Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM185A Gene 0 16.51 19.41 28.48 19.02 22.38 28.06 18.97 23.22 15.55 16.34 12.90 23.42 15.96 18.76 19.00 13.40 17.14 13.81 14.86 21.05 7.99 5.72 6.41 2 481697 Transcript 0 17.18 2.73 3.29 3.34 4.40 7.12 3.55 4.44 5.02 1.39 2.75 3.82 1.05 5.06 6.17 3.21 1.88 1.26 4.52 1.73 0.00 1.70 4.09 3 442873 Transcript 0 1.70 6.31 2.41 1.56 4.33 2.73 1.99 5.75 4.77 2.65 0.00 0.00 0.00 3.68 2.66 0.00 6.55 1.08 0.00 4.89 7.78 0.00 1.66 4 487807 Transcript 0 5.63 7.50 12.36 3.76 15.79 6.47 13.34 3.12 2.20 8.17 13.95 0.00 0.00 8.95 0.00 3.25 14.03 28.35 0.00 11.89 11.68 0.00 0.00 5 432852 Transcript 0 0.00 1.23 3.31 4.02 3.27 2.23 3.59 4.67 5.48 1.55 0.29 7.81 3.89 5.12 2.41 1.81 3.01 7.64 5.32 4.58 1.00 0.63 1.34 6 420217 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 409231 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 418198 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 413034 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 496790 Transcript 0 5.44 5.49 12.60 8.90 10.19 5.67 7.57 7.48 2.49 4.29 2.00 3.31 1.71 2.96 2.85 4.77 1.47 2.37 2.26 3.29 0.85 0.94 1.70 11 ER1a ExonRegion 0 0.00 2.03 8.58 1.36 4.01 47.68 9.27 0.00 1.24 0.43 8.70 0.00 0.00 1.62 4.35 8.92 11.55 10.62 9.56 2.13 7.71 1.04 2.94 12 E1_Ac KnownBoundary 0 0.00 5.79 0.00 3.70 11.71 91.94 21.86 2.30 1.48 0.00 23.69 0.00 0.00 0.00 5.56 15.12 21.13 3.69 12.71 13.81 13.96 5.39 3.84 13 E1_Ad KnownBoundary 0 3.70 6.71 0.00 0.00 8.49 28.39 9.01 0.00 0.00 0.00 5.37 0.00 0.00 0.00 0.00 17.17 4.77 7.17 19.20 25.57 15.63 18.31 0.00 14 ER1b ExonRegion 0 4.94 3.86 14.46 3.54 15.52 62.41 15.27 2.71 2.06 5.89 18.17 0.00 0.00 15.48 13.06 18.23 23.11 30.80 22.30 19.29 23.14 14.52 9.89 15 E1_Ae KnownBoundary 0 0.00 6.64 14.16 2.06 21.48 2.56 11.04 5.09 3.53 8.27 13.32 0.00 0.00 7.42 0.00 4.36 14.31 17.99 4.61 9.65 9.27 6.12 0.00 16 E1_Af KnownBoundary 0 7.48 10.06 0.00 2.06 4.33 5.79 9.01 0.00 0.00 0.00 5.37 0.00 0.00 3.00 0.00 4.36 0.00 0.00 0.00 6.52 12.60 0.00 0.00 17 ER1c ExonRegion 0 8.47 8.13 20.83 5.45 26.76 71.52 23.83 5.19 3.09 10.90 28.03 0.00 0.00 32.48 17.41 25.26 33.01 43.42 28.67 30.85 33.06 22.92 11.75 18 ER1d ExonRegion 1 13.29 11.98 24.03 7.87 32.85 63.27 23.98 7.11 6.59 12.11 31.79 0.00 0.00 43.31 20.47 24.93 33.38 52.25 28.31 39.13 38.32 23.61 12.73 19 E1_Da KnownBoundary 0 24.08 12.10 17.65 15.92 18.00 32.25 24.73 16.96 13.72 8.86 35.96 0.00 0.00 14.24 16.32 51.10 33.75 27.77 25.22 34.07 7.97 9.00 16.82 20 E1a_E2a KnownJunction 0 5.63 7.50 12.36 3.76 15.79 6.47 13.34 3.12 2.20 8.17 13.95 0.00 0.00 8.95 0.00 3.25 14.03 28.35 0.00 11.89 11.68 0.00 0.00 21 ER1e ExonRegion 1 22.11 15.36 30.09 16.20 32.41 44.21 25.60 16.71 10.43 15.42 44.24 0.00 0.00 44.57 34.82 39.30 42.54 56.46 32.21 54.61 34.77 25.23 18.60 22 ER1f ExonRegion 1 20.46 14.91 32.47 20.44 33.89 40.65 30.67 21.03 12.97 16.06 46.71 2.16 0.00 46.29 36.75 54.98 41.26 56.05 26.54 50.00 30.85 18.40 12.24 23 ER1g ExonRegion 0 6.24 7.97 25.34 18.93 8.65 16.64 14.49 14.65 8.34 12.46 28.03 9.99 9.52 19.54 16.40 21.92 33.26 18.62 16.00 28.68 29.91 3.01 8.10 24 E1_Db KnownBoundary 1 13.93 6.18 22.74 22.21 7.39 8.23 1.85 4.60 11.66 13.00 58.01 0.00 12.50 35.91 8.90 7.52 51.71 24.62 12.89 69.61 44.48 5.69 7.43 25 E1_Ag KnownBoundary 0 3.26 3.35 38.38 21.91 0.00 21.64 9.54 42.10 22.54 18.70 29.06 6.30 0.00 58.45 29.05 35.97 25.06 48.54 34.26 76.25 19.40 28.47 8.11 26 ER1h ExonRegion 1 7.28 4.96 34.23 26.15 2.42 15.53 3.31 30.36 22.00 18.57 53.46 1.76 3.37 53.75 22.76 19.88 46.73 47.23 23.59 74.93 32.64 17.45 10.83 27 ER1i ExonRegion 0 1.90 6.09 25.03 12.46 10.51 33.03 15.83 15.29 13.37 11.51 9.32 5.20 2.83 31.64 25.30 22.35 10.52 32.09 13.15 27.54 9.45 4.49 6.42 28 E1_Dc KnownBoundary 0 7.41 12.83 5.32 1.76 7.39 14.20 15.10 0.00 6.54 3.12 5.32 0.00 6.82 9.71 13.35 8.37 4.39 13.51 0.00 16.17 0.00 0.00 4.35 29 E1c_E2a KnownJunction 0 3.78 9.01 26.23 15.45 16.38 20.61 27.20 18.81 8.85 6.23 14.48 0.00 0.00 10.30 17.80 8.72 12.53 6.51 27.11 21.86 2.59 0.00 3.24 30 E1c_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER1j ExonRegion 0 9.74 16.68 30.72 11.54 15.34 41.20 36.01 19.24 17.04 9.10 12.63 0.00 6.88 23.17 28.63 13.67 13.42 21.31 18.69 30.50 2.35 0.42 5.48 32 E1_Ai KnownBoundary 0 10.59 6.71 13.84 5.29 16.13 13.91 13.03 15.77 4.83 9.51 7.74 6.30 5.84 21.66 13.35 3.67 35.34 23.26 3.95 8.56 0.00 3.12 0.00 33 ER1k ExonRegion 0 7.70 9.84 8.43 1.36 8.99 15.11 12.29 3.04 4.74 5.14 6.11 3.64 4.69 17.09 13.93 4.76 9.90 12.12 0.00 17.02 0.00 2.08 2.70 34 ER1l ExonRegion 0 2.19 5.14 10.99 4.57 1.85 4.64 3.00 5.99 8.03 9.75 5.85 0.47 1.55 14.96 8.66 2.64 7.81 11.07 4.29 12.31 5.38 0.84 1.67 35 E1_Dd NovelBoundary 0 3.78 10.85 28.00 14.12 3.31 5.51 4.15 18.81 9.81 13.86 4.47 0.00 12.99 12.18 9.52 7.52 24.22 22.30 9.22 2.36 2.35 0.00 0.00 36 E1d_E2a KnownJunction 0 3.41 12.63 4.82 3.13 8.66 5.45 3.97 11.50 9.55 5.29 0.00 0.00 0.00 7.36 5.32 0.00 13.09 2.16 0.00 9.78 15.57 0.00 3.33 37 E1e_E2a KnownJunction 0 7.04 21.31 16.62 11.79 19.86 11.24 8.35 11.38 9.06 15.28 12.48 7.05 0.00 35.49 8.90 12.65 20.57 27.77 4.80 8.76 5.87 6.12 0.00 38 ER1m ExonRegion 0 3.46 15.34 13.98 9.48 9.85 4.67 4.69 9.82 8.20 13.61 9.23 3.15 4.69 27.24 11.08 8.92 19.36 23.26 10.14 5.03 4.41 3.79 0.00 39 E2_Aa NovelBoundary 0 0.00 9.27 3.25 18.28 20.88 5.22 6.67 8.63 2.72 1.16 7.00 7.65 0.00 2.24 0.00 0.00 8.32 0.00 7.91 3.26 0.00 0.00 0.00 40 ER2a ExonRegion 0 16.97 19.89 45.65 32.36 27.15 44.31 36.11 37.96 35.85 38.24 23.81 34.64 27.54 44.44 28.96 13.89 37.30 27.65 33.91 37.85 11.72 8.94 8.36 41 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E2a_E4a KnownJunction 1 21.63 19.54 63.63 28.17 12.56 32.59 21.29 24.52 23.26 31.78 16.06 24.61 54.05 19.48 16.81 15.89 27.40 18.99 8.85 35.47 0.00 6.06 15.96 43 E3_Aa NovelBoundary 0 33.64 33.22 36.43 37.79 61.80 23.40 52.33 45.06 11.55 15.55 11.95 19.21 0.00 14.36 11.00 7.52 9.16 3.73 0.00 20.01 0.00 2.27 0.00 44 ER3a ExonRegion 0 10.89 10.99 25.19 17.80 20.37 11.35 15.13 14.96 4.97 8.58 4.00 6.63 3.41 5.92 5.69 9.55 2.93 4.74 4.51 6.58 1.70 1.88 3.40 45 E3_Da NovelBoundary 0 19.19 30.13 88.58 53.44 11.63 18.97 9.45 20.00 12.27 14.94 40.33 5.70 23.54 9.18 10.51 33.84 39.46 60.85 31.25 11.63 42.38 4.65 24.41 46 ER4a ExonRegion 0 26.32 16.71 67.72 28.74 3.72 29.66 12.09 37.88 27.49 37.55 17.56 14.31 34.26 17.23 25.73 11.11 36.60 19.20 8.45 26.92 6.61 3.62 8.55 47 ER4b ExonRegion 1 13.03 8.63 39.56 25.70 0.00 10.37 4.09 33.58 29.24 26.15 21.79 19.11 14.41 22.99 22.34 6.96 32.40 13.30 12.33 20.55 5.29 7.59 4.99 48 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER5a ExonRegion 1 17.54 17.86 42.46 23.86 19.87 38.33 32.22 34.28 23.02 26.47 12.26 43.54 33.07 19.92 17.30 14.43 21.44 8.63 20.60 19.52 2.03 7.49 9.51 50 E5a_E6a KnownJunction 1 36.67 19.93 31.99 15.68 31.24 39.41 21.42 35.12 19.59 16.63 10.00 54.92 26.30 19.42 18.17 8.72 13.46 1.66 8.38 9.78 0.00 5.69 8.62 51 ER6a ExonRegion 1 28.02 23.73 35.42 18.63 51.99 50.17 36.72 45.15 24.47 27.20 19.47 65.56 54.94 33.95 47.94 13.09 19.96 5.41 13.58 31.36 6.72 11.81 11.40 52 E6_Da NovelBoundary 0 20.60 2.70 12.60 6.76 0.00 2.90 4.33 7.43 6.66 3.33 4.84 18.61 13.64 2.47 6.30 0.00 4.77 0.00 0.00 6.01 0.00 0.00 4.35 53 E6a_E7a KnownJunction 1 17.19 21.64 29.09 14.08 53.06 46.00 37.98 40.09 21.76 27.21 16.53 30.01 60.55 23.43 25.96 16.83 8.42 7.59 19.20 31.51 11.68 12.12 16.13 54 ER7a ExonRegion 1 13.27 24.95 32.68 20.76 18.09 29.49 20.95 38.03 25.68 23.28 13.69 50.65 28.73 33.38 24.66 20.99 20.11 14.19 20.67 28.46 8.15 6.10 9.36 55 E7a_E8a KnownJunction 0 0.00 0.00 1.66 3.63 0.00 2.90 0.00 2.05 4.46 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 3.84 56 E7a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 E8_Aa NovelBoundary 0 180.55 137.34 265.96 265.20 93.72 129.64 160.71 209.93 226.30 225.64 38.01 66.02 58.92 17.95 42.28 100.49 126.13 220.45 62.87 184.53 67.03 44.27 112.68 58 ER8a ExonRegion 0 34.36 5.45 4.91 3.06 8.80 11.35 7.10 6.82 5.58 2.78 0.82 7.65 2.10 10.12 12.35 6.42 3.76 2.52 4.24 3.46 0.00 3.39 4.34 59 E8_Da NovelBoundary 0 161.29 39.27 29.15 38.99 18.93 20.50 23.14 16.84 24.39 17.16 12.74 22.96 20.45 9.18 10.75 21.62 25.15 16.66 27.39 16.62 11.74 2.45 8.71 60 I8_SR2 SilentIntronRegion 0 1.66 1.59 2.38 2.91 3.84 2.87 5.34 0.34 0.24 0.45 3.02 7.81 17.24 0.70 2.52 2.33 1.72 0.84 0.00 6.38 1.15 0.54 1.92 61 ER9a ExonRegion 0 8.88 20.96 23.79 7.27 29.58 54.91 28.65 43.21 20.76 18.25 24.91 38.00 21.11 23.69 22.97 8.50 21.09 9.14 17.78 23.05 9.37 3.65 4.40 62 E9_Da KnownBoundary 0 13.48 27.96 29.24 18.45 48.22 48.84 45.00 56.52 23.99 15.12 10.48 52.97 39.45 31.20 25.84 3.16 8.88 11.65 23.81 17.71 11.43 0.00 0.00 63 ER9b ExonRegion 0 38.76 37.12 35.73 31.95 44.03 48.38 32.51 36.56 21.03 20.30 21.95 59.30 40.32 37.85 27.08 15.34 28.54 19.49 24.29 40.30 10.86 6.52 10.62 64 E9_Db NovelBoundary 1 30.30 38.15 50.21 40.35 15.62 10.28 69.47 18.65 18.87 10.42 7.63 54.77 77.92 16.19 22.75 34.18 22.35 2.11 23.25 19.94 8.40 10.47 13.06 65 E9b_E10a KnownJunction 0 31.56 51.77 31.55 40.82 68.76 57.24 44.03 28.67 28.50 25.04 17.58 51.77 39.93 44.44 33.99 31.27 30.29 19.86 31.15 34.83 7.72 2.69 15.79 66 E10_Aa NovelBoundary 0 3.78 11.91 1.77 16.88 4.24 0.00 8.08 6.98 3.41 2.71 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 3.76 5.62 0.00 0.00 0.00 67 ER10a ExonRegion 0 17.99 56.78 39.11 28.51 58.48 78.56 37.07 35.35 29.16 21.96 20.20 63.75 37.82 38.22 36.13 23.54 40.73 18.81 29.34 43.58 19.05 12.10 12.03 68 E10_Da KnownBoundary 1 28.15 45.26 47.78 28.27 48.98 95.57 37.94 36.88 23.47 13.86 14.11 69.02 20.62 31.84 57.48 19.65 35.16 7.88 17.60 27.42 16.43 14.02 0.00 69 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.84 0.00 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER10b ExonRegion 1 24.32 29.83 46.16 35.89 28.33 52.14 30.43 41.31 21.07 15.94 20.31 93.38 12.97 20.48 27.87 16.73 34.89 11.41 8.74 41.22 10.80 11.81 4.55 71 E10_Db KnownBoundary 1 41.86 52.56 44.91 45.78 40.58 73.54 36.79 48.51 18.49 24.66 34.43 71.87 12.66 26.72 22.75 11.88 21.13 12.52 8.47 54.84 3.03 10.96 12.89 72 ER10c ExonRegion 0 35.64 47.62 41.91 31.80 49.00 46.57 29.55 39.77 19.24 24.74 18.00 49.14 31.60 15.07 27.38 17.36 26.03 11.20 24.45 21.96 9.81 9.87 9.58 73 E10_Dc KnownBoundary 0 35.56 47.69 27.76 41.82 63.33 40.09 19.21 37.58 19.44 25.17 22.32 6.30 6.82 27.19 61.19 24.87 12.90 25.99 52.14 23.52 21.19 12.00 13.06 74 ER10d ExonRegion 0 17.97 17.56 25.23 14.98 18.77 21.96 14.14 16.71 17.85 15.42 8.14 6.76 12.40 11.50 19.92 11.75 6.38 7.41 11.26 18.75 3.89 4.54 4.85 75 ER10e ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 I10_AR2 ActiveIntronRegion 0 2.12 9.34 6.91 12.58 18.49 9.09 6.56 4.48 8.93 1.25 1.93 18.30 5.12 8.27 2.90 2.16 3.30 2.94 5.65 5.71 0.00 0.00 1.33 77 ER11a ExonRegion 1 0.00 2.47 6.62 8.04 6.53 4.45 7.19 9.33 8.12 3.11 0.59 15.62 7.79 5.99 4.82 3.63 6.01 15.29 10.64 9.16 2.01 1.26 2.67