Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM140 Gene 0 42.62 7.17 21.88 15.98 24.34 23.24 19.08 22.71 30.80 30.92 67.71 36.65 42.01 159.03 189.48 91.58 134.70 32.11 34.43 23.92 50.72 33.06 22.44 2 275767 Transcript 0 34.93 3.14 16.49 15.12 15.76 18.45 11.53 18.09 28.99 20.73 60.23 42.52 49.72 214.10 232.26 94.53 179.04 17.15 19.82 14.51 47.93 33.82 22.90 3 466307 Transcript 0 13.49 0.82 9.28 1.64 3.02 0.15 2.78 2.70 4.45 1.93 1.56 3.64 6.38 2.05 9.46 4.56 4.27 0.22 0.00 0.52 0.00 1.35 0.24 4 456488 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 46.31 0.00 3.06 4.32 16.83 18.71 8.64 12.94 22.12 3.38 33.28 15.82 29.73 120.97 181.89 93.62 148.70 0.77 0.00 0.75 20.40 13.36 12.88 6 E1_Ab KnownBoundary 1 60.31 0.00 0.00 1.86 41.17 13.34 4.50 8.38 18.55 3.89 25.22 54.77 89.44 92.83 185.06 86.47 193.45 2.32 0.00 6.39 22.80 9.06 7.77 7 ER1b ExonRegion 1 28.45 0.00 6.88 7.29 10.38 10.10 1.32 7.54 25.76 6.41 59.38 46.64 47.15 108.04 128.39 65.58 222.83 0.59 0.04 3.09 32.85 24.64 11.63 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E3a KnownJunction 1 10.37 0.00 11.68 15.42 0.00 0.00 2.03 8.42 25.67 4.78 53.49 67.67 71.75 219.20 220.90 68.36 234.97 0.00 0.00 0.00 47.45 25.11 18.18 10 Ix_SR2 SilentIntronRegion 0 20.00 0.40 7.55 2.79 6.32 0.72 3.91 5.58 3.62 1.35 0.00 6.42 13.04 2.95 12.53 4.10 11.70 0.54 0.00 0.42 0.43 0.41 0.00 11 E2_Aa NovelBoundary 1 107.57 0.00 32.94 8.89 12.22 0.00 14.66 15.40 10.36 0.00 2.68 25.96 33.93 19.13 23.73 0.00 26.55 0.00 0.00 3.26 2.29 0.00 0.00 12 ER2a ExonRegion 0 26.99 1.64 18.57 3.28 6.05 0.30 5.56 5.40 8.91 3.86 3.12 7.29 12.76 4.10 18.92 9.11 8.53 0.44 0.00 1.03 0.00 2.69 0.47 13 E2_Da NovelBoundary 0 52.82 41.37 235.62 271.76 21.05 16.24 64.26 184.30 180.61 147.47 7.32 0.00 6.49 0.00 0.00 4.10 8.98 51.40 17.51 57.65 11.06 13.17 11.18 14 Ix Intron 0 33.37 27.28 42.61 23.42 45.65 30.43 37.73 29.04 33.87 47.18 42.73 31.54 22.58 43.99 33.58 33.47 34.48 26.59 33.12 32.32 30.34 29.25 22.14 15 Ix_AR1 ActiveIntronRegion 0 37.02 30.96 48.24 26.57 51.36 34.27 42.20 32.71 37.87 53.28 48.25 34.56 24.46 49.31 37.27 37.31 38.20 30.20 37.56 36.40 34.34 33.04 25.04 16 E3_Aa NovelBoundary 0 13.26 14.73 20.99 4.73 28.44 48.27 25.13 35.20 28.59 49.99 102.71 37.21 67.20 96.24 54.76 64.68 57.97 67.82 49.70 56.69 71.66 43.05 23.82 17 E3_Ab NovelBoundary 0 6.00 15.72 44.26 29.17 8.66 35.66 23.41 45.30 44.68 41.42 93.08 50.42 59.25 384.31 301.38 142.18 194.02 52.02 34.73 49.47 66.72 60.38 53.86 18 ER3a ExonRegion 0 6.52 0.89 16.52 13.47 4.07 7.34 7.15 19.08 32.61 17.02 64.64 53.34 51.40 327.81 290.47 106.28 211.13 10.42 14.78 13.11 50.60 38.42 32.07 19 ER3b ExonRegion 0 29.23 10.38 37.82 25.84 38.36 39.40 32.12 38.01 55.24 62.60 124.85 61.52 63.85 246.36 311.44 169.22 199.48 71.88 81.25 53.18 105.70 54.43 36.73 20 E3_Da KnownBoundary 0 71.49 19.01 30.75 22.84 48.73 37.82 31.80 28.75 42.10 61.65 109.55 28.96 32.95 228.91 260.34 149.96 199.91 84.27 75.77 65.20 91.62 50.82 55.83 21 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3c ExonRegion 0 65.48 5.68 35.10 27.05 29.79 43.31 20.07 27.30 37.90 48.67 83.03 38.11 50.88 247.97 288.31 116.84 178.45 43.09 51.14 35.47 76.62 59.96 28.76 23 E3_Ac KnownBoundary 0 98.09 6.71 45.36 47.15 26.57 35.15 28.09 41.44 42.53 66.43 100.60 30.16 30.36 232.15 247.73 97.24 169.99 50.32 66.54 13.93 63.88 61.72 24.41 24 ER3d ExonRegion 0 72.39 12.51 45.77 32.93 25.86 39.83 36.40 41.61 57.71 56.60 119.35 52.45 44.02 300.05 313.50 128.91 245.94 62.06 59.88 42.19 101.15 59.04 46.19 25 E3_Db KnownBoundary 0 78.53 18.42 63.60 63.76 59.85 40.43 51.10 60.58 76.16 63.05 183.89 104.43 71.91 347.40 426.73 227.80 287.70 89.54 83.30 58.55 92.54 107.34 61.38 26 ER3e ExonRegion 0 45.99 9.10 16.12 15.35 28.11 22.89 19.76 22.72 26.66 29.82 66.72 37.65 44.86 154.55 179.72 87.56 121.95 31.46 33.20 23.21 44.59 32.27 22.58