Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CHCHD3	Gene	0	62.74	67.87	131.50	63.38	123.91	110.93	163.25	51.66	83.70	114.15	212.82	157.17	145.55	199.21	191.46	133.80	203.12	115.89	177.27	104.16	79.75	89.57	64.86
2	457942	Transcript	0	1.91	1.50	1.48	0.92	2.16	3.42	4.71	1.43	2.47	1.56	1.84	3.06	2.60	3.02	2.15	1.28	4.78	5.03	3.11	0.96	1.26	0.10	0.21
3	262570	Transcript	1	77.46	88.66	22.30	14.99	19.62	17.60	25.24	12.68	12.35	11.32	11.47	33.48	5.00	8.45	39.46	3.96	6.82	1.11	12.74	3.69	0.00	12.50	2.74
4	423635	Transcript	0	1.12	1.77	1.35	1.79	1.61	1.18	3.35	1.04	1.68	1.74	0.99	4.71	2.08	1.87	0.72	1.44	1.89	1.57	1.83	2.83	0.20	0.46	0.74
5	476546	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	466644	Transcript	0	3.12	1.78	3.08	4.69	5.12	2.11	15.53	2.19	4.66	2.74	0.86	11.15	6.39	1.07	2.30	2.10	3.84	1.27	3.41	4.45	1.13	1.46	2.51
7	448878	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	481152	Transcript	0	2.55	3.17	12.84	7.71	3.81	4.92	12.21	6.99	16.65	13.53	22.79	10.57	7.90	38.99	26.88	24.27	22.19	24.04	32.75	18.93	12.62	16.04	16.09
9	496427	Transcript	0	0.00	0.00	0.02	0.00	0.02	0.63	0.86	0.00	1.78	0.57	0.00	0.11	0.00	0.01	2.09	1.92	0.00	0.00	0.00	0.69	0.01	0.00	0.00
10	ER1a	ExonRegion	0	2.12	0.58	0.53	0.58	3.06	8.38	6.24	0.74	0.00	0.33	2.21	0.00	0.67	8.12	4.56	1.27	8.02	9.77	3.19	0.61	2.83	0.30	0.00
11	E1_Af	KnownBoundary	1	86.53	51.83	38.85	10.52	206.54	400.17	268.51	12.16	14.99	27.43	162.73	0.00	12.82	357.06	216.95	185.59	211.78	111.59	168.57	51.52	60.23	80.03	85.45
12	ER1b	ExonRegion	1	20.81	10.85	10.01	3.86	73.58	111.10	72.16	2.45	2.37	7.17	45.10	0.00	8.60	94.06	54.88	36.90	67.94	38.19	29.73	11.17	16.90	13.37	14.19
13	ER1c	ExonRegion	1	27.51	16.27	13.48	4.09	109.71	185.21	104.59	3.46	3.71	11.47	65.72	0.00	9.38	168.10	89.94	60.93	99.03	50.81	47.78	17.02	26.44	18.75	23.49
14	ER1d	ExonRegion	1	45.60	25.51	24.84	8.92	123.57	234.23	157.67	5.03	10.22	19.71	101.74	3.94	9.38	246.57	142.69	111.05	144.64	79.12	104.54	33.66	43.87	42.43	45.65
15	ER1e	ExonRegion	1	117.82	74.56	52.69	27.26	201.57	419.94	361.88	25.93	42.41	51.99	257.08	8.66	14.07	453.67	363.62	275.42	299.28	152.75	247.40	112.06	108.72	93.76	125.30
16	ER1f	ExonRegion	1	55.38	53.46	92.54	34.76	98.26	185.87	179.15	50.86	82.77	108.10	292.66	34.11	23.69	246.54	184.03	173.33	280.46	186.12	212.77	151.77	129.24	81.19	86.95
17	E1a_E2b	KnownJunction	1	38.08	76.83	195.32	101.35	62.05	75.07	78.96	99.03	162.64	215.11	375.73	163.10	66.23	683.50	461.96	411.35	351.85	341.08	578.75	305.33	164.82	262.14	212.47
18	E1a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I1_SR2	SilentIntronRegion	0	2.52	0.09	8.33	8.84	4.78	4.23	7.87	15.00	20.02	6.24	1.86	3.68	4.22	7.63	0.54	3.55	3.44	2.85	7.62	5.00	0.80	3.51	1.07
20	ER2a	ExonRegion	0	4.59	9.15	31.86	13.86	8.47	11.00	10.15	16.13	26.97	36.51	65.72	23.09	14.07	107.19	76.40	63.41	57.22	60.98	87.07	46.10	26.81	37.85	36.22
21	ER2b	ExonRegion	1	30.12	39.67	205.72	75.18	51.61	68.34	86.21	80.05	160.28	215.14	258.43	94.95	50.13	408.68	335.71	356.31	280.92	345.44	384.95	237.00	136.81	161.72	165.36
22	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.81	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E2a_E5a	KnownJunction	1	36.82	46.37	237.22	67.06	151.53	218.57	143.84	74.55	130.70	196.98	304.66	70.82	25.49	340.34	147.35	162.35	375.13	152.09	147.39	198.08	152.40	106.24	73.33
24	ER3a	ExonRegion	0	0.00	0.00	0.03	0.00	0.03	1.25	1.73	0.00	3.56	1.13	0.00	0.22	0.00	0.02	4.19	3.84	0.00	0.00	0.00	1.37	0.03	0.00	0.00
25	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER4a	ExonRegion	0	3.61	3.91	3.91	2.17	3.41	1.89	7.89	1.74	5.95	4.37	3.32	9.17	7.12	0.93	1.89	2.57	6.31	5.33	6.13	2.27	0.94	0.00	0.63
27	E4_Da	NovelBoundary	1	1858.26	3390.25	19251.21	12702.78	1290.49	1196.92	590.15	9528.81	3988.15	10742.85	14498.94	1566.96	1326.70	7825.69	8565.45	5950.49	12129.11	6389.67	17142.33	6959.11	16264.74	6125.62	5386.16
28	I4_AR1	ActiveIntronRegion	0	275.00	547.86	381.74	323.04	193.88	226.75	113.88	187.37	93.80	204.15	183.52	45.05	64.77	165.81	235.20	119.57	115.22	119.18	93.88	104.77	166.68	56.73	92.54
29	E5_Ab	NovelBoundary	0	15.41	29.73	144.02	37.56	103.40	149.91	139.77	50.32	94.30	131.19	295.29	47.72	80.19	84.53	68.98	41.53	267.23	93.35	35.95	102.27	116.88	45.93	29.02
30	ER5a	ExonRegion	1	26.54	41.92	234.23	66.15	135.23	228.24	163.15	73.79	140.42	211.74	393.42	68.27	54.84	271.35	126.32	133.29	390.52	180.23	112.47	178.56	180.87	95.52	64.83
31	ER5b	ExonRegion	0	65.98	91.33	268.92	98.34	253.58	502.57	529.39	103.98	184.21	270.24	633.79	224.88	192.29	390.97	278.44	235.06	558.09	252.63	279.94	249.24	272.30	159.86	122.79
32	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	12.30	0.00	5.36	0.00	4.36	4.39	0.00	0.00	0.00	0.00	0.00	0.00
33	E5a_E7a	KnownJunction	0	105.50	175.76	299.01	126.52	268.25	545.48	713.89	115.95	214.20	296.29	579.67	343.76	269.46	612.16	487.79	370.84	667.88	287.27	461.66	327.45	274.79	219.09	190.70
34	ER6a	ExonRegion	0	0.00	2.30	0.00	0.00	3.09	1.04	1.65	2.84	3.06	2.91	3.29	7.02	0.00	2.17	0.03	0.86	2.46	0.00	1.63	3.81	0.05	0.88	0.00
35	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.83	0.00	0.00	0.00	0.00	0.00	5.88	0.00	2.69	0.00
36	ER7a	ExonRegion	0	133.84	112.35	264.37	86.16	175.81	201.55	235.62	91.39	163.71	232.53	569.39	342.32	260.38	552.46	409.59	358.72	626.30	275.28	369.50	245.69	274.46	222.28	150.12
37	E7a_E8a	KnownJunction	0	0.00	0.00	1.39	2.06	0.00	0.00	4.33	0.00	13.05	0.00	0.00	0.00	0.00	4.83	0.00	0.00	3.74	4.15	4.80	3.13	9.02	5.39	3.84
38	E7a_E9a	KnownJunction	1	129.13	9.08	40.51	16.02	35.74	21.81	10.11	22.51	36.66	26.41	532.87	239.48	134.89	274.71	228.07	211.23	569.33	20.52	20.42	34.58	257.74	134.84	124.37
39	E7b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER7b	ExonRegion	0	1.98	1.90	6.94	3.73	3.39	1.96	6.88	2.88	4.28	8.56	1.03	5.77	0.31	0.87	0.39	2.38	2.20	10.35	7.01	4.82	2.35	0.00	5.87
41	ER8a	ExonRegion	0	3.07	0.35	5.27	7.20	2.97	3.76	22.17	4.84	9.93	4.09	2.64	8.62	9.62	4.94	4.23	9.39	5.61	6.99	6.37	7.57	2.03	4.89	8.21
42	I8_AR8	ActiveIntronRegion	0	11.81	5.15	5.67	8.01	4.93	3.70	49.83	12.61	7.70	7.01	4.92	0.00	3.00	1.98	4.81	9.29	9.90	17.93	22.50	18.45	1.52	2.41	6.88
43	I8_AR16	ActiveIntronRegion	0	13.61	4.65	12.95	9.93	0.38	0.00	24.21	0.00	3.88	4.59	0.00	0.00	0.00	0.00	11.19	10.19	0.00	5.54	0.00	4.26	4.41	0.00	0.42
44	I8_AR26	ActiveIntronRegion	0	9.52	2.03	9.80	3.29	18.06	0.00	10.15	5.19	18.94	10.32	0.00	6.85	0.00	0.00	0.00	5.20	0.00	9.24	15.66	6.21	0.00	0.00	0.00
45	I8_AR27	ActiveIntronRegion	0	14.01	2.03	5.48	3.83	12.49	1.14	8.76	3.29	17.76	7.65	0.00	10.72	4.69	0.00	4.84	7.93	3.30	6.78	6.98	5.88	0.10	0.00	0.00
46	I8_AR28	ActiveIntronRegion	0	17.36	3.05	4.90	2.73	4.82	1.83	6.09	3.46	14.08	5.96	0.00	10.82	4.69	0.00	5.80	9.51	3.30	4.07	3.19	3.40	2.20	0.00	0.00
47	I8_AR29	ActiveIntronRegion	0	6.71	5.67	6.79	9.93	9.16	4.45	14.58	11.65	18.37	11.13	0.87	7.03	7.10	0.17	2.38	8.64	4.61	5.47	10.35	5.05	1.92	0.30	3.87
48	I8_AR30	ActiveIntronRegion	0	16.27	5.59	6.43	4.86	12.88	1.49	26.56	17.18	28.41	14.62	2.05	0.00	0.00	1.62	0.00	3.34	6.19	0.00	3.98	3.59	0.00	0.00	2.94
49	I8_AR31	ActiveIntronRegion	0	13.91	13.65	6.13	8.18	13.38	5.50	40.29	19.01	27.70	13.76	5.80	10.51	1.34	1.62	0.83	5.94	3.30	0.00	2.28	6.38	0.00	0.00	2.94
50	ER9a	ExonRegion	0	121.55	161.96	278.03	106.11	196.89	187.09	312.72	112.39	172.05	265.70	745.66	317.18	308.31	491.90	423.48	354.21	751.66	338.51	594.64	273.61	318.75	255.16	176.20
51	E9a_E10a	KnownJunction	0	148.32	194.50	406.46	177.40	320.12	318.00	524.87	168.36	268.40	379.26	825.21	503.71	604.83	580.03	594.72	427.24	835.16	486.46	615.26	325.21	338.11	263.24	146.31
52	ER10a	ExonRegion	0	139.30	168.41	422.36	186.70	359.83	335.17	486.49	149.43	259.10	344.07	669.98	484.29	487.43	737.76	593.20	503.00	602.02	589.85	631.11	342.22	237.10	281.04	231.50
53	E10_Da	KnownBoundary	0	0.00	3.16	4.70	1.56	0.00	0.00	14.13	3.57	1.53	0.00	0.00	12.30	34.09	0.00	5.69	0.00	9.44	4.27	4.14	2.94	0.00	0.00	12.38
54	E10a_E11a	KnownJunction	0	0.00	3.16	2.96	3.86	0.00	0.00	0.00	0.00	0.00	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.07	0.00	3.26	0.00	0.00	0.00
55	E10a_E13a	KnownJunction	0	261.53	238.51	517.90	268.56	544.91	409.99	619.34	194.20	296.12	399.57	806.15	515.27	571.39	850.79	792.76	587.37	807.39	681.49	1011.04	491.46	333.47	379.40	357.16
56	ER10b	ExonRegion	0	3.12	1.78	3.08	4.69	5.12	2.11	15.53	2.19	4.66	2.74	0.86	11.15	6.39	1.07	2.30	2.10	3.84	1.27	3.41	4.45	1.13	1.46	2.51
57	I10_AR2	ActiveIntronRegion	0	14.96	4.64	5.37	10.60	7.57	3.19	17.28	14.28	13.61	11.71	2.73	8.78	3.48	1.28	7.68	8.08	9.33	8.69	11.08	7.87	2.16	0.68	5.11
58	I10_SR4	SilentIntronRegion	0	23.07	21.28	13.66	16.41	13.44	4.51	18.43	13.40	19.55	17.45	1.92	10.18	12.55	1.17	6.39	5.10	5.05	4.75	8.92	9.23	0.10	1.58	3.47
59	I10_AR4	ActiveIntronRegion	0	18.31	12.57	10.44	14.60	23.22	4.39	21.85	18.47	15.71	14.54	1.29	8.55	11.47	0.92	9.92	4.76	3.67	3.67	13.33	8.18	0.63	1.99	0.84
60	I10_AR5	ActiveIntronRegion	0	12.60	11.62	10.00	16.92	25.53	5.06	22.13	9.88	10.14	10.09	2.48	6.26	11.28	1.12	7.72	4.04	3.43	7.44	22.66	12.06	1.77	2.28	3.37
61	I10_AR6	ActiveIntronRegion	0	27.13	16.43	17.72	21.19	22.03	3.08	23.94	11.96	20.44	12.66	1.56	15.05	9.35	1.81	11.74	7.80	8.14	10.48	16.44	12.03	3.69	2.25	4.92
62	I10_SR6	SilentIntronRegion	0	8.83	12.37	14.13	16.85	15.07	4.90	18.09	15.10	18.46	15.21	2.75	10.06	7.87	3.05	9.08	5.17	11.85	15.91	16.67	9.75	2.17	3.28	3.42
63	I10_AR7	ActiveIntronRegion	0	13.32	10.51	8.88	8.62	12.31	6.09	16.17	11.22	14.88	11.44	2.72	13.16	1.84	1.77	7.67	10.62	5.38	15.45	14.02	8.93	4.16	0.91	5.02
64	I10_AR9	ActiveIntronRegion	0	3.17	23.05	3.68	6.59	2.68	0.00	19.42	3.46	11.94	3.63	1.61	0.00	0.00	3.25	2.90	9.41	6.60	4.31	9.56	8.51	2.57	0.00	0.00
65	ER11a	ExonRegion	0	3.59	3.37	1.55	3.78	2.66	1.21	9.67	2.57	5.60	4.26	3.83	7.14	7.49	1.27	1.51	3.92	4.37	5.50	9.35	3.25	1.46	0.00	4.86
66	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER12a	ExonRegion	0	5.38	5.31	6.30	6.68	7.11	2.41	13.81	2.91	3.43	3.94	0.79	11.25	9.14	1.32	4.21	2.39	3.88	5.02	3.67	6.43	0.10	0.08	1.09
68	E12_Da	NovelBoundary	0	25.56	28.81	14.22	21.94	32.09	13.34	63.51	18.20	17.85	10.56	0.00	63.02	6.82	4.94	13.35	11.71	11.97	9.04	27.67	17.51	5.62	0.00	4.10
69	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	4.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
70	ER13a	ExonRegion	0	142.71	154.61	577.33	268.17	342.36	348.85	460.36	198.77	312.03	425.80	808.70	572.35	701.88	744.93	636.68	500.04	772.46	628.93	789.95	369.54	327.95	306.34	240.01
71	E13a_E14a	KnownJunction	0	299.24	203.91	622.60	312.35	485.82	364.34	598.54	217.45	298.26	432.34	689.28	761.65	824.78	847.20	964.34	461.08	734.83	458.85	561.43	396.93	246.43	289.57	270.69
72	ER14a	ExonRegion	0	248.92	244.30	497.56	236.85	485.57	465.21	693.56	176.89	290.06	394.75	791.18	621.98	704.47	731.99	676.76	469.05	753.53	349.52	727.48	337.61	219.45	313.77	242.99
73	E14_Da	KnownBoundary	0	109.65	140.11	223.59	121.03	473.26	377.57	592.40	101.99	160.15	224.27	424.53	307.60	399.65	412.62	480.25	288.98	395.98	127.18	424.29	206.26	102.98	239.79	126.00
74	E14_Db	KnownBoundary	0	220.11	217.53	414.53	224.48	566.38	459.05	604.76	146.18	259.84	295.19	606.68	407.23	390.88	314.44	450.34	340.25	536.51	221.53	465.43	216.23	113.61	262.69	205.73
75	ER14b	ExonRegion	0	179.48	213.80	448.16	241.14	623.45	531.68	707.00	180.34	307.05	388.72	738.11	518.09	567.81	526.76	573.48	430.56	636.85	267.80	592.27	276.03	149.71	339.06	224.16
76	ER14c	ExonRegion	0	183.53	207.19	303.96	163.06	363.36	228.88	384.31	124.07	187.30	268.50	410.84	428.62	348.01	407.80	494.66	257.53	365.89	155.34	323.06	212.04	134.63	210.48	120.27
77	E14_Dc	KnownBoundary	1	415.56	449.66	127.41	66.86	155.35	97.84	163.98	58.82	89.03	100.89	38.33	121.24	165.41	57.98	185.43	26.66	37.68	5.14	71.91	72.23	2.41	77.58	11.78
78	ER14d	ExonRegion	1	139.98	171.28	45.34	30.05	53.15	33.34	55.25	29.15	35.48	32.90	21.35	77.93	55.43	30.49	111.57	9.86	13.35	1.85	25.77	29.11	0.00	34.76	6.67
79	ER14e	ExonRegion	1	77.46	88.66	22.30	14.99	19.62	17.60	25.24	12.68	12.35	11.32	11.47	33.48	5.00	8.45	39.46	3.96	6.82	1.11	12.74	3.69	0.00	12.50	2.74
80	IG29_SR2	SilentIntergenicRegion	0	1.18	11.90	3.05	2.83	7.46	3.58	7.75	8.57	30.74	13.30	0.54	3.97	3.69	0.75	2.71	0.83	3.68	9.98	14.20	34.34	0.00	0.58	4.09