Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP6V0E2 Gene 0 37.25 102.81 233.17 139.27 88.01 259.99 99.33 222.36 426.88 163.59 85.60 7.28 15.93 78.27 83.10 44.13 59.16 212.35 184.72 118.86 28.06 9.78 12.12 2 421974 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 456496 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 425642 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 307445 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 429743 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 464683 Transcript 0 0.62 0.59 1.33 0.90 2.72 1.07 5.20 1.47 0.53 1.03 2.26 0.00 0.56 1.83 0.32 3.42 1.92 0.80 1.39 1.24 0.00 0.00 0.00 8 479613 Transcript 0 0.00 0.00 0.00 3.63 0.00 2.56 1.85 2.55 12.50 9.03 0.00 0.00 0.00 4.59 0.00 0.00 4.11 6.22 3.86 0.00 0.00 0.00 0.00 9 471877 Transcript 0 2.19 0.96 2.22 0.01 1.46 0.01 0.37 0.28 0.84 1.23 1.08 0.00 0.00 2.22 1.89 1.70 0.02 0.00 2.53 0.00 0.00 0.00 0.00 10 464662 Transcript 0 1.23 1.19 1.23 6.29 2.42 5.11 6.74 0.59 3.37 5.53 2.04 0.00 0.00 1.49 0.65 4.64 3.83 0.82 1.67 4.46 0.55 0.00 0.00 11 483478 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.05 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.12 0.08 0.00 0.00 0.00 12 495408 Transcript 0 0.00 0.00 3.34 1.93 2.42 0.65 2.85 1.70 1.75 2.61 0.50 0.00 0.00 0.32 0.00 0.02 0.81 2.15 0.00 0.72 0.00 0.54 0.00 13 490092 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1a ExonRegion 0 0.66 0.64 3.14 2.75 2.65 1.74 2.74 2.68 5.20 2.76 0.71 0.19 1.18 1.56 0.36 0.35 1.08 3.02 0.87 2.35 0.46 0.43 0.61 15 E1_Ab KnownBoundary 0 0.00 0.00 4.70 0.00 0.00 0.00 2.21 0.00 5.93 0.00 4.42 0.00 0.00 0.00 0.00 0.00 3.74 2.11 0.00 2.68 0.00 0.00 0.00 16 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 16.87 0.00 0.00 1.79 0.00 0.00 0.00 0.00 4.94 0.00 7.69 0.00 2.11 8.66 3.26 0.00 0.00 0.00 17 ER1b ExonRegion 0 0.00 2.03 3.79 0.97 0.00 16.62 2.78 0.28 7.85 0.07 2.93 0.00 0.00 3.30 0.09 5.94 4.15 6.44 6.68 5.49 0.92 0.00 0.00 18 E1_Ad KnownBoundary 0 0.00 3.09 1.77 0.00 0.00 2.90 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 3.26 0.00 0.00 0.00 19 E1_Ae KnownBoundary 0 2.82 22.69 18.39 7.92 10.27 164.73 39.66 3.12 23.35 8.00 12.27 0.00 0.00 11.48 4.70 0.00 12.53 31.09 43.11 2.43 0.00 5.20 0.00 20 ER1c ExonRegion 0 0.77 15.34 12.81 4.34 3.89 92.52 22.03 0.63 17.29 3.86 9.66 0.00 0.00 8.12 12.40 5.94 8.40 25.20 31.56 6.38 2.20 2.46 0.53 21 ER1d ExonRegion 0 5.29 25.08 21.65 7.50 11.15 206.00 34.42 4.61 26.35 6.31 12.89 0.00 4.69 14.89 19.34 3.96 10.45 40.96 37.16 11.35 2.20 4.17 2.94 22 ER1e ExonRegion 0 18.77 38.43 147.27 50.84 70.10 478.52 116.79 122.29 250.38 124.95 67.88 4.58 21.88 47.89 63.81 29.10 47.58 202.29 156.95 98.98 18.49 8.31 11.46 23 E1a_E4a KnownJunction 1 17.34 8.68 318.20 112.91 23.68 15.16 4.15 266.94 558.59 308.35 165.67 24.76 19.48 103.48 94.57 26.23 127.91 166.64 316.15 246.72 44.85 14.21 7.68 24 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.05 0.00 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.12 0.08 0.00 0.00 0.00 25 ER3a ExonRegion 0 0.00 0.79 7.04 6.55 0.55 0.47 3.94 1.45 5.23 2.05 0.75 0.00 0.00 1.60 0.00 0.00 2.63 2.13 1.23 1.40 0.00 0.00 0.00 26 E3_Da KnownBoundary 0 0.00 0.00 2.99 6.76 4.33 2.73 7.82 2.55 2.58 4.75 0.00 0.00 0.00 4.94 0.00 0.00 0.00 6.88 0.00 5.11 0.00 0.00 0.00 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER3b ExonRegion 0 0.00 0.00 6.68 3.87 4.83 1.29 5.70 3.40 3.49 4.15 1.01 0.00 0.00 0.65 0.00 0.03 1.62 4.30 0.00 1.43 0.00 1.08 0.00 29 E3b_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER4a ExonRegion 0 15.92 15.04 396.74 154.77 23.58 63.72 18.87 356.93 643.31 321.40 166.51 30.49 25.89 152.13 174.50 54.06 103.43 233.09 461.48 244.68 47.43 26.04 12.60 31 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E4a_E6a KnownJunction 0 41.79 40.52 427.28 185.79 22.75 113.29 15.68 445.12 728.00 302.98 200.16 29.71 20.45 110.07 198.16 46.74 110.33 393.52 572.53 234.96 52.45 24.13 29.36 33 E4a_E8a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 8.73 0.00 0.00 0.00 0.00 0.00 4.27 4.77 0.00 0.00 2.88 0.00 0.00 0.00 34 ER5a ExonRegion 0 1.85 1.77 3.98 2.69 8.16 3.21 15.59 4.42 1.60 3.09 6.77 0.00 1.68 3.07 0.97 10.26 5.76 2.40 4.17 3.71 0.00 0.00 0.00 35 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER6a ExonRegion 1 18.68 34.95 370.42 135.20 37.62 175.35 27.00 328.21 632.95 265.82 167.88 12.05 21.48 128.54 147.46 33.99 100.08 348.47 296.28 185.26 55.80 5.07 17.32 37 E6_Da KnownBoundary 1 24.97 76.63 333.40 117.03 110.19 431.80 59.71 281.93 609.40 256.48 194.21 14.55 32.79 120.31 138.82 48.53 137.91 426.18 289.23 188.17 62.89 5.69 30.73 38 E6a_E8a KnownJunction 0 0.00 0.00 0.00 3.63 0.00 2.56 1.85 2.55 12.50 9.03 0.00 0.00 0.00 4.59 0.00 0.00 4.11 6.22 3.86 0.00 0.00 0.00 0.00 39 ER6b ExonRegion 0 12.94 74.78 333.61 125.70 109.40 479.50 82.99 287.43 603.47 250.65 146.50 13.68 33.90 95.34 114.01 46.47 81.40 360.56 193.66 135.64 63.96 6.01 25.43 40 E6_Db KnownBoundary 0 3.33 0.00 9.40 6.06 0.00 10.79 2.25 6.45 9.11 11.77 4.90 0.00 0.00 0.00 0.00 4.19 0.00 2.20 0.00 2.62 2.47 0.00 0.00 41 E6b_E7a KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E6b_E8a KnownJunction 0 13.41 114.32 453.38 196.28 126.66 711.81 168.92 422.57 797.76 328.63 117.24 19.81 21.91 91.35 57.98 42.04 51.99 409.06 193.23 151.36 68.20 5.63 8.28 43 ER6c ExonRegion 0 1.23 1.19 1.23 6.29 2.42 5.11 6.74 0.59 3.37 5.53 2.04 0.00 0.00 1.49 0.65 4.64 3.83 0.82 1.67 4.46 0.55 0.00 0.00 44 Ix Intron 0 14.03 1.56 8.38 6.21 10.23 5.61 27.01 6.57 14.55 6.10 2.46 0.91 0.98 5.12 1.65 6.06 9.26 3.28 4.87 7.05 1.12 0.00 0.00 45 Ix_AR1 ActiveIntronRegion 0 14.17 1.57 8.47 6.28 10.32 5.67 27.28 6.63 14.70 6.16 2.49 0.92 0.99 5.17 1.67 6.12 9.35 3.31 4.92 7.12 1.14 0.00 0.00 46 E7_Aa NovelBoundary 0 16.30 0.00 28.30 9.56 15.20 17.43 6.32 20.95 29.51 16.20 11.42 0.00 0.00 0.00 0.00 18.71 7.57 7.17 20.52 9.40 0.00 0.00 0.00 47 ER7a ExonRegion 0 2.93 0.31 1.61 0.02 4.37 0.03 1.10 0.84 0.80 1.34 3.25 0.00 0.00 6.66 5.66 5.10 0.06 0.00 7.59 0.00 0.00 0.00 0.00 48 E7_Da NovelBoundary 0 16.30 12.56 31.16 9.06 11.38 12.61 14.66 16.14 40.36 20.82 7.11 6.30 0.00 11.83 0.00 8.54 4.49 17.53 16.47 26.33 0.00 3.12 0.00 49 E7a_E8a KnownJunction 0 3.63 2.57 3.22 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E8_Aa NovelBoundary 0 6.67 6.38 25.07 13.38 11.29 7.50 45.36 14.33 41.49 23.24 5.00 0.00 0.00 2.47 0.00 11.54 0.00 13.18 8.94 20.58 3.15 2.88 0.00 51 ER8a ExonRegion 0 20.06 131.92 456.53 189.38 152.75 889.31 280.51 436.10 746.22 334.15 182.95 37.84 24.06 119.27 119.08 81.02 105.05 394.05 330.31 214.06 82.88 18.30 16.09 52 ER8b ExonRegion 0 48.15 184.65 380.22 164.52 100.76 574.94 211.13 350.03 671.19 300.85 179.76 18.88 35.37 181.82 141.39 53.27 122.73 356.44 289.35 205.85 67.56 15.38 21.79 53 E8_Db KnownBoundary 1 51.79 218.78 269.71 124.86 92.61 453.60 209.38 269.65 531.68 214.30 119.77 17.86 33.28 165.46 117.31 28.03 103.32 331.09 180.62 211.95 46.89 11.51 29.71 54 E8_Dc KnownBoundary 0 94.02 132.34 491.05 274.52 94.65 444.52 181.29 491.25 832.54 366.16 182.57 12.00 55.03 158.93 196.55 126.04 149.23 522.11 339.02 275.93 52.26 12.19 32.44 55 ER8c ExonRegion 0 57.92 158.69 421.45 209.38 90.53 425.07 181.47 390.69 775.03 349.31 166.62 9.38 48.93 160.35 166.63 82.03 126.42 456.39 255.57 258.58 57.08 11.32 30.25 56 ER8d ExonRegion 1 79.87 210.81 500.38 226.84 138.20 536.02 213.62 488.25 933.65 397.78 217.14 8.50 17.35 211.30 196.78 97.60 171.28 493.00 341.63 261.70 61.26 15.63 35.68 57 E8_Dd KnownBoundary 0 89.79 340.01 457.20 243.29 119.02 524.07 252.43 469.27 955.46 372.39 191.47 12.30 20.45 252.58 242.91 74.85 145.39 467.72 389.94 248.51 49.24 10.72 25.27 58 ER8e ExonRegion 0 94.62 257.57 529.01 349.93 220.00 539.06 220.34 514.13 985.58 353.54 178.58 14.65 32.58 165.36 183.44 104.69 123.08 467.85 418.76 261.23 57.91 22.79 25.64 59 ER8f ExonRegion 0 2.12 8.64 8.88 17.04 25.42 51.35 18.20 19.88 29.64 8.89 2.90 0.00 4.69 11.77 10.88 5.94 3.30 10.16 0.00 11.70 1.10 0.00 1.47 60 ER8g ExonRegion 0 2.12 2.03 3.68 6.81 13.38 34.84 11.92 10.37 16.06 8.03 1.93 0.00 4.69 3.25 2.90 5.94 3.30 7.39 0.00 8.51 0.00 0.00 0.00 61 ER8h ExonRegion 0 0.53 2.03 2.76 2.04 2.01 11.00 6.29 6.48 9.88 4.30 0.48 0.00 2.35 1.22 0.00 3.72 1.65 2.77 0.00 3.19 0.00 0.00 0.00