1.68 0.35 0.00 1.88 0.23 0.34 0.00 0.23 0.22 0.37 0.23 0.00 0.00 0.00 0.19 0.00 0.00 1.03 0.00 0.28 0.00 0.75 7 476691 Transcript 0 5.23 1.00 0.77 1.10 2.50 6.75 1.39 1.34 4.45 2.10 1.13 0.26 0.08 1.47 5.02 0.52 3.57 2.13 2.40 3.25 1.12 0.62 0.14 8 ER1a ExonRegion 0 0.63 1.12 0.45 0.55 0.85 3.40 0.93 0.13 0.16 0.34 0.62 0.58 0.11 0.60 1.00 0.97 0.18 0.51 0.80 0.34 0.17 0.42 0.19 9 E1_Ab KnownBoundary 0 18.74 23.48 1.80 0.00 3.40 65.59 6.76 2.38 0.00 1.34 7.84 0.00 0.00 9.89 9.64 16.41 0.00 7.17 19.20 5.75 0.00 12.49 0.00 10 E1_Ac KnownBoundary 0 55.49 71.11 10.94 8.72 108.66 250.76 144.63 12.28 11.40 10.02 41.64 0.00 0.00 36.32 27.44 29.39 22.63 24.00 32.38 28.25 18.04 14.45 25.69 11 ER1b ExonRegion 0 35.98 65.35 15.77 8.63 58.51 199.52 86.15 7.84 9.72 15.37 32.47 0.00 7.82 29.56 18.37 33.49 17.60 26.73 36.31 22.84 13.81 21.11 15.07 12 ER1c ExonRegion 0 134.72 237.66 115.82 27.97 192.36 769.08 319.59 48.10 80.82 87.99 118.58 4.52 4.49 89.57 149.04 111.39 91.06 129.42 201.72 154.21 85.99 49.91 85.35 13 E1_Ad KnownBoundary 0 233.97 403.15 232.01 41.25 281.32 1219.18 490.65 93.24 164.35 167.75 159.41 0.00 6.17 84.41 178.13 166.45 144.55 220.28 311.73 277.34 141.10 66.87 159.29 14 ER1d ExonRegion 0 82.54 167.77 158.96 39.15 112.68 500.32 173.11 75.38 126.43 128.29 80.11 10.10 6.25 30.05 59.56 71.99 70.97 149.82 158.38 135.70 66.17 34.20 73.74 15 E1a_E3a KnownJunction 0 18.60 58.28 118.39 34.00 45.59 161.10 49.90 63.58 113.16 95.55 23.95 18.01 12.50 10.18 18.91 31.70 25.25 75.20 71.15 42.38 20.02 20.45 20.74 16 ER2a ExonRegion 0 0.27 0.00 0.70 0.00 0.62 0.47 0.67 0.00 0.47 0.43 0.74 0.45 0.00 0.00 0.00 0.39 0.00 0.00 2.06 0.01 0.56 0.00 1.49 17 E2a_E3a KnownJunction 0 0.00 3.35 0.00 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 16.86 31.26 145.71 43.15 17.56 57.59 16.35 73.90 113.74 120.42 110.02 26.22 2.74 40.24 60.63 30.89 90.72 58.03 99.03 87.88 83.42 25.77 20.09 19 E3a_E4a KnownJunction 0 29.63 31.31 298.69 69.46 23.51 46.28 4.33 129.10 206.62 228.73 248.85 11.85 26.13 99.95 126.09 87.16 209.82 127.05 269.84 238.28 156.48 62.58 40.29 20 ER4a ExonRegion 0 26.36 85.95 291.01 73.42 24.16 65.91 18.34 120.79 197.18 197.44 140.05 33.81 28.83 133.27 191.35 146.16 108.40 174.94 298.02 210.61 88.50 71.51 91.68 21 E4_Da KnownBoundary 0 0.00 3.22 4.88 2.03 0.00 0.00 0.00 4.97 3.59 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 3.39 0.00 0.00 0.00 0.00 22 E4a_E4b KnownJunction 0 39.78 174.05 291.00 88.13 63.58 138.22 53.79 148.03 204.74 204.15 106.40 55.22 12.99 86.59 174.42 161.67 82.19 197.15 293.84 187.47 72.09 60.38 102.78 23 ER4b ExonRegion 0 2.29 3.34 6.48 1.07 2.80 4.32 5.00 3.86 3.18 2.35 2.73 0.62 0.08 2.51 1.84 1.41 0.97 2.03 3.98 1.63 0.77 1.25 0.81 24 E4_Ab KnownBoundary 0 0.00 8.22 3.02 0.00 3.90 5.45 2.21 2.26 3.50 3.12 0.00 0.00 0.00 0.00 5.19 0.00 0.00 2.24 0.00 2.75 0.00 2.94 0.00 25 ER4c ExonRegion 0 39.79 180.55 258.53 76.55 230.11 450.20 117.68 138.94 187.43 184.31 112.01 55.71 18.29 103.97 119.63 81.83 117.07 150.28 184.27 165.82 87.96 41.05 73.47 26 E4_Db KnownBoundary 0 3.11 3.09 1.71 2.03 3.48 5.79 2.08 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4b_E4c KnownJunction 0 48.82 247.98 251.79 72.92 416.72 818.56 248.95 127.78 173.03 171.84 145.25 69.32 40.58 97.30 132.27 59.81 95.18 108.07 172.43 169.12 73.14 30.49 42.08 28 ER4d ExonRegion 0 0.66 4.76 4.77 1.16 7.73 15.75 3.59 2.59 3.71 4.05 1.57 1.00 0.28 1.67 1.31 2.05 2.87 1.63 6.21 3.91 0.97 0.35 0.68 29 E4_Ac KnownBoundary 0 0.00 12.89 1.09 0.00 0.00 36.00 6.27 0.00 1.65 3.98 2.11 0.00 0.00 0.00 0.00 0.00 0.00 2.07 7.34 6.52 0.00 0.00 0.00 30 ER4e ExonRegion 0 71.73 336.96 306.47 87.64 306.37 966.15 349.38 162.14 193.98 197.96 170.79 56.44 67.17 126.45 150.35 84.65 133.16 160.36 243.40 172.76 110.34 82.78 46.93 31 E4c_E5b KnownJunction 0 152.77 464.72 351.14 93.63 169.61 811.01 367.21 181.75 208.30 206.35 164.36 95.28 98.69 121.02 154.03 83.40 132.21 155.62 319.44 187.41 107.86 108.63 47.63 32 E4c_E6a KnownJunction 0 3.78 40.26 57.33 16.41 56.28 137.82 84.88 22.84 22.31 15.12 7.48 18.16 0.00 9.65 18.67 24.69 21.13 28.06 56.47 32.15 8.09 0.00 11.87 33 ER4f ExonRegion 0 0.00 0.00 0.00 0.00 0.38 0.00 0.28 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 3.30 0.00 2.28 0.30 0.00 0.00 0.00 34 ER5a ExonRegion 0 2.53 1.24 1.23 1.02 2.63 12.52 2.77 2.52 6.71 2.79 1.09 0.51 0.16 1.10 1.20 1.05 1.61 1.85 3.76 1.36 0.49 1.24 0.07 35 E5_Ab KnownBoundary 0 0.00 2.96 1.74 1.43 3.31 19.19 3.67 2.55 4.48 3.17 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 36 ER5b ExonRegion 0 114.16 323.13 409.36 118.33 112.04 388.71 144.73 191.09 240.43 232.36 150.22 74.28 43.59 150.70 178.23 98.99 138.12 164.08 289.90 178.21 124.78 98.28 58.95 37 E5a_E6a KnownJunction 0 150.03 239.23 497.59 137.91 219.61 397.50 130.28 213.79 276.96 273.51 160.67 95.58 40.42 172.17 179.99 87.84 127.16 178.95 284.90 220.39 128.31 77.15 79.99 38 ER6a ExonRegion 0 118.02 185.52 467.01 141.30 150.34 353.12 111.94 199.62 272.81 249.77 147.57 77.58 65.66 159.86 202.39 150.59 125.21 262.70 365.47 211.91 126.58 132.12 98.63 39 E6_Da KnownBoundary 0 21.86 2.96 0.00 2.06 8.32 2.90 0.00 0.00 5.30 4.41 4.32 0.00 0.00 4.59 11.00 0.00 8.88 6.22 3.76 11.70 2.97 0.00 0.00 40 E6a_E7a KnownJunction 0 127.21 190.43 467.37 143.21 129.71 413.11 106.70 205.12 305.52 230.15 127.03 82.53 144.96 160.69 248.72 238.91 125.29 261.20 363.78 225.88 129.92 128.10 122.92 41 ER6b ExonRegion 0 7.92 0.76 0.31 1.17 2.36 0.98 0.00 0.16 2.18 1.41 1.17 0.00 0.00 1.85 8.84 0.00 5.53 2.41 1.04 5.15 1.74 0.00 0.20 42 E7_Aa NovelBoundary 0 13.19 6.05 4.55 3.86 6.71 15.28 8.26 2.55 11.34 1.53 4.58 0.00 0.00 2.47 0.00 12.99 17.30 6.67 9.41 9.20 3.03 0.00 0.00 43 ER7a ExonRegion 0 58.47 176.41 328.60 124.66 85.77 336.95 90.47 160.03 248.65 205.83 136.49 51.15 80.67 157.13 206.41 129.35 133.62 174.45 272.03 182.52 102.78 83.54 67.35 44 E7_Da NovelBoundary 0 56.68 175.69 286.83 100.75 54.67 240.43 112.26 114.31 182.43 176.91 130.14 23.56 31.65 92.12 150.94 69.90 119.87 122.49 195.77 138.70 121.82 37.23 52.07 45 E7b_E8a KnownJunction 0 37.27 228.25 373.40 112.77 111.97 323.05 109.44 174.11 234.49 205.68 169.89 18.61 0.00 88.53 133.14 97.58 137.35 166.81 303.91 171.04 159.08 76.85 62.14 46 ER7b ExonRegion 0 42.43 186.53 318.76 104.94 85.02 286.91 98.09 149.12 218.28 198.52 176.86 16.53 15.99 96.41 156.14 90.78 140.59 167.22 269.31 153.87 154.16 59.57 67.41 47 ER8a ExonRegion 0 50.80 180.87 381.76 88.76 73.74 234.33 88.27 166.97 241.27 199.23 132.46 36.68 27.74 136.45 163.92 127.59 119.26 225.66 299.88 154.92 135.15 78.19 70.86 48 E8a_E9a KnownJunction 0 37.12 94.59 193.75 22.57 21.90 72.23 23.72 72.08 101.88 87.01 37.22 0.00 13.47 26.66 30.78 74.42 67.04 86.35 120.57 101.12 37.31 31.05 56.08 49 E8a_E9b NovelJunction 0 0.00 3.42 11.74 0.00 0.00 2.73 0.00 0.00 3.39 2.98 0.00 0.00 0.00 5.06 0.00 0.00 0.00 2.24 14.12 9.27 0.00 0.00 0.00 50 E8b_E9b KnownJunction 0 26.38 70.18 191.42 57.73 10.19 43.16 32.77 89.87 131.48 98.64 40.54 0.00 0.00 11.89 22.99 54.69 43.20 140.44 115.96 31.19 38.05 36.43 18.35 51 ER8b ExonRegion 0 74.08 130.15 307.57 80.41 42.81 163.21 52.96 126.18 175.39 165.15 98.58 21.65 23.45 68.21 98.64 115.91 102.33 171.84 235.72 123.40 74.93 50.00 76.35 52 ER9a ExonRegion 0 81.49 150.48 290.41 70.87 41.47 139.37 62.89 120.13 185.27 153.11 88.91 34.64 11.73 91.76 102.99 104.02 115.53 163.53 226.16 131.91 81.54 52.09 58.73 53 ER9b ExonRegion 0 114.47 261.88 435.30 117.37 117.28 284.21 97.01 175.63 266.47 254.87 191.88 31.19 69.87 152.97 210.41 161.96 183.84 212.74 374.04 174.90 137.83 69.60 98.90 54 E9a_E10a KnownJunction 0 85.05 239.10 419.94 95.59 100.17 276.94 114.38 161.05 219.41 233.89 207.68 36.76 102.59 119.20 224.49 110.40 184.29 145.50 303.82 158.13 153.27 59.89 78.11 55 ER10a ExonRegion 0 44.00 113.81 353.36 81.64 89.39 291.17 101.26 148.28 205.27 191.39 116.52 22.88 42.04 110.56 156.74 86.93 98.74 136.94 223.01 132.73 137.45 51.99 51.34 56 E10a_E11a KnownJunction 0 50.90 103.67 386.06 71.69 105.18 341.17 70.48 178.34 192.79 156.58 117.77 25.36 12.50 127.55 168.98 98.09 78.73 144.47 211.68 148.67 119.66 43.17 47.04 57 ER11a ExonRegion 0 73.45 51.45 360.29 80.77 50.87 193.73 37.85 133.77 167.22 183.86 113.60 25.98 18.33 106.59 157.50 118.89 92.24 138.01 296.79 106.75 91.82 49.26 69.03 58 E11_Da KnownBoundary 0 15.19 15.33 269.15 58.37 4.33 69.85 30.25 95.17 140.42 134.18 40.38 25.21 0.00 100.24 108.78 66.65 41.61 87.43 195.30 55.42 55.85 43.11 62.66 59 ER11b ExonRegion 0 28.91 39.70 110.49 29.19 34.59 94.90 36.87 42.36 64.45 59.76 42.80 10.40 7.59 43.55 59.50 36.92 36.91 32.25 97.92 47.25 34.22 26.78 25.98 60 IG24 Intergenic 0 0.52 1.01 8.40 2.71 2.65 19.23 4.06 5.48 9.93 7.10 1.63 0.18 0.00 0.98 1.98 1.32 0.49 4.73 7.09 4.95 0.87 0.52 0.58 61 IG24_SR1 SilentIntergenicRegion 0 0.75 0.72 8.89 0.48 1.72 16.04 2.51 5.31 8.91 7.08 1.60 0.00 0.00 1.09 1.91 0.71 0.00 7.67 7.10 4.58 0.52 0.25 0.35 62 IG24_AR1 ActiveIntergenicRegion 0 0.36 1.21 8.08 4.32 3.32 21.57 5.19 5.62 10.69 7.13 1.65 0.30 0.00 0.91 2.03 1.77 0.84 2.63 7.10 5.22 1.13 0.71 0.75