Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM176A Gene 0 127.96 162.11 62.24 14.92 46.05 89.03 16.75 30.36 41.82 42.79 1.47 0.00 1.66 0.12 41.49 0.00 0.19 0.61 3.22 4.40 0.29 29.32 11.11 2 484928 Transcript 0 0.00 1.20 3.53 0.00 0.00 1.64 0.00 0.83 3.71 1.65 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.77 0.58 0.13 0.96 3 4103 Transcript 0 29.63 14.24 3.06 1.36 10.70 4.58 0.66 1.73 1.24 1.72 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00 4 494349 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 475710 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 461345 Transcript 0 51.39 57.04 15.88 1.98 19.20 60.09 14.24 6.89 9.47 14.72 0.32 0.00 0.00 0.00 11.96 0.00 0.00 0.00 5.08 1.06 0.00 5.74 3.92 7 475536 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 468689 Transcript 0 0.00 6.38 0.00 0.00 0.00 0.00 0.00 2.51 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 462826 Transcript 0 20.76 12.35 9.35 4.08 6.19 9.02 1.79 3.16 5.76 4.05 0.00 0.00 0.11 0.00 2.65 0.00 0.00 0.73 1.03 1.31 0.00 0.94 0.74 10 475007 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 481305 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 474166 Transcript 0 19.17 13.91 7.95 0.93 3.36 7.01 1.84 1.79 5.41 3.11 0.00 0.00 0.00 0.00 0.98 0.00 0.00 0.58 0.00 1.80 0.57 1.08 0.76 13 ER1a ExonRegion 0 0.00 1.20 3.53 0.00 0.00 1.64 0.00 0.83 3.71 1.65 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.77 0.58 0.13 0.96 14 E1_Ab KnownBoundary 0 0.00 0.00 1.60 0.00 0.00 2.90 0.00 1.97 1.48 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER1b ExonRegion 0 5.16 7.17 5.59 0.47 2.64 16.26 1.37 3.43 3.18 2.83 0.07 0.00 0.80 0.00 4.71 0.00 0.00 0.00 0.00 0.51 0.58 3.08 4.16 16 E1_Ac KnownBoundary 0 21.78 25.32 1.30 1.60 11.54 101.87 6.54 4.03 0.00 3.30 0.00 0.00 0.00 0.00 13.35 0.00 0.00 0.00 3.95 0.00 0.00 0.00 8.54 17 E1_Ad KnownBoundary 0 199.74 155.43 22.12 3.03 50.51 205.28 26.98 5.42 7.15 5.35 2.58 0.00 0.00 0.00 39.56 0.00 0.00 0.00 0.00 3.00 0.00 13.47 18.87 18 ER1c ExonRegion 0 138.21 135.03 22.06 1.36 38.53 209.79 22.24 9.33 9.26 10.09 1.93 0.00 0.00 0.00 40.33 0.00 0.00 0.00 0.32 2.34 0.00 10.00 28.78 19 E1_Da KnownBoundary 0 104.91 347.96 41.57 8.22 24.02 146.68 38.60 6.70 19.47 36.72 0.00 0.00 0.00 0.00 55.63 0.00 0.00 0.00 4.80 9.40 0.00 11.51 61.89 20 E1a_E2b KnownJunction 0 312.06 195.69 46.83 1.93 126.91 381.88 38.29 25.71 22.60 20.90 0.00 0.00 0.00 0.00 33.75 0.00 0.00 0.00 4.80 0.00 0.00 9.98 15.54 21 ER1d ExonRegion 0 258.85 315.41 50.08 5.81 78.22 350.87 51.10 17.17 21.99 32.42 1.93 0.00 0.00 0.00 74.56 0.00 0.00 0.00 6.26 5.74 0.00 15.00 56.09 22 ER1e ExonRegion 0 26.43 87.66 26.66 3.28 4.36 38.58 10.15 4.40 13.00 25.35 0.87 0.00 0.00 0.00 20.62 0.00 0.00 0.00 0.75 3.04 0.00 6.99 9.65 23 E1b_E2b KnownJunction 0 23.71 132.15 41.31 4.56 7.13 37.71 10.78 18.48 24.10 44.27 2.16 0.00 0.00 0.00 22.25 0.00 0.00 0.00 0.00 6.52 0.00 5.14 8.71 24 ER2a ExonRegion 0 83.96 87.44 24.10 2.73 32.11 107.58 15.45 9.22 13.59 19.50 0.64 0.00 0.00 0.00 19.34 0.00 0.00 0.00 3.19 2.13 0.00 6.95 7.83 25 E2_Da NovelBoundary 0 177.36 236.21 98.61 13.68 101.70 172.00 47.25 47.28 55.84 80.45 7.26 0.00 0.00 0.00 87.52 0.00 0.00 0.00 8.56 2.56 0.00 24.37 29.19 26 E2a_E2f KnownJunction 0 18.82 26.64 7.66 1.23 6.28 12.61 13.03 4.56 5.35 9.94 0.00 0.00 0.00 0.00 4.57 0.00 0.00 0.00 6.96 0.00 0.00 4.53 0.00 27 ER2b ExonRegion 0 188.09 230.74 85.24 8.27 92.67 236.80 44.49 36.01 45.74 65.41 4.90 0.00 0.00 0.00 69.92 0.00 0.00 0.00 8.39 4.89 0.00 16.32 19.68 28 ER2c ExonRegion 0 68.29 151.79 81.08 13.03 37.63 120.69 20.66 33.35 43.82 65.60 2.52 0.00 1.85 0.53 70.19 0.00 0.72 0.00 4.62 7.17 0.00 28.75 16.09 29 E2_Db KnownBoundary 0 6.00 33.81 4.70 1.73 3.57 0.00 4.50 0.00 3.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 30 E2b_E2f KnownJunction 0 173.22 271.14 127.17 13.92 57.39 172.17 23.94 62.56 66.03 95.33 5.37 0.00 22.73 0.00 55.63 0.00 0.00 0.00 9.13 9.52 0.00 52.05 30.05 31 ER2d ExonRegion 0 94.59 171.38 83.41 12.55 32.66 129.82 15.84 19.79 41.10 50.23 3.13 0.00 6.95 0.00 68.03 0.00 2.62 0.00 6.15 9.02 0.00 42.96 16.20 32 ER2e ExonRegion 0 0.56 21.83 6.31 0.24 0.00 4.15 1.56 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.98 0.00 0.00 0.00 1.35 0.09 33 E2_Ad KnownBoundary 0 0.00 27.36 7.27 1.76 0.00 4.88 0.00 2.42 1.16 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 34 ER2f ExonRegion 0 4.21 47.43 8.06 1.34 5.88 15.45 1.48 4.62 5.37 1.43 0.00 0.00 0.00 0.00 1.57 0.00 0.00 2.76 2.12 0.21 0.00 0.96 4.02 35 E2_Dc KnownBoundary 0 3.56 54.46 7.48 2.06 3.57 5.62 3.71 2.55 8.39 2.95 0.00 0.00 0.00 0.00 4.45 0.00 0.00 3.90 4.80 2.68 0.00 0.00 0.00 36 E2c_E2f KnownJunction 0 0.00 6.38 0.00 0.00 0.00 0.00 0.00 2.51 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER2g ExonRegion 0 6.97 50.27 7.88 1.93 2.35 19.91 2.18 1.04 6.94 1.69 0.00 0.00 0.00 0.00 2.75 0.00 0.00 1.94 1.35 0.46 0.00 0.00 1.60 38 E2_Ae KnownBoundary 0 3.63 14.87 0.00 0.00 3.23 8.52 4.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER2h ExonRegion 0 10.33 9.25 2.35 0.27 6.46 6.99 1.38 0.40 2.68 1.75 0.04 0.00 0.06 0.00 1.82 0.00 0.00 0.34 0.06 0.40 0.00 0.72 0.18 40 E2_Af KnownBoundary 0 29.63 30.13 13.54 2.96 32.60 37.59 6.76 1.85 9.06 7.33 0.00 0.00 0.00 0.00 5.81 0.00 0.00 2.45 0.00 3.26 0.00 2.94 4.35 41 ER2i ExonRegion 0 119.30 425.49 129.57 26.41 89.06 241.00 47.54 64.02 110.49 117.29 6.40 0.00 3.61 0.92 120.05 0.00 0.00 1.17 9.90 15.90 1.19 69.09 36.63 42 E2_Dd KnownBoundary 0 185.81 508.99 140.71 38.72 173.26 317.71 45.40 79.72 122.97 143.20 2.21 0.00 0.00 0.00 138.70 0.00 0.00 0.00 12.42 8.25 2.59 126.88 31.76 43 ER2j ExonRegion 0 94.36 243.01 119.71 30.10 95.21 225.91 38.14 61.70 85.60 117.11 2.15 0.00 3.91 0.00 97.03 0.00 2.75 0.00 9.56 6.74 0.67 73.27 16.56 44 E2_De KnownBoundary 0 3.48 24.27 4.55 0.00 3.99 9.60 2.25 3.90 0.00 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E2e_E2i KnownJunction 0 32.97 117.54 139.47 38.36 95.25 250.76 35.15 74.47 91.23 121.66 4.79 0.00 6.82 0.00 50.81 0.00 4.77 0.00 0.00 6.01 0.00 22.35 3.76 46 ER2k ExonRegion 0 23.99 22.14 10.01 5.35 9.45 15.00 3.16 5.53 8.04 5.31 0.00 0.00 0.22 0.00 4.25 0.00 0.00 0.89 2.06 1.95 0.00 1.88 1.47 47 E2_Ag KnownBoundary 0 61.86 22.50 10.23 3.80 7.72 11.41 4.24 7.68 6.86 8.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.40 0.00 0.00 2.82 8.19 48 ER2l ExonRegion 0 25.45 19.07 9.14 2.23 6.80 14.09 2.68 7.02 5.20 3.91 0.00 0.00 0.00 0.00 1.43 0.00 0.00 0.00 3.15 0.00 0.00 0.34 5.46 49 E2_Ah KnownBoundary 0 31.12 8.42 8.87 4.00 11.80 13.80 1.99 3.53 4.69 2.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.16 50 ER2m ExonRegion 0 34.97 9.00 12.59 4.17 11.46 8.69 2.36 5.13 4.30 7.85 0.04 0.00 0.05 0.00 7.62 0.00 0.03 0.98 2.79 0.04 0.00 5.08 3.24 51 E2_Ai KnownBoundary 0 23.78 8.35 16.35 6.69 7.13 7.67 2.25 0.00 3.56 4.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.40 0.00 0.00 8.21 11.78 52 ER2n ExonRegion 0 211.92 313.10 167.11 33.66 123.71 337.94 57.90 69.39 101.63 119.75 5.35 0.00 4.44 0.00 113.93 0.00 1.18 0.00 6.54 8.09 1.81 62.77 18.14 53 E2_Df KnownBoundary 0 0.00 0.00 12.63 2.06 6.45 2.67 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E2f_E2k KnownJunction 0 518.83 555.23 196.09 35.39 159.68 388.58 73.22 96.98 128.79 131.70 5.11 0.00 0.00 0.00 206.32 0.00 0.00 0.00 3.95 11.38 0.00 103.36 25.61 55 ER2o ExonRegion 0 17.54 2.57 8.70 2.82 2.94 3.05 0.41 0.80 3.48 2.79 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.58 0.00 0.67 0.00 0.00 0.00 56 E2_Aj KnownBoundary 0 13.48 0.00 6.65 0.00 0.00 7.27 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E2_Ak KnownBoundary 0 9.93 0.00 1.24 0.00 3.65 0.00 0.00 0.00 3.01 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER2p ExonRegion 0 440.24 481.96 216.89 36.80 144.49 386.93 64.87 84.69 132.16 147.95 7.73 0.00 0.00 0.00 200.19 0.00 0.00 0.00 3.19 12.77 2.20 104.18 32.30 59 ER2q ExonRegion 0 811.01 773.43 220.48 47.11 128.66 290.37 60.09 106.19 152.51 175.04 7.40 0.00 5.26 0.00 170.63 0.00 0.90 0.00 8.79 10.48 1.24 111.02 35.97 60 E2_Dg NovelBoundary 0 846.89 1478.55 340.17 64.16 210.10 343.33 93.76 169.18 210.07 197.41 6.69 0.00 13.47 0.00 192.47 0.00 0.00 0.00 0.00 18.02 0.00 122.10 39.27 61 E2h_E3a KnownJunction 0 407.26 1212.22 346.56 84.64 276.49 636.34 149.67 195.14 245.31 237.89 4.95 0.00 0.00 0.00 80.60 0.00 4.77 0.00 7.91 15.66 0.00 88.97 19.21 62 E2h_E4a KnownJunction 0 2.89 25.46 40.24 5.66 4.33 10.56 3.49 13.72 19.79 11.55 2.37 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 6.52 0.00 20.45 4.35 63 ER2r ExonRegion 0 513.61 1292.17 340.30 71.55 225.88 490.62 110.00 190.49 230.97 227.90 8.86 0.00 1.56 0.00 207.68 0.00 2.89 0.00 3.19 24.38 0.00 118.67 32.79 64 ER3a ExonRegion 0 172.37 477.29 322.49 69.22 297.71 473.55 87.12 179.07 227.36 220.74 1.71 0.00 13.35 0.00 164.64 0.00 0.89 1.30 13.60 18.77 0.00 113.71 38.34 65 E3_Da KnownBoundary 0 17.86 15.26 5.12 8.69 17.83 41.23 11.61 12.36 11.20 9.29 0.00 0.00 0.00 0.00 14.46 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 66 E3a_E4a KnownJunction 0 145.58 344.61 323.70 87.14 291.51 413.40 49.59 191.32 238.89 211.35 5.05 0.00 6.82 0.00 159.71 0.00 0.00 0.00 33.98 14.13 0.00 180.52 78.36 67 E3_Db KnownBoundary 0 0.00 15.33 4.26 1.56 3.40 11.30 0.00 2.14 4.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 2.97 0.00 0.00 68 E3b_E4a KnownJunction 0 2.96 17.69 25.96 15.75 39.13 19.59 7.86 14.79 19.85 18.51 0.00 0.00 0.00 0.00 37.09 0.00 0.00 0.00 0.00 0.00 0.00 27.07 0.00 69 ER3b ExonRegion 0 15.30 34.26 26.02 15.31 34.17 43.87 9.27 19.54 24.13 18.35 0.00 0.00 0.00 0.00 38.16 0.00 0.00 1.85 0.00 2.13 0.00 19.71 0.00 70 ER3c ExonRegion 0 19.17 13.91 7.95 0.93 3.36 7.01 1.84 1.79 5.41 3.11 0.00 0.00 0.00 0.00 0.98 0.00 0.00 0.58 0.00 1.80 0.57 1.08 0.76 71 ER4a ExonRegion 0 121.97 343.93 320.26 90.52 146.56 221.49 45.81 174.26 216.86 208.48 6.50 0.00 5.33 1.24 223.26 0.00 0.00 0.00 9.27 23.66 0.62 200.49 52.03 72 E4_Da KnownBoundary 0 242.93 516.55 322.93 52.64 163.75 284.67 43.94 140.51 186.75 145.46 4.74 0.00 0.00 0.00 142.16 0.00 0.00 0.00 0.00 9.08 5.75 123.57 12.04 73 ER4b ExonRegion 0 881.24 797.56 186.11 51.07 214.32 271.49 50.10 88.56 118.68 103.13 5.51 0.00 6.75 0.79 108.17 0.00 0.00 0.00 7.51 9.05 0.90 124.16 35.21 74 ER4c ExonRegion 0 270.91 147.10 23.28 5.45 101.68 94.14 11.03 10.37 21.00 7.26 3.87 0.00 0.00 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 9.72 2.94 75 ER4d ExonRegion 0 249.75 126.08 22.06 5.45 99.00 80.69 9.27 10.37 18.53 5.73 1.93 0.00 0.00 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 8.33 0.00 76 ER4e ExonRegion 0 245.52 119.98 19.61 5.45 93.65 73.35 7.94 8.64 14.82 4.59 1.93 0.00 0.00 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 8.33 0.00 77 ER4f ExonRegion 0 173.03 82.87 15.32 4.43 64.22 47.68 6.62 6.91 9.88 4.30 0.48 0.00 0.00 0.00 5.08 0.00 0.00 0.00 0.00 0.00 0.00 5.21 0.00 78 ER4g ExonRegion 0 29.63 14.24 3.06 1.36 10.70 4.58 0.66 1.73 1.24 1.72 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00