Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC073342.4 Gene 0 0.35 1.34 1.70 1.00 1.03 2.11 1.45 1.27 1.72 0.56 0.85 0.00 0.00 0.15 0.56 0.49 0.00 1.11 4.19 1.64 0.36 0.00 0.00 2 446192 Transcript 0 0.00 0.62 0.78 1.21 0.00 0.42 0.10 2.76 0.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.16 0.00 0.00 0.00 3 427392 Transcript 0 0.10 0.56 2.84 0.99 1.07 2.29 2.57 1.57 1.32 0.62 0.41 0.00 0.00 0.05 0.15 1.14 0.00 1.49 8.82 0.68 0.59 0.00 0.00 4 ER1a ExonRegion 0 0.00 1.24 0.22 0.42 0.00 0.83 0.20 0.91 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.42 0.00 0.32 0.00 0.00 0.00 5 E1_Da NovelBoundary 0 3.19 20.39 5.00 6.93 8.06 2.78 10.55 1.89 8.13 6.53 0.00 0.00 0.00 2.65 0.00 4.10 0.00 20.73 16.47 6.14 2.41 2.76 0.00 6 E1a_E4a KnownJunction 0 0.00 0.00 1.33 2.00 0.00 0.00 0.00 4.60 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.00 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E3_Aa NovelBoundary 0 3.78 0.00 6.98 5.39 0.00 0.00 3.58 0.00 3.04 1.56 7.63 0.00 0.00 5.24 0.00 8.54 0.00 7.38 13.84 15.72 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.00 1.45 1.66 0.18 0.22 1.46 0.75 2.29 1.18 0.95 0.00 0.00 0.35 1.07 1.07 0.00 1.88 6.08 1.16 0.29 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 3.67 3.86 3.74 4.83 8.04 4.03 3.27 3.20 0.00 0.00 0.00 0.00 0.00 3.93 0.00 5.14 37.37 0.00 3.15 0.00 0.00 12 ER4a ExonRegion 0 1.81 1.71 7.15 3.86 6.50 10.08 5.82 5.59 5.52 2.47 2.58 0.00 0.00 0.57 2.63 2.00 0.00 2.44 8.57 7.99 1.41 0.00 0.00 13 E4b_E5a KnownJunction 0 0.00 0.00 6.36 0.00 0.00 4.54 3.97 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 4.42 0.00 0.00 0.00 0.00 14 ER4b ExonRegion 0 0.00 0.00 6.13 1.36 2.68 3.67 2.65 3.46 1.24 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 3.19 2.13 0.00 0.00 0.00 15 I4 Intron 0 46.03 13.95 22.93 29.78 53.69 47.47 21.88 25.52 39.89 19.73 5.12 16.16 10.27 7.30 4.85 6.48 2.78 2.16 9.78 9.12 3.44 18.22 7.42 16 I4_AR1 ActiveIntronRegion 0 65.61 8.13 49.01 35.44 21.41 16.50 23.83 70.87 27.17 25.23 5.80 0.00 0.00 11.37 11.61 8.92 9.90 0.00 6.37 4.26 0.00 25.00 0.00 17 I4_AR2 ActiveIntronRegion 0 136.52 35.82 74.47 94.00 160.98 133.37 65.53 85.80 120.76 61.73 15.33 53.09 32.47 22.31 17.85 16.00 7.52 4.54 25.05 27.57 9.79 58.99 18.19 18 I4_SR2 SilentIntronRegion 0 94.40 24.02 39.84 48.03 118.30 100.43 43.90 48.25 89.66 48.06 13.07 22.60 18.31 21.89 10.46 33.46 10.24 6.63 29.45 17.34 16.59 40.35 29.69 19 Ix Intron 0 41.98 27.53 31.04 37.08 58.12 116.03 29.59 50.27 82.28 50.04 17.04 21.89 19.72 29.78 22.57 40.23 16.63 21.40 81.23 24.11 61.73 41.32 32.36 20 Ix_AR1 ActiveIntronRegion 0 42.46 27.87 31.42 37.54 58.85 117.47 29.95 50.90 83.28 50.66 17.24 22.16 19.87 30.15 22.83 40.74 16.83 21.66 82.24 24.41 62.49 41.83 32.76 21 Ix Intron 0 34.99 15.54 12.53 20.27 28.79 58.35 14.66 20.49 31.85 20.79 12.66 5.04 5.98 17.97 16.98 22.25 6.18 15.91 23.84 12.94 17.88 10.07 18.78 22 Ix_AR1 ActiveIntronRegion 0 38.27 17.00 13.70 22.17 31.48 63.81 16.03 22.41 34.83 22.73 13.84 5.52 6.54 19.65 18.57 24.33 6.76 17.39 26.07 14.15 19.55 11.02 20.54 23 Ix Intron 0 59.26 16.85 45.65 51.06 47.40 79.91 23.84 35.32 54.43 43.95 33.69 15.46 20.49 45.46 35.45 67.09 27.35 35.84 63.71 28.57 33.68 27.09 24.33 24 Ix_AR1 ActiveIntronRegion 0 59.58 16.94 45.90 51.34 47.66 80.36 23.97 35.52 54.72 44.19 33.88 15.55 20.61 45.72 35.65 67.46 27.50 36.04 64.05 28.73 33.87 27.24 24.47 25 Ix_AR3 ActiveIntronRegion 0 44.82 6.56 7.78 9.18 17.62 14.68 7.35 5.65 11.17 6.84 5.24 7.79 5.49 6.61 8.57 13.05 5.11 2.85 8.64 3.57 4.55 1.61 5.31 26 Ix_AR2 ActiveIntronRegion 0 15.91 8.24 5.99 13.07 23.62 9.68 11.50 12.42 12.25 8.77 2.49 16.62 18.04 7.85 7.41 6.55 6.93 1.90 7.88 3.62 1.53 4.37 2.08 27 Ix_SR1 SilentIntronRegion 0 15.61 3.70 8.31 23.40 43.32 11.69 17.45 10.86 21.20 12.93 4.78 9.19 22.21 10.89 5.26 20.66 10.21 1.26 6.64 8.97 3.18 5.56 4.57 28 ER5a ExonRegion 0 0.68 3.94 2.30 0.02 0.90 2.75 1.90 0.35 2.36 0.00 1.87 0.00 0.00 0.00 0.00 0.02 0.00 1.49 10.60 1.47 0.71 0.00 0.00