Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-775D22.2 Gene 0 1.50 1.81 0.81 1.98 1.66 2.11 3.76 0.91 1.47 0.61 0.51 4.56 5.77 1.37 2.33 1.85 1.46 0.41 0.85 1.51 0.39 0.74 0.26 2 483283 Transcript 0 1.05 1.12 0.42 1.14 0.95 1.29 2.12 0.47 0.76 0.35 0.29 2.51 3.29 0.75 1.33 0.99 0.69 0.19 0.48 1.05 0.22 0.47 0.15 3 ER1a ExonRegion 0 0.00 0.00 0.48 0.00 0.00 0.96 1.73 0.67 0.96 0.00 0.00 1.13 0.00 0.35 0.00 0.78 1.73 0.48 0.00 0.00 0.00 0.54 0.00 4 E1_Da NovelBoundary 0 56.53 61.04 63.81 98.76 146.60 185.75 167.33 111.31 160.68 128.51 209.11 213.97 285.21 177.29 75.16 146.88 272.74 109.48 185.61 120.55 74.94 99.01 29.45 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E2_Aa NovelBoundary 0 14.60 58.41 46.89 52.47 75.72 57.01 80.95 39.14 76.79 64.23 80.23 71.42 77.75 92.24 36.34 109.03 114.26 70.22 46.40 36.69 51.65 22.84 30.73 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.07 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 0.00 0.00 1.42 12.42 0.00 0.00 22.83 9.90 7.20 3.71 2.42 19.21 6.82 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 2.39 0.00 10 ER3a ExonRegion 0 3.66 1.72 0.00 0.09 0.00 3.05 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.68 0.00 1.80 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 Ix_AR2 ActiveIntronRegion 0 9.89 23.15 3.76 9.97 20.29 4.12 6.10 6.39 5.51 2.08 3.15 13.37 28.25 5.60 9.75 5.25 4.54 3.02 5.20 3.47 0.90 1.70 0.00 13 E4_Aa NovelBoundary 0 3.78 15.26 10.44 38.32 27.08 0.00 8.35 14.25 11.02 10.07 10.48 13.95 13.64 16.30 5.07 4.36 4.77 3.90 4.61 6.33 0.00 2.51 3.84 14 ER4a ExonRegion 0 5.78 8.37 3.33 10.12 8.53 7.52 15.00 3.50 5.87 3.11 2.64 21.34 29.56 6.44 11.97 8.12 4.51 1.25 4.35 5.81 2.01 1.84 1.34 15 E4_Da NovelBoundary 0 17.78 23.81 2.72 12.69 66.21 11.36 31.89 3.33 9.26 18.00 17.48 12.60 38.63 7.00 9.64 6.58 4.77 1.78 9.22 6.33 2.35 15.00 8.54 16 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 7.13 6.50 6.34 10.92 11.65 5.80 16.40 13.15 12.71 9.60 9.14 31.61 24.97 14.97 14.20 12.03 9.10 2.32 7.59 4.85 1.27 5.81 1.40 18 Ix_AR1 ActiveIntronRegion 0 9.36 16.40 4.75 7.41 10.44 4.29 19.61 9.38 9.11 10.67 3.52 32.74 18.52 9.42 9.90 7.73 4.29 1.44 4.97 4.98 1.15 7.05 2.29 19 Ix_AR2 ActiveIntronRegion 0 5.91 5.68 6.70 12.24 8.64 4.16 18.04 13.72 13.98 11.20 6.08 32.55 27.08 16.45 11.79 10.12 5.19 2.65 5.29 3.72 0.58 8.37 1.03 20 Ix_SR1 SilentIntronRegion 0 8.90 5.15 5.48 10.05 14.39 3.98 14.17 10.35 8.82 7.37 8.18 32.97 11.71 15.38 11.95 24.63 15.05 1.23 15.26 4.34 3.33 4.27 0.49 21 Ix_AR3 ActiveIntronRegion 0 7.43 2.48 5.97 10.89 24.21 7.41 16.55 12.68 6.08 4.76 12.18 28.37 15.88 13.41 18.81 16.52 19.85 1.52 12.53 6.84 1.89 5.38 1.41 22 Ix_AR4 ActiveIntronRegion 0 7.11 5.06 7.07 11.12 10.65 8.90 13.34 15.38 16.72 9.57 15.39 30.79 33.46 16.11 18.74 10.72 10.68 2.97 7.53 5.82 1.37 2.33 1.83 23 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.02 0.00 0.00 0.00 0.12 0.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00