Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF777 Gene 0 16.38 34.97 110.25 50.09 18.09 44.48 23.66 41.69 55.06 53.14 76.34 36.43 44.80 91.12 95.39 66.19 64.30 96.92 67.57 43.26 54.48 37.47 33.92 2 247930 Transcript 0 2.49 3.64 10.17 4.39 1.76 6.82 2.89 4.08 5.51 4.66 18.72 5.10 2.64 16.44 19.84 11.88 8.53 8.81 8.74 3.94 11.02 4.06 5.13 3 440594 Transcript 0 3.70 11.08 36.65 13.85 5.02 11.00 6.79 10.35 10.50 16.38 18.39 7.04 16.45 18.95 28.70 14.86 13.62 18.38 24.13 7.86 12.65 10.20 4.77 4 314683 Transcript 0 0.00 0.00 5.04 1.98 0.00 0.00 0.00 0.00 0.90 4.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.42 6.26 6.88 0.18 2.76 12.69 2.43 3.95 7.16 1.61 1.85 0.00 0.00 0.73 0.91 0.94 0.00 3.82 4.31 4.73 0.69 1.39 1.74 6 E1_Ab KnownBoundary 0 6.22 2.57 10.20 3.06 14.09 11.36 3.62 6.90 7.75 0.00 0.00 0.00 0.00 2.47 8.90 0.00 4.30 7.88 13.37 8.37 0.00 0.00 0.00 7 ER1b ExonRegion 0 1.01 3.85 6.91 0.63 2.57 3.93 2.01 2.00 6.24 2.18 7.36 0.00 0.00 0.70 3.06 0.95 0.22 9.63 1.91 2.71 1.69 4.07 1.20 8 E1a_E2a KnownJunction 0 0.00 9.01 14.61 0.00 0.00 13.74 6.62 5.01 11.55 1.50 32.22 0.00 0.00 0.00 4.45 0.00 0.00 6.05 0.00 2.62 5.62 2.69 12.46 9 ER2a ExonRegion 0 12.57 47.93 114.34 52.18 24.06 57.35 31.97 51.49 66.43 71.15 94.93 55.67 65.86 119.36 96.13 85.62 85.23 105.48 95.17 55.11 77.25 50.06 44.74 10 E2a_E3a KnownJunction 0 34.60 48.22 193.07 114.20 51.44 53.21 60.06 66.50 103.79 95.55 128.09 62.27 41.23 92.88 126.09 125.10 81.25 136.13 66.83 69.41 78.46 104.83 71.96 11 ER3a ExonRegion 0 33.80 84.66 182.45 96.61 35.40 68.18 53.73 68.16 94.83 82.24 109.44 69.92 77.44 131.49 132.06 86.61 90.79 150.67 100.00 68.92 83.05 61.88 55.03 12 E3a_E4a KnownJunction 1 49.12 176.28 234.11 118.43 52.21 109.26 92.12 79.97 120.75 77.98 139.93 144.20 26.46 170.76 170.22 87.24 118.56 168.80 114.17 78.75 126.95 77.34 73.84 13 ER4a ExonRegion 0 29.02 107.51 167.07 85.92 44.57 69.97 49.01 58.93 96.98 77.27 126.15 78.92 61.26 125.78 134.63 97.35 95.90 156.95 88.07 59.89 84.65 56.51 66.92 14 E4a_E5a KnownJunction 0 36.75 69.92 265.13 111.41 46.26 78.70 80.07 79.48 101.71 104.33 107.24 87.63 81.98 151.86 148.46 91.51 99.77 173.44 120.00 53.24 101.01 61.66 47.72 15 I4_AR2 ActiveIntronRegion 0 11.53 7.20 5.88 4.77 1.31 0.94 2.73 5.24 1.56 5.27 0.87 4.92 4.15 1.18 5.83 6.56 5.81 0.00 1.69 3.04 3.33 1.11 2.51 16 E5_Aa NovelBoundary 0 14.67 2.50 3.19 0.00 0.00 0.00 9.32 2.51 1.39 6.26 2.68 6.75 6.82 0.00 0.00 0.00 4.77 6.76 0.00 5.69 5.87 0.00 4.35 17 ER5a ExonRegion 0 32.95 45.06 201.39 101.18 33.41 62.89 35.66 76.81 91.62 94.47 116.20 59.58 74.54 148.43 164.16 96.24 97.35 150.29 103.76 54.60 79.45 66.98 50.67 18 E5a_E6a KnownJunction 0 0.00 3.35 14.78 1.80 0.00 0.00 0.00 2.55 0.00 6.66 2.47 0.00 8.28 2.18 4.45 0.00 0.00 2.57 12.42 2.43 2.72 2.69 0.00 19 E5a_E6b KnownJunction 0 41.71 86.23 200.29 110.31 56.62 82.00 60.77 63.21 84.40 87.06 132.93 63.62 67.04 134.85 249.46 119.63 102.66 118.52 114.45 38.61 75.62 56.33 59.41 20 ER6a ExonRegion 0 7.41 18.81 58.51 25.89 10.03 22.01 13.57 18.15 21.00 26.09 34.31 14.07 24.62 35.73 52.95 29.72 27.23 34.18 35.84 13.30 22.59 17.71 9.54 21 ER6b ExonRegion 0 27.04 35.69 146.78 66.86 17.27 56.65 27.33 44.61 67.97 61.25 94.11 35.68 53.16 115.11 138.73 87.02 80.97 133.89 88.13 59.83 55.66 41.77 38.03 22 E6_Da KnownBoundary 0 22.23 27.23 172.35 86.74 25.47 76.60 31.53 48.96 53.67 55.36 82.28 18.16 26.95 86.53 142.90 125.86 71.25 154.08 65.51 26.21 46.64 21.80 60.52 23 E6a_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6c ExonRegion 0 15.46 22.31 123.44 45.59 13.59 39.32 16.37 45.80 50.29 44.09 76.22 21.08 32.32 77.79 103.47 66.52 58.59 106.83 48.08 41.01 54.12 32.89 30.75 25 E6_Db KnownBoundary 0 6.45 0.00 4.02 6.03 0.00 0.00 0.00 5.05 4.37 0.00 13.53 0.00 0.00 10.24 24.11 3.59 0.00 10.07 3.95 2.75 5.68 3.12 3.93 26 E6b_E6c NovelJunction 0 0.00 3.29 13.72 3.33 0.00 2.44 4.06 0.00 9.84 4.78 19.79 0.00 0.00 5.71 5.44 0.00 4.68 8.95 9.13 2.68 14.64 3.06 7.85 27 E6_Ac KnownBoundary 0 3.11 0.00 13.90 4.96 0.00 4.66 4.15 0.00 1.65 4.32 7.58 0.00 6.33 0.00 4.45 3.67 0.00 4.10 4.52 0.00 9.20 2.57 4.10 28 ER6d ExonRegion 0 9.52 3.05 20.83 9.54 0.00 7.34 3.97 6.05 8.03 5.16 35.76 4.33 7.04 29.23 43.52 22.29 13.20 14.78 15.93 4.26 17.63 6.25 8.81 29 ER6e ExonRegion 0 4.50 5.53 17.38 4.94 3.77 8.68 3.16 2.26 4.28 8.75 22.82 6.72 6.97 28.46 38.98 10.25 20.91 12.25 8.09 7.83 13.79 5.10 9.15 30 E6_Dc KnownBoundary 0 0.00 5.26 5.97 0.00 0.00 4.60 2.25 3.78 4.05 3.81 11.16 0.00 0.00 6.59 0.00 0.00 9.07 3.98 0.00 0.00 2.41 2.27 0.00 31 E6c_E6d KnownJunction 0 0.00 0.00 10.08 3.96 0.00 0.00 0.00 0.00 1.79 9.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 0.00 0.00 0.00 0.00 0.00 32 E6_Ad KnownBoundary 0 0.00 0.00 3.22 3.60 3.65 0.00 4.28 3.74 2.81 1.26 19.11 0.00 0.00 0.00 6.06 17.86 16.64 25.20 12.33 2.75 5.37 8.51 12.04 33 ER6f ExonRegion 1 0.00 4.07 9.80 4.09 4.28 3.67 3.97 3.46 4.94 10.55 34.79 4.33 0.00 29.88 28.43 20.80 19.81 16.63 10.19 6.38 17.63 8.33 8.81 34 ER6g ExonRegion 0 0.40 2.51 11.76 7.17 1.85 5.51 1.38 8.53 8.42 13.99 15.00 6.46 2.33 21.53 18.32 7.66 11.63 11.96 13.26 5.23 14.21 6.20 7.95 35 E6_Dd KnownBoundary 1 0.00 3.29 9.67 11.52 0.00 2.84 0.00 12.12 5.03 4.57 2.63 36.16 0.00 4.59 9.52 7.86 4.49 0.00 7.91 2.62 9.08 0.00 4.35 36 ER6h ExonRegion 0 0.00 1.16 3.15 3.77 0.00 3.57 1.18 2.87 1.90 1.31 2.49 11.75 3.52 5.92 6.48 3.50 1.12 0.00 4.55 0.38 8.15 0.26 1.15