Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-163E9.1 Gene 0 11.96 7.85 17.75 31.63 23.24 9.86 16.52 10.83 10.78 13.55 17.99 14.90 12.49 12.73 17.70 9.83 9.56 6.77 6.59 9.24 4.25 2.44 3.24 2 484974 Transcript 0 0.35 0.00 1.04 5.45 0.00 0.31 1.72 0.67 0.00 1.70 2.36 1.44 0.78 0.54 0.69 0.00 1.10 1.72 1.57 1.85 0.00 0.00 0.00 3 476426 Transcript 0 1.85 0.00 1.27 0.00 0.00 0.00 0.00 0.71 1.02 1.42 1.07 0.00 0.00 1.40 0.49 2.65 1.79 0.00 0.88 1.04 0.54 0.00 0.00 4 492837 Transcript 0 1.51 0.14 0.29 0.17 0.92 1.34 2.12 0.06 0.22 0.25 0.30 0.10 0.05 0.25 0.16 0.23 0.59 0.37 0.42 0.26 0.17 0.02 0.07 5 ER1a ExonRegion 0 0.00 0.00 0.00 1.17 0.00 0.00 0.00 0.00 0.00 0.33 0.55 0.00 0.00 0.00 2.07 0.00 0.00 0.53 0.00 2.13 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 1.07 1.68 5.34 0.00 0.00 1.05 1.00 0.00 2.02 5.24 0.00 0.00 0.38 4.35 3.13 0.00 2.48 2.68 2.30 0.41 0.00 0.00 7 E1_Da KnownBoundary 0 3.26 0.00 18.07 9.79 21.14 37.76 2.16 25.59 16.87 30.76 19.06 0.00 0.00 4.89 4.45 42.04 17.11 75.94 8.38 8.63 16.06 8.39 17.58 8 E1a_E2b KnownJunction 0 0.00 0.00 3.13 13.82 0.00 0.00 4.50 2.01 0.00 4.19 4.58 0.00 0.00 0.00 0.00 0.00 0.00 4.64 4.71 2.36 0.00 0.00 0.00 9 ER1c ExonRegion 0 3.70 0.00 2.54 0.00 0.00 0.00 0.00 1.43 2.04 2.84 2.14 0.00 0.00 2.81 0.98 5.30 3.59 0.00 1.77 2.08 1.08 0.00 0.00 10 E1_Ac KnownBoundary 1 77.79 31.90 103.25 56.20 60.95 114.59 93.89 69.91 45.75 66.16 150.72 0.00 0.00 48.80 41.78 72.20 142.59 80.09 44.24 80.47 99.96 41.64 60.01 11 ER1d ExonRegion 0 14.42 2.03 7.87 1.77 0.38 1.62 5.23 1.54 4.80 6.02 3.92 2.34 0.71 3.69 1.59 5.47 9.35 6.84 5.89 3.86 1.17 0.07 1.35 12 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1b_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 3.01 0.27 0.57 0.33 1.84 2.69 4.24 0.12 0.44 0.51 0.60 0.19 0.10 0.51 0.32 0.46 1.17 0.74 0.85 0.52 0.34 0.05 0.13 15 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2b ExonRegion 0 8.14 5.86 16.63 11.82 13.42 14.32 7.49 4.68 15.72 15.72 12.20 1.79 1.94 9.63 5.35 7.28 27.43 27.17 19.72 11.52 10.98 1.65 2.43 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.10 0.00 6.83 11.32 4.30 0.64 2.35 5.53 3.40 7.07 12.85 6.65 3.95 11.69 14.73 3.58 9.10 2.66 1.83 3.40 2.15 0.84 1.18 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 0 3.60 6.65 9.55 20.02 3.33 4.51 5.72 8.19 6.06 10.99 26.72 13.15 5.92 9.29 19.90 3.14 4.57 4.46 0.86 1.95 3.05 2.40 1.92 21 E4_Da NovelBoundary 1 12.97 49.93 67.62 125.23 95.50 35.21 79.85 102.60 46.99 65.25 81.39 13.80 13.64 9.48 35.73 32.56 68.26 38.76 69.65 77.08 24.59 16.29 28.51 22 E4b_E5a KnownJunction 1 16.97 32.43 19.28 39.19 32.26 30.04 16.74 9.69 10.16 15.31 46.33 50.27 13.47 7.18 45.99 21.02 22.35 2.28 4.71 0.00 3.15 5.51 4.35 23 ER4b ExonRegion 0 14.82 22.37 18.38 35.78 25.42 27.97 15.89 13.83 9.88 19.50 44.46 38.97 9.38 16.24 31.19 21.55 14.03 5.54 0.00 0.00 3.31 8.33 2.94 24 Ix Intron 0 95.92 49.97 87.42 178.84 116.51 49.10 91.72 86.79 50.48 60.76 39.06 65.69 87.03 32.27 49.62 57.27 43.89 36.45 36.52 57.26 10.02 14.18 31.14 25 Ix_AR1 ActiveIntronRegion 0 33.64 32.70 57.54 141.29 79.92 31.46 57.91 59.61 31.43 49.12 34.69 53.04 49.62 28.61 48.33 51.62 40.35 31.41 26.82 43.25 8.52 11.68 20.71 26 Ix_SR1 SilentIntronRegion 0 10.79 9.22 18.80 64.95 17.12 2.04 2.25 22.33 15.51 30.98 18.06 15.14 13.10 5.17 7.22 13.53 10.60 16.63 13.15 8.38 3.45 2.96 2.56 27 Ix_AR2 ActiveIntronRegion 0 173.87 92.53 161.15 319.99 191.66 87.71 162.36 160.29 92.89 109.84 68.77 113.56 156.65 56.21 85.49 98.92 78.35 62.37 61.71 107.62 17.91 25.54 52.67 28 Ix_SR2 SilentIntronRegion 0 42.41 16.44 34.02 70.68 71.98 24.02 49.36 31.31 18.43 19.25 13.74 34.70 41.88 16.67 25.38 27.00 16.55 16.79 19.60 18.14 3.89 5.85 19.88 29 Ix_AR3 ActiveIntronRegion 0 22.66 10.31 1.54 5.72 33.17 8.27 10.07 2.90 1.04 1.44 5.99 2.01 3.26 1.77 6.92 10.05 8.37 2.07 2.69 6.59 0.62 1.17 2.48 30 E5_Aa NovelBoundary 0 218.41 251.01 648.56 667.95 322.16 411.58 403.38 402.69 238.25 218.52 190.89 142.40 123.53 148.92 121.02 298.38 195.04 408.48 232.48 273.12 73.27 86.09 121.90 31 ER5a ExonRegion 0 39.54 29.83 61.19 126.32 103.99 37.30 67.98 39.17 35.33 40.24 48.03 56.02 53.54 38.13 55.78 32.19 15.90 11.54 16.62 32.46 11.11 8.87 11.77 32 ER5b ExonRegion 0 1.06 0.00 0.00 1.36 0.00 0.92 0.66 0.00 0.00 0.57 1.93 4.33 2.35 1.62 0.00 0.00 3.30 0.00 0.00 1.06 0.00 0.00 0.00